RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 COX6CP09669 75 aa10.22□□□□□ -0.77
SCFD1-203ENST00000458591 VSIG2Q96IQ7 327 aa10.22□□□□□ -0.77
SCFD1-203ENST00000458591 CDKN2A-AS1Q9UH64 79 aa10.22□□□□□ -0.77
SCFD1-203ENST00000458591 TRAV8-4A0A0B4J246 113 aa10.21□□□□□ -0.77
SCFD1-203ENST00000458591 ZNF415Q09FC8 603 aa10.21□□□□□ -0.77
SCFD1-203ENST00000458591 GAGE2BQ13066 116 aa10.21□□□□□ -0.77
SCFD1-203ENST00000458591 GAGE2EQ4V326 116 aa10.21□□□□□ -0.77
SCFD1-203ENST00000458591 UBE2WQ96B02 151 aa10.21□□□□□ -0.77
SCFD1-203ENST00000458591 ZNF625Q96I27 306 aaPredicted RBP10.21□□□□□ -0.77
SCFD1-203ENST00000458591 GAGE2DQ9UEU5 116 aa10.21□□□□□ -0.77
SCFD1-203ENST00000458591 IGHV3-53P01767 116 aa10.21□□□□□ -0.78
SCFD1-203ENST00000458591 ICOSQ9Y6W8 199 aa10.21□□□□□ -0.78
SCFD1-203ENST00000458591 C2CD3Q4AC94 2353 aa10.21□□□□□ -0.78
SCFD1-203ENST00000458591 A0A1W2PRX2 142 aa10.2□□□□□ -0.78
SCFD1-203ENST00000458591 J3QLI3 93 aa10.2□□□□□ -0.78
SCFD1-203ENST00000458591 TEX49A0A1B0GTD5 131 aa10.19□□□□□ -0.78
SCFD1-203ENST00000458591 LINC00694P0DN24 101 aa10.19□□□□□ -0.78
SCFD1-203ENST00000458591 MIAQ16674 131 aa10.19□□□□□ -0.78
SCFD1-203ENST00000458591 DYNLRB2Q8TF09 96 aa10.19□□□□□ -0.78
SCFD1-203ENST00000458591 CLEC2BQ92478 149 aa10.19□□□□□ -0.78
SCFD1-203ENST00000458591 YAE1D1Q9NRH1 226 aa10.19□□□□□ -0.78
SCFD1-203ENST00000458591 TINCRA0A1B0GVN0 87 aa10.19□□□□□ -0.78
SCFD1-203ENST00000458591 A8MTW9 85 aa10.19□□□□□ -0.78
SCFD1-203ENST00000458591 DEFB114Q30KQ6 69 aa10.19□□□□□ -0.78
SCFD1-203ENST00000458591 C2orf82Q6UX34 121 aa10.19□□□□□ -0.78
SCFD1-203ENST00000458591 SPANXA1Q9NS26 97 aa10.19□□□□□ -0.78
SCFD1-203ENST00000458591 H3BT86 120 aa10.18□□□□□ -0.78
SCFD1-203ENST00000458591 CR1P17927 2039 aa10.17□□□□□ -0.78
SCFD1-203ENST00000458591 TMEM101Q96IK0 257 aa10.17□□□□□ -0.78
SCFD1-203ENST00000458591 BBC3Q96PG8 261 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-203ENST00000458591 JMJD1CQ15652 2540 aa10.17□□□□□ -0.78
SCFD1-203ENST00000458591 GAGE5Q13069 117 aa10.17□□□□□ -0.78
SCFD1-203ENST00000458591 GAGE6Q13070 117 aa10.17□□□□□ -0.78
SCFD1-203ENST00000458591 ODF3L2Q3SX64 289 aa10.17□□□□□ -0.78
SCFD1-203ENST00000458591 Q6Q795 121 aa10.16□□□□□ -0.78
SCFD1-203ENST00000458591 C1orf158Q8N1D5 194 aa10.16□□□□□ -0.78
SCFD1-203ENST00000458591 TRGV1A0A0A0MS02 117 aa10.16□□□□□ -0.78
SCFD1-203ENST00000458591 TRAV4A0A0B4J268 109 aa10.16□□□□□ -0.78
SCFD1-203ENST00000458591 RS1O15537 224 aa10.16□□□□□ -0.78
SCFD1-203ENST00000458591 TTC32Q5I0X7 151 aa10.16□□□□□ -0.78
SCFD1-203ENST00000458591 PEMTQ9UBM1 199 aa10.16□□□□□ -0.78
SCFD1-203ENST00000458591 USP24Q9UPU5 2620 aa10.16□□□□□ -0.78
SCFD1-203ENST00000458591 TIMM17BO60830 172 aa10.15□□□□□ -0.78
SCFD1-203ENST00000458591 CRLF1O75462 422 aa10.15□□□□□ -0.78
SCFD1-203ENST00000458591 IFITM1P13164 125 aa10.15□□□□□ -0.78
SCFD1-203ENST00000458591 NDUFV3P56181 108 aaKnown RBP10.15□□□□□ -0.78
SCFD1-203ENST00000458591 H7C423 109 aa10.15□□□□□ -0.79
SCFD1-203ENST00000458591 INSP01308 110 aa10.15□□□□□ -0.79
SCFD1-203ENST00000458591 BEAN1Q3B7T3 259 aa10.15□□□□□ -0.79
SCFD1-203ENST00000458591 PIK3CD-AS1Q5SR53 167 aa10.15□□□□□ -0.79
SCFD1-203ENST00000458591 DGAT2L7PQ6IED9 249 aa10.15□□□□□ -0.79
SCFD1-203ENST00000458591 C4orf3Q8WVX3 66 aa10.15□□□□□ -0.79
SCFD1-203ENST00000458591 Q96MF0 132 aa10.15□□□□□ -0.79
SCFD1-203ENST00000458591 SETXQ7Z333 2677 aaKnown RBP10.14□□□□□ -0.79
SCFD1-203ENST00000458591 PLA2G2AP14555 144 aa10.14□□□□□ -0.79
SCFD1-203ENST00000458591 Q6ZTI0 123 aa10.14□□□□□ -0.79
SCFD1-203ENST00000458591 SVIPQ8NHG7 77 aa10.14□□□□□ -0.79
SCFD1-203ENST00000458591 CCDC168Q8NDH2 2452 aa10.14□□□□□ -0.79
SCFD1-203ENST00000458591 TRAV13-1A0A0B4J241 112 aa10.14□□□□□ -0.79
SCFD1-203ENST00000458591 NTM-AS1Q6ZSK4 140 aa10.14□□□□□ -0.79
SCFD1-203ENST00000458591 C15orf53Q8NAA6 179 aa10.14□□□□□ -0.79
SCFD1-203ENST00000458591 APCP25054 2843 aa10.14□□□□□ -0.79
SCFD1-203ENST00000458591 LST1O00453 97 aa10.13□□□□□ -0.79
SCFD1-203ENST00000458591 UBR5O95071 2799 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-203ENST00000458591 LINC00242Q5T6M2 205 aa10.13□□□□□ -0.79
SCFD1-203ENST00000458591 MRPL23Q16540 153 aaKnown RBP10.12□□□□□ -0.79
SCFD1-203ENST00000458591 Q8N2B8 174 aa10.12□□□□□ -0.79
SCFD1-203ENST00000458591 WFDC10AQ9H1F0 79 aa10.12□□□□□ -0.79
SCFD1-203ENST00000458591 Q9H8V8 135 aa10.12□□□□□ -0.79
SCFD1-203ENST00000458591 DNAJC30Q96LL9 226 aa10.12□□□□□ -0.79
SCFD1-203ENST00000458591 CITED2Q99967 270 aaPredicted RBP10.12□□□□□ -0.79
SCFD1-203ENST00000458591 GAGE12JA6NER3 117 aa10.11□□□□□ -0.79
SCFD1-203ENST00000458591 NHLRC4P0CG21 123 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-203ENST00000458591 GAGE4Q13068 117 aa10.11□□□□□ -0.79
SCFD1-203ENST00000458591 CIRBPQ14011 172 aaKnown RBP10.11□□□□□ -0.79
SCFD1-203ENST00000458591 FAM240AA0A1B0GVK7 77 aa10.11□□□□□ -0.79
SCFD1-203ENST00000458591 STHQ8IWL8 128 aa10.11□□□□□ -0.79
SCFD1-203ENST00000458591 ITPR3Q14573 2671 aa10.11□□□□□ -0.79
SCFD1-203ENST00000458591 NDUFA1O15239 70 aa10.1□□□□□ -0.79
SCFD1-203ENST00000458591 SOSTDC1Q6X4U4 206 aa10.1□□□□□ -0.79
SCFD1-203ENST00000458591 SS18L2Q9UHA2 77 aa10.1□□□□□ -0.79
SCFD1-203ENST00000458591 LOC100131303A0A0U1RQF7 123 aa10.1□□□□□ -0.79
SCFD1-203ENST00000458591 B5MCH6 92 aa10.1□□□□□ -0.79
SCFD1-203ENST00000458591 GAGE7O76087 117 aa10.09□□□□□ -0.79
SCFD1-203ENST00000458591 GAGE12FP0CL80 117 aa10.09□□□□□ -0.79
SCFD1-203ENST00000458591 GAGE12GP0CL81 117 aa10.09□□□□□ -0.79
SCFD1-203ENST00000458591 GAGE12IP0CL82 117 aa10.09□□□□□ -0.79
SCFD1-203ENST00000458591 TIRAPP58753 221 aa10.09□□□□□ -0.79
SCFD1-203ENST00000458591 DEFB113Q30KQ7 82 aa10.09□□□□□ -0.79
SCFD1-203ENST00000458591 LINC00308Q8TCZ7 52 aa10.09□□□□□ -0.79
SCFD1-203ENST00000458591 COPS9Q8WXC6 57 aa10.09□□□□□ -0.79
SCFD1-203ENST00000458591 NOP10Q9NPE3 64 aaKnown RBP10.09□□□□□ -0.79
SCFD1-203ENST00000458591 IGLV5-45A0A087WSX0 123 aa10.08□□□□□ -0.8
SCFD1-203ENST00000458591 DEFB121Q5J5C9 76 aa10.08□□□□□ -0.8
SCFD1-203ENST00000458591 SMIM1B2RUZ4 78 aa10.08□□□□□ -0.8
SCFD1-203ENST00000458591 HIST2H2BCQ6DN03 193 aa10.08□□□□□ -0.8
SCFD1-203ENST00000458591 KRTAP1-3Q8IUG1 177 aa10.07□□□□□ -0.8
SCFD1-203ENST00000458591 IL17DQ8TAD2 202 aa10.07□□□□□ -0.8
SCFD1-203ENST00000458591 ESM1Q9NQ30 184 aa10.07□□□□□ -0.8
SCFD1-203ENST00000458591 IGKV3OR2-268A0A0C4DH90 116 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms