RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 CHCHD1Q96BP2 118 aaKnown RBP11.32□□□□□ -0.6
TRIM39-211ENST00000458516 TMEM101Q96IK0 257 aa11.32□□□□□ -0.6
TRIM39-211ENST00000458516 PRR34Q9NV39 138 aa11.32□□□□□ -0.6
TRIM39-211ENST00000458516 DNAH2Q9P225 4427 aa11.32□□□□□ -0.6
TRIM39-211ENST00000458516 SERF1AO75920 110 aa11.31□□□□□ -0.6
TRIM39-211ENST00000458516 G0S2P27469 103 aa11.31□□□□□ -0.6
TRIM39-211ENST00000458516 CLPSL2Q6UWE3 100 aa11.31□□□□□ -0.6
TRIM39-211ENST00000458516 ENHOQ6UWT2 76 aa11.31□□□□□ -0.6
TRIM39-211ENST00000458516 Q6ZUT4 128 aa11.31□□□□□ -0.6
TRIM39-211ENST00000458516 LINC00269Q8N2A0 174 aa11.31□□□□□ -0.6
TRIM39-211ENST00000458516 CDC42SE2Q9NRR3 84 aa11.31□□□□□ -0.6
TRIM39-211ENST00000458516 PYGO1Q9Y3Y4 419 aa11.31□□□□□ -0.6
TRIM39-211ENST00000458516 PMCHL1Q16048 86 aa11.3□□□□□ -0.6
TRIM39-211ENST00000458516 DGAT2L7PQ6IED9 249 aa11.3□□□□□ -0.6
TRIM39-211ENST00000458516 UBE2WQ96B02 151 aa11.3□□□□□ -0.6
TRIM39-211ENST00000458516 Q9HAA7 133 aa11.3□□□□□ -0.6
TRIM39-211ENST00000458516 RYR3Q15413 4870 aa11.3□□□□□ -0.6
TRIM39-211ENST00000458516 HBDP02042 147 aa11.29□□□□□ -0.6
TRIM39-211ENST00000458516 CRPP02741 224 aa11.29□□□□□ -0.6
TRIM39-211ENST00000458516 MRPS36P82909 103 aaKnown RBP11.29□□□□□ -0.6
TRIM39-211ENST00000458516 REG3AQ06141 175 aa11.29□□□□□ -0.6
TRIM39-211ENST00000458516 C6orf223Q8N319 242 aa11.29□□□□□ -0.6
TRIM39-211ENST00000458516 ZNF664Q8N3J9 261 aa11.29□□□□□ -0.6
TRIM39-211ENST00000458516 OPRPNQ99935 248 aaPredicted RBP11.29□□□□□ -0.6
TRIM39-211ENST00000458516 FRAS1Q86XX4 4008 aa11.29□□□□□ -0.6
TRIM39-211ENST00000458516 DNAH10Q8IVF4 4471 aa11.29□□□□□ -0.6
TRIM39-211ENST00000458516 IGLV4-3A0A075B6K6 122 aa11.28□□□□□ -0.6
TRIM39-211ENST00000458516 TRAV8-3A0A0A6YYJ7 113 aa11.28□□□□□ -0.6
TRIM39-211ENST00000458516 IGIPA6NJ69 53 aa11.28□□□□□ -0.6
TRIM39-211ENST00000458516 NUPR1O60356 82 aa11.28□□□□□ -0.6
TRIM39-211ENST00000458516 RNASE13Q5GAN3 156 aaKnown RBP11.28□□□□□ -0.6
TRIM39-211ENST00000458516 LINC01549A6NIU2 74 aa11.27□□□□□ -0.61
TRIM39-211ENST00000458516 HSBP1O75506 76 aa11.27□□□□□ -0.61
TRIM39-211ENST00000458516 C1orf134Q5TEV5 83 aa11.27□□□□□ -0.61
TRIM39-211ENST00000458516 Q6ZRN7 208 aaPredicted RBP11.27□□□□□ -0.61
TRIM39-211ENST00000458516 TIMM17AQ99595 171 aa11.27□□□□□ -0.61
TRIM39-211ENST00000458516 DNAH17Q9UFH2 4485 aa11.26□□□□□ -0.61
TRIM39-211ENST00000458516 IGKV3OR2-268A0A0C4DH90 116 aa11.26□□□□□ -0.61
TRIM39-211ENST00000458516 NPSP0C0P6 89 aa11.26□□□□□ -0.61
TRIM39-211ENST00000458516 MIAQ16674 131 aa11.26□□□□□ -0.61
TRIM39-211ENST00000458516 PDZD11Q5EBL8 140 aa11.26□□□□□ -0.61
TRIM39-211ENST00000458516 ERASQ7Z444 233 aa11.26□□□□□ -0.61
TRIM39-211ENST00000458516 SCGB3A1Q96QR1 104 aa11.26□□□□□ -0.61
TRIM39-211ENST00000458516 NFE4Q86UQ8 179 aa11.25□□□□□ -0.61
TRIM39-211ENST00000458516 FAM19A2Q8N3H0 131 aa11.25□□□□□ -0.61
TRIM39-211ENST00000458516 TMEM141Q96I45 108 aa11.25□□□□□ -0.61
TRIM39-211ENST00000458516 RTL8CO15255 209 aa11.24□□□□□ -0.61
TRIM39-211ENST00000458516 COA6Q5JTJ3 125 aaKnown RBP11.24□□□□□ -0.61
TRIM39-211ENST00000458516 LINC00173Q6ZV60 143 aa11.24□□□□□ -0.61
TRIM39-211ENST00000458516 IGKV2D-24A0A075B6R9 120 aa11.23□□□□□ -0.61
TRIM39-211ENST00000458516 LINC00959A0A1B0GUT2 108 aa11.23□□□□□ -0.61
TRIM39-211ENST00000458516 NDUFA6P56556 154 aa11.23□□□□□ -0.61
TRIM39-211ENST00000458516 RMI2Q96E14 147 aa11.23□□□□□ -0.61
TRIM39-211ENST00000458516 AMELXQ99217 191 aa11.23□□□□□ -0.61
TRIM39-211ENST00000458516 IGLV10-54A0A075B6I4 117 aa11.22□□□□□ -0.61
TRIM39-211ENST00000458516 TRAV8-4A0A0B4J246 113 aa11.22□□□□□ -0.61
TRIM39-211ENST00000458516 ZC2HC1BQ5TFG8 222 aa11.22□□□□□ -0.61
TRIM39-211ENST00000458516 KRTAP26-1Q6PEX3 210 aa11.22□□□□□ -0.61
TRIM39-211ENST00000458516 C1orf43Q9BWL3 253 aa11.22□□□□□ -0.61
TRIM39-211ENST00000458516 IFITM10A6NMD0 228 aa11.21□□□□□ -0.61
TRIM39-211ENST00000458516 Q6ZN92 141 aa11.21□□□□□ -0.61
TRIM39-211ENST00000458516 TEX43Q6ZNM6 134 aa11.21□□□□□ -0.61
TRIM39-211ENST00000458516 TRAV13-1A0A0B4J241 112 aa11.2□□□□□ -0.62
TRIM39-211ENST00000458516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-211ENST00000458516 PAPPA-AS1Q5QFB9 102 aa11.2□□□□□ -0.62
TRIM39-211ENST00000458516 BAALCQ8WXS3 180 aa11.2□□□□□ -0.62
TRIM39-211ENST00000458516 CHCHD10Q8WYQ3 142 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-211ENST00000458516 TM2D2Q9BX73 214 aa11.2□□□□□ -0.62
TRIM39-211ENST00000458516 VCX2Q9H322 139 aa11.2□□□□□ -0.62
TRIM39-211ENST00000458516 FAT2Q9NYQ8 4349 aa11.19□□□□□ -0.62
TRIM39-211ENST00000458516 ATP5LO75964 103 aa11.19□□□□□ -0.62
TRIM39-211ENST00000458516 SS18Q15532 418 aa11.19□□□□□ -0.62
TRIM39-211ENST00000458516 MAPKAPK5-AS1Q8N8E1 139 aa11.19□□□□□ -0.62
TRIM39-211ENST00000458516 KRTAP17-1Q9BYP8 105 aa11.19□□□□□ -0.62
TRIM39-211ENST00000458516 COX11Q9Y6N1 276 aa11.19□□□□□ -0.62
TRIM39-211ENST00000458516 CCL25O15444 150 aa11.18□□□□□ -0.62
TRIM39-211ENST00000458516 C2orf88Q9BSF0 95 aa11.18□□□□□ -0.62
TRIM39-211ENST00000458516 GAGE12HA6NDE8 117 aa11.17□□□□□ -0.62
TRIM39-211ENST00000458516 PSCAO43653 123 aa11.17□□□□□ -0.62
TRIM39-211ENST00000458516 LEPROTL1O95214 131 aa11.17□□□□□ -0.62
TRIM39-211ENST00000458516 UBE2D1P51668 147 aa11.17□□□□□ -0.62
TRIM39-211ENST00000458516 IFI27L1Q96BM0 104 aa11.17□□□□□ -0.62
TRIM39-211ENST00000458516 XCL1P47992 114 aa11.16□□□□□ -0.62
TRIM39-211ENST00000458516 FOXI1Q12951 378 aa11.16□□□□□ -0.62
TRIM39-211ENST00000458516 PMVKQ15126 192 aa11.16□□□□□ -0.62
TRIM39-211ENST00000458516 FABP4P15090 132 aa11.15□□□□□ -0.62
TRIM39-211ENST00000458516 TNP2Q05952 138 aa11.15□□□□□ -0.62
TRIM39-211ENST00000458516 LINC00242Q5T6M2 205 aa11.15□□□□□ -0.62
TRIM39-211ENST00000458516 CST9LQ9H4G1 147 aa11.15□□□□□ -0.62
TRIM39-211ENST00000458516 LRCOL1A6NCL2 159 aa11.14□□□□□ -0.63
TRIM39-211ENST00000458516 PRSS29PA6NIE9 313 aa11.14□□□□□ -0.63
TRIM39-211ENST00000458516 CD164L2Q6UWJ8 174 aa11.14□□□□□ -0.63
TRIM39-211ENST00000458516 LINC00336Q6ZUF6 198 aa11.14□□□□□ -0.63
TRIM39-211ENST00000458516 FAM19A3Q7Z5A8 133 aa11.14□□□□□ -0.63
TRIM39-211ENST00000458516 HSPB8Q9UJY1 196 aa11.14□□□□□ -0.63
TRIM39-211ENST00000458516 WFDC2Q14508 124 aa11.13□□□□□ -0.63
TRIM39-211ENST00000458516 PACRGQ96M98 296 aaPredicted RBP11.13□□□□□ -0.63
TRIM39-211ENST00000458516 A0A0J9YXV3 536 aa11.12□□□□□ -0.63
TRIM39-211ENST00000458516 S100A6P06703 90 aa11.12□□□□□ -0.63
TRIM39-211ENST00000458516 COX6A2Q02221 97 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms