RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 IGSF10Q6WRI0 2623 aa7.87□□□□□ -1.15
RFX3-211ENST00000458034 PRSS2P07478 247 aa7.86□□□□□ -1.15
RFX3-211ENST00000458034 TMEM101Q96IK0 257 aa7.86□□□□□ -1.15
RFX3-211ENST00000458034 CITED2Q99967 270 aaPredicted RBP7.86□□□□□ -1.15
RFX3-211ENST00000458034 ADARB2-AS1A8MUL3 147 aa7.85□□□□□ -1.15
RFX3-211ENST00000458034 H7C2G1 150 aa7.85□□□□□ -1.15
RFX3-211ENST00000458034 H7C423 109 aa7.85□□□□□ -1.15
RFX3-211ENST00000458034 UBE2L6O14933 153 aa7.85□□□□□ -1.15
RFX3-211ENST00000458034 SLC25A20O43772 301 aa7.85□□□□□ -1.15
RFX3-211ENST00000458034 LCE3BQ5TA77 95 aa7.85□□□□□ -1.15
RFX3-211ENST00000458034 C11orf44Q8N8P7 122 aa7.85□□□□□ -1.15
RFX3-211ENST00000458034 GTSF1LQ9H1H1 148 aa7.85□□□□□ -1.15
RFX3-211ENST00000458034 ESM1Q9NQ30 184 aa7.85□□□□□ -1.15
RFX3-211ENST00000458034 Q9UF83 564 aa7.85□□□□□ -1.15
RFX3-211ENST00000458034 ACACBO00763 2458 aa7.84□□□□□ -1.15
RFX3-211ENST00000458034 C9JAW5 83 aa7.84□□□□□ -1.15
RFX3-211ENST00000458034 TMEM262E9PQX1 116 aa7.84□□□□□ -1.15
RFX3-211ENST00000458034 Q6ZTI0 123 aa7.84□□□□□ -1.15
RFX3-211ENST00000458034 TMEM243Q9BU79 118 aa7.84□□□□□ -1.15
RFX3-211ENST00000458034 CDKN2A-AS1Q9UH64 79 aa7.84□□□□□ -1.15
RFX3-211ENST00000458034 ICOSQ9Y6W8 199 aa7.84□□□□□ -1.15
RFX3-211ENST00000458034 ASH1LQ9NR48 2969 aaKnown RBP7.83□□□□□ -1.16
RFX3-211ENST00000458034 IGLV5-39A0A0G2JS06 123 aa7.83□□□□□ -1.16
RFX3-211ENST00000458034 GAGE12JA6NER3 117 aa7.83□□□□□ -1.16
RFX3-211ENST00000458034 EIF4EBP3O60516 100 aaPredicted RBP7.83□□□□□ -1.16
RFX3-211ENST00000458034 HERV-K104P63124 156 aa7.83□□□□□ -1.16
RFX3-211ENST00000458034 GAGE4Q13068 117 aa7.83□□□□□ -1.16
RFX3-211ENST00000458034 GAGE5Q13069 117 aa7.83□□□□□ -1.16
RFX3-211ENST00000458034 LINC01620Q4KN68 170 aa7.83□□□□□ -1.16
RFX3-211ENST00000458034 ANKRD29Q8N6D5 301 aa7.83□□□□□ -1.16
RFX3-211ENST00000458034 LINC01006Q8NI28 216 aa7.83□□□□□ -1.16
RFX3-211ENST00000458034 LINC01600Q96MT4 127 aa7.83□□□□□ -1.16
RFX3-211ENST00000458034 CFAP46Q8IYW2 2715 aa7.82□□□□□ -1.16
RFX3-211ENST00000458034 TRBV10-2A0A0K0K1G8 114 aa7.82□□□□□ -1.16
RFX3-211ENST00000458034 TRBV6-4A0A1B0GX49 114 aa7.82□□□□□ -1.16
RFX3-211ENST00000458034 NDUFA7O95182 113 aa7.82□□□□□ -1.16
RFX3-211ENST00000458034 IGLV1-51P01701 117 aa7.82□□□□□ -1.16
RFX3-211ENST00000458034 INSL3P51460 131 aa7.82□□□□□ -1.16
RFX3-211ENST00000458034 LINC00242Q5T6M2 205 aa7.82□□□□□ -1.16
RFX3-211ENST00000458034 KRTAP4-12Q9BQ66 201 aa7.82□□□□□ -1.16
RFX3-211ENST00000458034 OVOL2Q9BRP0 275 aa7.82□□□□□ -1.16
RFX3-211ENST00000458034 NOP10Q9NPE3 64 aaKnown RBP7.82□□□□□ -1.16
RFX3-211ENST00000458034 FAM208BQ5VWN6 2430 aa7.82□□□□□ -1.16
RFX3-211ENST00000458034 ZFHX3Q15911 3703 aa7.82□□□□□ -1.16
RFX3-211ENST00000458034 TRGV2A0A075B6R0 118 aa7.81□□□□□ -1.16
RFX3-211ENST00000458034 TRIAP1O43715 76 aa7.81□□□□□ -1.16
RFX3-211ENST00000458034 ADAMTSL4-AS1Q5T5F5 129 aa7.81□□□□□ -1.16
RFX3-211ENST00000458034 HIST2H2BDQ6DRA6 164 aa7.81□□□□□ -1.16
RFX3-211ENST00000458034 CARD19Q96LW7 228 aa7.81□□□□□ -1.16
RFX3-211ENST00000458034 PPDPFQ9H3Y8 114 aa7.81□□□□□ -1.16
RFX3-211ENST00000458034 CDC42SE2Q9NRR3 84 aa7.81□□□□□ -1.16
RFX3-211ENST00000458034 CREBBPQ92793 2442 aa7.8□□□□□ -1.16
RFX3-211ENST00000458034 TRGV4A0A0C4DH28 118 aa7.8□□□□□ -1.16
RFX3-211ENST00000458034 H3BT86 120 aa7.8□□□□□ -1.16
RFX3-211ENST00000458034 GAGE7O76087 117 aa7.8□□□□□ -1.16
RFX3-211ENST00000458034 GAGE12FP0CL80 117 aa7.8□□□□□ -1.16
RFX3-211ENST00000458034 GAGE12GP0CL81 117 aa7.8□□□□□ -1.16
RFX3-211ENST00000458034 GAGE12IP0CL82 117 aa7.8□□□□□ -1.16
RFX3-211ENST00000458034 RPL35AP18077 110 aaKnown RBP7.8□□□□□ -1.16
RFX3-211ENST00000458034 RPL13AP40429 203 aaKnown RBP7.8□□□□□ -1.16
RFX3-211ENST00000458034 COX6A2Q02221 97 aa7.8□□□□□ -1.16
RFX3-211ENST00000458034 Q9H8V8 135 aa7.8□□□□□ -1.16
RFX3-211ENST00000458034 USP9YO00507 2555 aaPredicted RBP7.8□□□□□ -1.16
RFX3-211ENST00000458034 MYO18BQ8IUG5 2567 aa7.8□□□□□ -1.16
RFX3-211ENST00000458034 TRAV13-1A0A0B4J241 112 aa7.79□□□□□ -1.16
RFX3-211ENST00000458034 A8MZ25 164 aa7.79□□□□□ -1.16
RFX3-211ENST00000458034 SMIM1B2RUZ4 78 aa7.79□□□□□ -1.16
RFX3-211ENST00000458034 LINC00694P0DN24 101 aa7.79□□□□□ -1.16
RFX3-211ENST00000458034 KRTAP1-1Q07627 177 aa7.79□□□□□ -1.16
RFX3-211ENST00000458034 MEIG1Q5JSS6 88 aa7.79□□□□□ -1.16
RFX3-211ENST00000458034 NTM-AS1Q6ZSK4 140 aa7.79□□□□□ -1.16
RFX3-211ENST00000458034 FLNCQ14315 2725 aa7.79□□□□□ -1.16
RFX3-211ENST00000458034 GIG44P09565 113 aaPredicted RBP7.78□□□□□ -1.16
RFX3-211ENST00000458034 HILS1P60008 231 aa7.78□□□□□ -1.16
RFX3-211ENST00000458034 NPC2P61916 151 aa7.78□□□□□ -1.16
RFX3-211ENST00000458034 PRIMA1Q86XR5 153 aa7.78□□□□□ -1.16
RFX3-211ENST00000458034 LINC00308Q8TCZ7 52 aa7.78□□□□□ -1.16
RFX3-211ENST00000458034 CDIP1Q9H305 208 aa7.78□□□□□ -1.16
RFX3-211ENST00000458034 SVEP1Q4LDE5 3571 aa7.78□□□□□ -1.16
RFX3-211ENST00000458034 ZNF462Q96JM2 2506 aa7.78□□□□□ -1.16
RFX3-211ENST00000458034 A0A1B0GV72 72 aa7.77□□□□□ -1.17
RFX3-211ENST00000458034 PLAC8L1A1L4L8 177 aa7.77□□□□□ -1.17
RFX3-211ENST00000458034 C2orf82Q6UX34 121 aa7.77□□□□□ -1.17
RFX3-211ENST00000458034 UBE2WQ96B02 151 aa7.77□□□□□ -1.17
RFX3-211ENST00000458034 C19orf73Q9NVV2 129 aa7.77□□□□□ -1.17
RFX3-211ENST00000458034 NAV2Q8IVL1 2488 aa7.77□□□□□ -1.17
RFX3-211ENST00000458034 USP24Q9UPU5 2620 aa7.77□□□□□ -1.17
RFX3-211ENST00000458034 LST1O00453 97 aa7.76□□□□□ -1.17
RFX3-211ENST00000458034 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.76□□□□□ -1.17
RFX3-211ENST00000458034 CSNK1G2-AS1Q8NCQ2 148 aa7.76□□□□□ -1.17
RFX3-211ENST00000458034 NTN5Q8WTR8 489 aaPredicted RBP7.76□□□□□ -1.17
RFX3-211ENST00000458034 ZNF625Q96I27 306 aaPredicted RBP7.76□□□□□ -1.17
RFX3-211ENST00000458034 UBR5O95071 2799 aaPredicted RBP7.76□□□□□ -1.17
RFX3-211ENST00000458034 CELSR1Q9NYQ6 3014 aa7.76□□□□□ -1.17
RFX3-211ENST00000458034 UTP20O75691 2785 aaKnown RBP7.75□□□□□ -1.17
RFX3-211ENST00000458034 F5H768 121 aa7.75□□□□□ -1.17
RFX3-211ENST00000458034 PF4P02776 101 aa7.75□□□□□ -1.17
RFX3-211ENST00000458034 VPS13CQ709C8 3753 aa7.75□□□□□ -1.17
RFX3-211ENST00000458034 PTPN13Q12923 2485 aa7.75□□□□□ -1.17
RFX3-211ENST00000458034 COL12A1Q99715 3063 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms