RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 LY6G6DO95868 133 aa14.55□□□□□ -0.08
SNX27-204ENST00000458013 C9orf85Q96MD7 179 aa14.54□□□□□ -0.08
SNX27-204ENST00000458013 ABCA1O95477 2261 aa14.54□□□□□ -0.08
SNX27-204ENST00000458013 UBE2D1P51668 147 aa14.54□□□□□ -0.08
SNX27-204ENST00000458013 LY6G6CO95867 125 aa14.53□□□□□ -0.08
SNX27-204ENST00000458013 LY6LH3BQJ8 138 aa14.53□□□□□ -0.08
SNX27-204ENST00000458013 ACACAQ13085 2346 aa14.53□□□□□ -0.08
SNX27-204ENST00000458013 TSHBP01222 138 aa14.52□□□□□ -0.08
SNX27-204ENST00000458013 PDE6GP18545 87 aa14.52□□□□□ -0.08
SNX27-204ENST00000458013 EIF4EBP1Q13541 118 aaPredicted RBP14.52□□□□□ -0.09
SNX27-204ENST00000458013 NANOS2P60321 138 aaKnown RBP14.51□□□□□ -0.09
SNX27-204ENST00000458013 SYCNQ0VAF6 134 aa14.51□□□□□ -0.09
SNX27-204ENST00000458013 NDUFC2-KCTD14E9PQ53 114 aa14.5□□□□□ -0.09
SNX27-204ENST00000458013 SMIM11BQ8TCY0 68 aa14.5□□□□□ -0.09
SNX27-204ENST00000458013 CCDC179H3BU77 68 aa14.5□□□□□ -0.09
SNX27-204ENST00000458013 NDUFA7O95182 113 aa14.5□□□□□ -0.09
SNX27-204ENST00000458013 ODF3Q96PU9 254 aa14.49□□□□□ -0.09
SNX27-204ENST00000458013 UQCRQO14949 82 aa14.49□□□□□ -0.09
SNX27-204ENST00000458013 UBE2D4Q9Y2X8 147 aa14.49□□□□□ -0.09
SNX27-204ENST00000458013 IBA57-AS1B1ANH7 110 aa14.49□□□□□ -0.09
SNX27-204ENST00000458013 ZNF702PQ9H963 129 aa14.49□□□□□ -0.09
SNX27-204ENST00000458013 C11orf21Q9P2W6 132 aa14.49□□□□□ -0.09
SNX27-204ENST00000458013 IGLV2-11P01706 119 aa14.48□□□□□ -0.09
SNX27-204ENST00000458013 Q6ZQY7 126 aa14.48□□□□□ -0.09
SNX27-204ENST00000458013 SMR3AQ99954 134 aa14.48□□□□□ -0.09
SNX27-204ENST00000458013 U3KQK5 164 aa14.47□□□□□ -0.09
SNX27-204ENST00000458013 H7C423 109 aa14.47□□□□□ -0.09
SNX27-204ENST00000458013 CRIP2P52943 208 aaPredicted RBP14.47□□□□□ -0.09
SNX27-204ENST00000458013 RNASE3P12724 160 aaKnown RBP14.47□□□□□ -0.09
SNX27-204ENST00000458013 RBX1P62877 108 aa14.47□□□□□ -0.09
SNX27-204ENST00000458013 PLCE1Q9P212 2302 aa14.46□□□□□ -0.09
SNX27-204ENST00000458013 ALPK3Q96L96 1907 aa14.46□□□□□ -0.09
SNX27-204ENST00000458013 KPRPQ5T749 579 aaPredicted RBP14.46□□□□□ -0.09
SNX27-204ENST00000458013 UBE2D3P61077 147 aa14.46□□□□□ -0.1
SNX27-204ENST00000458013 CELA1Q9UNI1 258 aa14.45□□□□□ -0.1
SNX27-204ENST00000458013 FBXL19-AS1Q494R0 122 aa14.45□□□□□ -0.1
SNX27-204ENST00000458013 PCNX1Q96RV3 2341 aa14.45□□□□□ -0.1
SNX27-204ENST00000458013 NRACQ8N912 160 aa14.45□□□□□ -0.1
SNX27-204ENST00000458013 TRBV30A0A0K0K1B3 111 aa14.45□□□□□ -0.1
SNX27-204ENST00000458013 SMIM9A6NGZ8 99 aa14.45□□□□□ -0.1
SNX27-204ENST00000458013 PLAC8L1A1L4L8 177 aa14.44□□□□□ -0.1
SNX27-204ENST00000458013 PCNX2A6NKB5 2137 aa14.44□□□□□ -0.1
SNX27-204ENST00000458013 C9orf116Q5BN46 136 aaPredicted RBP14.44□□□□□ -0.1
SNX27-204ENST00000458013 ZNF843Q8N446 348 aa14.44□□□□□ -0.1
SNX27-204ENST00000458013 C7orf33Q8WU49 177 aa14.44□□□□□ -0.1
SNX27-204ENST00000458013 LINC00959A0A1B0GUT2 108 aa14.44□□□□□ -0.1
SNX27-204ENST00000458013 FAM240AA0A1B0GVK7 77 aa14.43□□□□□ -0.1
SNX27-204ENST00000458013 IL17DQ8TAD2 202 aa14.43□□□□□ -0.1
SNX27-204ENST00000458013 MRPL55Q7Z7F7 128 aaKnown RBP14.43□□□□□ -0.1
SNX27-204ENST00000458013 A6NED7 52 aa14.42□□□□□ -0.1
SNX27-204ENST00000458013 MIFP14174 115 aa14.42□□□□□ -0.1
SNX27-204ENST00000458013 TRBV27A0A0K0K1C4 114 aa14.42□□□□□ -0.1
SNX27-204ENST00000458013 TRBV6-4A0A1B0GX49 114 aa14.42□□□□□ -0.1
SNX27-204ENST00000458013 C2orf91Q6ZV80 131 aa14.42□□□□□ -0.1
SNX27-204ENST00000458013 PRR3P79522 188 aaKnown RBP14.41□□□□□ -0.1
SNX27-204ENST00000458013 LINC00574Q9H8X3 128 aa14.41□□□□□ -0.1
SNX27-204ENST00000458013 KIR2DL5BQ8NHK3 375 aa14.41□□□□□ -0.1
SNX27-204ENST00000458013 IGLV4-69A0A075B6H9 119 aa14.4□□□□□ -0.1
SNX27-204ENST00000458013 C11orf71Q6IPW1 123 aa14.4□□□□□ -0.1
SNX27-204ENST00000458013 COL4A4P53420 1690 aaPredicted RBP14.4□□□□□ -0.1
SNX27-204ENST00000458013 SHANK1Q9Y566 2161 aa14.4□□□□□ -0.1
SNX27-204ENST00000458013 OXLD1Q5BKU9 147 aa14.4□□□□□ -0.11
SNX27-204ENST00000458013 LRRC75A-AS1Q8N1F1 130 aa14.4□□□□□ -0.11
SNX27-204ENST00000458013 TRAV10A0A0B4J240 114 aa14.39□□□□□ -0.11
SNX27-204ENST00000458013 K7ERS5 55 aa14.38□□□□□ -0.11
SNX27-204ENST00000458013 CDSNQ15517 529 aa14.38□□□□□ -0.11
SNX27-204ENST00000458013 M0R378 163 aa14.37□□□□□ -0.11
SNX27-204ENST00000458013 PRR15LQ9BU68 103 aa14.37□□□□□ -0.11
SNX27-204ENST00000458013 CD164L2Q6UWJ8 174 aa14.37□□□□□ -0.11
SNX27-204ENST00000458013 COX6A2Q02221 97 aa14.37□□□□□ -0.11
SNX27-204ENST00000458013 PCNX3Q9H6A9 2034 aa14.37□□□□□ -0.11
SNX27-204ENST00000458013 NOTCH3Q9UM47 2321 aa14.36□□□□□ -0.11
SNX27-204ENST00000458013 LINC01006Q8NI28 216 aa14.36□□□□□ -0.11
SNX27-204ENST00000458013 YPEL4Q96NS1 127 aa14.36□□□□□ -0.11
SNX27-204ENST00000458013 TIMM17BO60830 172 aa14.35□□□□□ -0.11
SNX27-204ENST00000458013 UBE2D2P62837 147 aa14.35□□□□□ -0.11
SNX27-204ENST00000458013 CIRBP-AS1Q8TBR5 109 aa14.34□□□□□ -0.11
SNX27-204ENST00000458013 LINC00694P0DN24 101 aa14.34□□□□□ -0.11
SNX27-204ENST00000458013 GPR179Q6PRD1 2367 aa14.33□□□□□ -0.11
SNX27-204ENST00000458013 PCDH15Q96QU1 1955 aa14.33□□□□□ -0.12
SNX27-204ENST00000458013 BRI3O95415 125 aa14.33□□□□□ -0.12
SNX27-204ENST00000458013 DEFB116Q30KQ4 102 aa14.33□□□□□ -0.12
SNX27-204ENST00000458013 XGP55808 180 aa14.33□□□□□ -0.12
SNX27-204ENST00000458013 FREM1Q5H8C1 2179 aa14.32□□□□□ -0.12
SNX27-204ENST00000458013 LOC107984640A0A0U1RRK4 108 aa14.32□□□□□ -0.12
SNX27-204ENST00000458013 ATP5EP2Q5VTU8 51 aa14.32□□□□□ -0.12
SNX27-204ENST00000458013 X6R8D5 127 aa14.32□□□□□ -0.12
SNX27-204ENST00000458013 ZNF73O43830 326 aaPredicted RBP14.32□□□□□ -0.12
SNX27-204ENST00000458013 SOSTDC1Q6X4U4 206 aa14.32□□□□□ -0.12
SNX27-204ENST00000458013 ESRGQ1W209 222 aa14.32□□□□□ -0.12
SNX27-204ENST00000458013 FAM19A3Q7Z5A8 133 aa14.32□□□□□ -0.12
SNX27-204ENST00000458013 SHISA2Q6UWI4 295 aa14.31□□□□□ -0.12
SNX27-204ENST00000458013 PSMG3-AS1Q96PY0 264 aa14.31□□□□□ -0.12
SNX27-204ENST00000458013 CYSRT1A8MQ03 144 aa14.31□□□□□ -0.12
SNX27-204ENST00000458013 A0A087WYN8 130 aa14.31□□□□□ -0.12
SNX27-204ENST00000458013 DHRS4-AS1Q9P1J3 65 aa14.3□□□□□ -0.12
SNX27-204ENST00000458013 LST1O00453 97 aa14.3□□□□□ -0.12
SNX27-204ENST00000458013 LELP1Q5T871 98 aa14.3□□□□□ -0.12
SNX27-204ENST00000458013 Q6Q795 121 aa14.3□□□□□ -0.12
SNX27-204ENST00000458013 SERP1Q9Y6X1 66 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms