RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 DEC1Q9P2X7 70 aa3.75□□□□□ -1.81
VPS41-209ENST00000457055 DOCK11Q5JSL3 2073 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 UNC13CQ8NB66 2214 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 IGLV4-3A0A075B6K6 122 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 TMSB15BA0A087X1C1 80 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 TRBV7-1A0A0A6YYK4 115 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 IGHV3-35A0A0C4DH35 117 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 TRBV10-2A0A0K0K1G8 114 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 hDV103S1A0JD37 113 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 CEBPZOSA8MTT3 80 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 C11orf94C9JXX5 98 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 KRTAP4-16G5E9R7 235 aaPredicted RBP3.74□□□□□ -1.81
VPS41-209ENST00000457055 C16orf97H3BN30 126 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 DSCAMO60469 2012 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 CCL3P10147 92 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 C2orf83Q53S99 150 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 C9orf66Q5T8R8 295 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 C2orf66Q6UXQ4 117 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 CNEP1R1Q8N9A8 125 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 C11orf1Q9H5F2 150 aa3.74□□□□□ -1.81
VPS41-209ENST00000457055 FBN1P35555 2871 aaKnown RBP3.73□□□□□ -1.81
VPS41-209ENST00000457055 ARID1AO14497 2285 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 PKDREJQ9NTG1 2253 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 TACC2O95359 2948 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 IGLV3-12A0A075B6K2 115 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 IGHV3-21A0A0B4J1V1 117 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 A0A0J9YXY3 114 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 IGHV1-69P01742 117 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 IGHV3-13P01766 116 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 IGHV3-30-3P0DP02 117 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 SNRPGP62308 76 aaKnown RBP3.73□□□□□ -1.81
VPS41-209ENST00000457055 SUPT4H1P63272 117 aaKnown RBP3.73□□□□□ -1.81
VPS41-209ENST00000457055 PLGLAQ15195 96 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 ATXN8Q156A1 80 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 Q6JHZ5 121 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 LYPD2Q6UXB3 125 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 ZCCHC23Q6ZST2 131 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 NDUFA11Q86Y39 141 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 C20orf197Q8N268 126 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 FAM19A2Q8N3H0 131 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 SPTSSBQ8NFR3 76 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 NPBQ8NG41 125 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 ZNF524Q96C55 264 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 IL25Q9H293 177 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 PRO1854Q9UHT4 67 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 ACANP16112 2415 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 DCHS2Q6V1P9 2916 aa3.73□□□□□ -1.81
VPS41-209ENST00000457055 AGRNO00468 2067 aa3.72□□□□□ -1.81
VPS41-209ENST00000457055 PRRC2AP48634 2157 aaKnown RBP3.72□□□□□ -1.81
VPS41-209ENST00000457055 PRRC2CQ9Y520 2896 aaKnown RBP3.72□□□□□ -1.81
VPS41-209ENST00000457055 IGLV8-61A0A075B6I0 122 aa3.72□□□□□ -1.81
VPS41-209ENST00000457055 TRAV7A0A075B6U4 112 aa3.72□□□□□ -1.81
VPS41-209ENST00000457055 TRBV10-3A0A0K0K1G6 114 aa3.72□□□□□ -1.81
VPS41-209ENST00000457055 IFI27P40305 119 aaPredicted RBP3.72□□□□□ -1.81
VPS41-209ENST00000457055 CMC4P56277 68 aaPredicted RBP3.72□□□□□ -1.81
VPS41-209ENST00000457055 CAV3P56539 151 aa3.72□□□□□ -1.81
VPS41-209ENST00000457055 ZNF117Q03924 483 aa3.72□□□□□ -1.81
VPS41-209ENST00000457055 MIAQ16674 131 aa3.72□□□□□ -1.81
VPS41-209ENST00000457055 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
VPS41-209ENST00000457055 MYO7BQ6PIF6 2116 aa3.72□□□□□ -1.81
VPS41-209ENST00000457055 ZGRF1Q86YA3 2104 aa3.72□□□□□ -1.81
VPS41-209ENST00000457055 C8orf17Q9NRJ1 99 aa3.72□□□□□ -1.81
VPS41-209ENST00000457055 NACAE9PAV3 2078 aa3.72□□□□□ -1.81
VPS41-209ENST00000457055 ATRQ13535 2644 aa3.72□□□□□ -1.81
VPS41-209ENST00000457055 CSPG4Q6UVK1 2322 aa3.71□□□□□ -1.82
VPS41-209ENST00000457055 KIAA1549Q9HCM3 1950 aa3.71□□□□□ -1.82
VPS41-209ENST00000457055 TRBV7-3A0A075B6L6 115 aa3.71□□□□□ -1.82
VPS41-209ENST00000457055 PINLYPA6NC86 204 aa3.71□□□□□ -1.82
VPS41-209ENST00000457055 C16orf90A8MZG2 172 aa3.71□□□□□ -1.82
VPS41-209ENST00000457055 HCG22E2RYF7 251 aa3.71□□□□□ -1.82
VPS41-209ENST00000457055 IGLV2-23P01705 113 aa3.71□□□□□ -1.82
VPS41-209ENST00000457055 MSMBP08118 114 aa3.71□□□□□ -1.82
VPS41-209ENST00000457055 C9orf116Q5BN46 136 aaPredicted RBP3.71□□□□□ -1.82
VPS41-209ENST00000457055 Q8N6K4 173 aa3.71□□□□□ -1.82
VPS41-209ENST00000457055 MAP1AP78559 2803 aaPredicted RBP3.71□□□□□ -1.82
VPS41-209ENST00000457055 GTF3C1Q12789 2109 aa3.71□□□□□ -1.82
VPS41-209ENST00000457055 ZNF469Q96JG9 3925 aaPredicted RBP3.71□□□□□ -1.82
VPS41-209ENST00000457055 CPAMD8Q8IZJ3 1885 aa3.71□□□□□ -1.82
VPS41-209ENST00000457055 IGLV1-50A0A075B6I6 118 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 TRBV25-1A0A075B6N4 114 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 IGHV3-49A0A0A0MS15 119 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 TRAV1-2A0A0B4J238 106 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 IGHV7-4-1A0A0J9YVY3 117 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 TMEM30CPA0ZSE6 113 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 A6NED7 52 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 FAM223BA6NKX1 122 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 C17orf51A8MQB3 221 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 F8WEM9 126 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 KRTAP24-1Q3LI83 254 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 ATP5EP2Q5VTU8 51 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 Q8N814 137 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 C7orf33Q8WU49 177 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 TMEM190Q8WZ59 177 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 ZNF414Q96IQ9 312 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 FAM167A-AS1Q96KT0 104 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 CDC42SE1Q9NRR8 79 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 DHRS4-AS1Q9P1J3 65 aa3.7□□□□□ -1.82
VPS41-209ENST00000457055 IGKV2D-26A0A0A0MRZ7 120 aa3.69□□□□□ -1.82
VPS41-209ENST00000457055 COX6CP09669 75 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms