RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 LAMTOR2Q9Y2Q5 125 aa6.7□□□□□ -1.34
ATG4A-206ENST00000457035 UBE2L6O14933 153 aa6.69□□□□□ -1.34
ATG4A-206ENST00000457035 HLA-DQA1P01909 254 aa6.69□□□□□ -1.34
ATG4A-206ENST00000457035 Q0VG73 95 aa6.69□□□□□ -1.34
ATG4A-206ENST00000457035 KIAA1644Q3SXP7 199 aa6.69□□□□□ -1.34
ATG4A-206ENST00000457035 LINC00269Q8N2A0 174 aa6.69□□□□□ -1.34
ATG4A-206ENST00000457035 MAPKAPK5-AS1Q8N8E1 139 aa6.69□□□□□ -1.34
ATG4A-206ENST00000457035 LRCOL1A6NCL2 159 aa6.68□□□□□ -1.34
ATG4A-206ENST00000457035 FGF6P10767 208 aa6.68□□□□□ -1.34
ATG4A-206ENST00000457035 FCER1GP30273 86 aa6.68□□□□□ -1.34
ATG4A-206ENST00000457035 TM2D2Q9BX73 214 aa6.68□□□□□ -1.34
ATG4A-206ENST00000457035 A0A087WTM6 91 aa6.67□□□□□ -1.34
ATG4A-206ENST00000457035 LOC389332A0A1B0GUA5 103 aa6.67□□□□□ -1.34
ATG4A-206ENST00000457035 TCAPO15273 167 aa6.67□□□□□ -1.34
ATG4A-206ENST00000457035 REG3AQ06141 175 aa6.67□□□□□ -1.34
ATG4A-206ENST00000457035 MIAQ16674 131 aa6.67□□□□□ -1.34
ATG4A-206ENST00000457035 RNASEKQ6P5S7 137 aaKnown RBP6.67□□□□□ -1.34
ATG4A-206ENST00000457035 KRTAP26-1Q6PEX3 210 aa6.67□□□□□ -1.34
ATG4A-206ENST00000457035 COX11Q9Y6N1 276 aa6.67□□□□□ -1.34
ATG4A-206ENST00000457035 IGKV2D-24A0A075B6R9 120 aa6.66□□□□□ -1.34
ATG4A-206ENST00000457035 PSCAO43653 123 aa6.66□□□□□ -1.34
ATG4A-206ENST00000457035 MT-ND6P03923 174 aa6.66□□□□□ -1.34
ATG4A-206ENST00000457035 ZNF25P17030 456 aaPredicted RBP6.66□□□□□ -1.34
ATG4A-206ENST00000457035 FABP9Q0Z7S8 132 aa6.66□□□□□ -1.34
ATG4A-206ENST00000457035 AMMECR1LQ6DCA0 310 aa6.66□□□□□ -1.34
ATG4A-206ENST00000457035 CLPSL2Q6UWE3 100 aa6.66□□□□□ -1.34
ATG4A-206ENST00000457035 MRPL52Q86TS9 123 aaKnown RBP6.66□□□□□ -1.34
ATG4A-206ENST00000457035 Q8N8P6 123 aa6.66□□□□□ -1.34
ATG4A-206ENST00000457035 RMI2Q96E14 147 aa6.66□□□□□ -1.34
ATG4A-206ENST00000457035 ALKBH7Q9BT30 221 aaPredicted RBP6.66□□□□□ -1.34
ATG4A-206ENST00000457035 MAP1LC3AQ9H492 121 aa6.66□□□□□ -1.34
ATG4A-206ENST00000457035 SMCO4Q9NRQ5 59 aa6.66□□□□□ -1.34
ATG4A-206ENST00000457035 CDC42SE2Q9NRR3 84 aa6.66□□□□□ -1.34
ATG4A-206ENST00000457035 CRPP02741 224 aa6.65□□□□□ -1.34
ATG4A-206ENST00000457035 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
ATG4A-206ENST00000457035 CBLN2Q8IUK8 224 aa6.65□□□□□ -1.34
ATG4A-206ENST00000457035 FAM104AQ969W3 186 aa6.65□□□□□ -1.34
ATG4A-206ENST00000457035 C1orf43Q9BWL3 253 aa6.65□□□□□ -1.34
ATG4A-206ENST00000457035 UBE2D4Q9Y2X8 147 aa6.65□□□□□ -1.34
ATG4A-206ENST00000457035 CSDC2Q9Y534 153 aaKnown RBP6.65□□□□□ -1.34
ATG4A-206ENST00000457035 TRAPPC1Q9Y5R8 145 aa6.65□□□□□ -1.34
ATG4A-206ENST00000457035 DNAH8Q96JB1 4490 aa6.65□□□□□ -1.35
ATG4A-206ENST00000457035 TRAV8-4A0A0B4J246 113 aa6.64□□□□□ -1.35
ATG4A-206ENST00000457035 RAB5AP20339 215 aa6.64□□□□□ -1.35
ATG4A-206ENST00000457035 IFI27P40305 119 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-206ENST00000457035 RPL39P62891 51 aaKnown RBP6.64□□□□□ -1.35
ATG4A-206ENST00000457035 WFDC2Q14508 124 aa6.64□□□□□ -1.35
ATG4A-206ENST00000457035 SPATA12Q7Z6I5 190 aa6.64□□□□□ -1.35
ATG4A-206ENST00000457035 ZNF664Q8N3J9 261 aa6.64□□□□□ -1.35
ATG4A-206ENST00000457035 OR5A1Q8NGJ0 315 aa6.64□□□□□ -1.35
ATG4A-206ENST00000457035 BAALCQ8WXS3 180 aa6.64□□□□□ -1.35
ATG4A-206ENST00000457035 TMEM18Q96B42 140 aa6.64□□□□□ -1.35
ATG4A-206ENST00000457035 TMEM101Q96IK0 257 aa6.64□□□□□ -1.35
ATG4A-206ENST00000457035 TIMM21Q9BVV7 248 aa6.64□□□□□ -1.35
ATG4A-206ENST00000457035 IGLV10-54A0A075B6I4 117 aa6.63□□□□□ -1.35
ATG4A-206ENST00000457035 K7EMI3 77 aa6.63□□□□□ -1.35
ATG4A-206ENST00000457035 NXT2Q9NPJ8 142 aaKnown RBP6.63□□□□□ -1.35
ATG4A-206ENST00000457035 LINC01546A6NGU7 62 aa6.62□□□□□ -1.35
ATG4A-206ENST00000457035 SMAGPQ0VAQ4 97 aa6.62□□□□□ -1.35
ATG4A-206ENST00000457035 DGAT2L7PQ6IED9 249 aa6.62□□□□□ -1.35
ATG4A-206ENST00000457035 RYR1P21817 5038 aa6.62□□□□□ -1.35
ATG4A-206ENST00000457035 IGKV3OR2-268A0A0C4DH90 116 aa6.61□□□□□ -1.35
ATG4A-206ENST00000457035 LINC00959A0A1B0GUT2 108 aa6.61□□□□□ -1.35
ATG4A-206ENST00000457035 COLCA2A8K830 154 aa6.61□□□□□ -1.35
ATG4A-206ENST00000457035 LECT2O14960 151 aa6.61□□□□□ -1.35
ATG4A-206ENST00000457035 FUSP35637 526 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATG4A-206ENST00000457035 ORMDL2Q53FV1 153 aa6.61□□□□□ -1.35
ATG4A-206ENST00000457035 Q8N814 137 aa6.61□□□□□ -1.35
ATG4A-206ENST00000457035 PRSS3P2Q8NHM4 247 aa6.61□□□□□ -1.35
ATG4A-206ENST00000457035 OPRPNQ99935 248 aaPredicted RBP6.61□□□□□ -1.35
ATG4A-206ENST00000457035 PYGO1Q9Y3Y4 419 aa6.61□□□□□ -1.35
ATG4A-206ENST00000457035 APOBP04114 4563 aaKnown RBP6.61□□□□□ -1.35
ATG4A-206ENST00000457035 MRPS36P82909 103 aaKnown RBP6.6□□□□□ -1.35
ATG4A-206ENST00000457035 RNASE13Q5GAN3 156 aaKnown RBP6.6□□□□□ -1.35
ATG4A-206ENST00000457035 C2orf66Q6UXQ4 117 aa6.6□□□□□ -1.35
ATG4A-206ENST00000457035 Q6ZUT4 128 aa6.6□□□□□ -1.35
ATG4A-206ENST00000457035 C18orf32Q8TCD1 76 aa6.6□□□□□ -1.35
ATG4A-206ENST00000457035 CHCHD10Q8WYQ3 142 aaPredicted RBP6.6□□□□□ -1.35
ATG4A-206ENST00000457035 KRTAP4-5Q9BYR2 181 aa6.6□□□□□ -1.35
ATG4A-206ENST00000457035 SPANXA1Q9NS26 97 aa6.6□□□□□ -1.35
ATG4A-206ENST00000457035 GAGE12HA6NDE8 117 aa6.59□□□□□ -1.35
ATG4A-206ENST00000457035 URB1-AS1Q96HZ7 61 aa6.59□□□□□ -1.35
ATG4A-206ENST00000457035 CYSLTR1Q9Y271 337 aa6.59□□□□□ -1.35
ATG4A-206ENST00000457035 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
ATG4A-206ENST00000457035 IGIPA6NJ69 53 aa6.58□□□□□ -1.36
ATG4A-206ENST00000457035 C16orf90A8MZG2 172 aa6.58□□□□□ -1.36
ATG4A-206ENST00000457035 C1orf196B1AJZ1 125 aa6.58□□□□□ -1.36
ATG4A-206ENST00000457035 USP17L23D6RBM5 183 aa6.58□□□□□ -1.36
ATG4A-206ENST00000457035 CCL25O15444 150 aa6.58□□□□□ -1.36
ATG4A-206ENST00000457035 SCO1O75880 301 aa6.58□□□□□ -1.36
ATG4A-206ENST00000457035 G0S2P27469 103 aa6.58□□□□□ -1.36
ATG4A-206ENST00000457035 FOXI1Q12951 378 aa6.58□□□□□ -1.36
ATG4A-206ENST00000457035 SS18Q15532 418 aa6.58□□□□□ -1.36
ATG4A-206ENST00000457035 NTN5Q8WTR8 489 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-206ENST00000457035 TOMM6Q96B49 74 aa6.58□□□□□ -1.36
ATG4A-206ENST00000457035 IGLV4-3A0A075B6K6 122 aa6.57□□□□□ -1.36
ATG4A-206ENST00000457035 TRAV13-1A0A0B4J241 112 aa6.57□□□□□ -1.36
ATG4A-206ENST00000457035 TRGC2P03986 189 aa6.57□□□□□ -1.36
ATG4A-206ENST00000457035 PRSS1P07477 247 aa6.57□□□□□ -1.36
ATG4A-206ENST00000457035 LINC00614P0C842 121 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms