RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 PRELID3AQ96N28 172 aa4.58□□□□□ -1.68
CHEK2-220ENST00000454252 NIT2Q9NQR4 276 aa4.58□□□□□ -1.68
CHEK2-220ENST00000454252 TRBV7-3A0A075B6L6 115 aa4.57□□□□□ -1.68
CHEK2-220ENST00000454252 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
CHEK2-220ENST00000454252 PPBPP02775 128 aa4.57□□□□□ -1.68
CHEK2-220ENST00000454252 UBE2D3P61077 147 aa4.57□□□□□ -1.68
CHEK2-220ENST00000454252 UBE2D2P62837 147 aa4.57□□□□□ -1.68
CHEK2-220ENST00000454252 LAGE3Q14657 143 aa4.57□□□□□ -1.68
CHEK2-220ENST00000454252 NTM-AS1Q6ZSK4 140 aa4.57□□□□□ -1.68
CHEK2-220ENST00000454252 C18orf32Q8TCD1 76 aa4.57□□□□□ -1.68
CHEK2-220ENST00000454252 PRADC1Q9BSG0 188 aa4.57□□□□□ -1.68
CHEK2-220ENST00000454252 TM2D2Q9BX73 214 aa4.57□□□□□ -1.68
CHEK2-220ENST00000454252 GTSF1LQ9H1H1 148 aa4.57□□□□□ -1.68
CHEK2-220ENST00000454252 LOC389332A0A1B0GUA5 103 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 SDHAF1A6NFY7 115 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 H7C1H1 209 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 NUPR1O60356 82 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 HIST1H2BKO60814 126 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 HIST1H2BJP06899 126 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 HIST1H2BOP23527 126 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 HIST1H2BBP33778 126 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 IFI27P40305 119 aaPredicted RBP4.56□□□□□ -1.68
CHEK2-220ENST00000454252 HIST1H2BDP58876 126 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 LINC00310P59036 64 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 RPL37AP61513 92 aaKnown RBP4.56□□□□□ -1.68
CHEK2-220ENST00000454252 SUMO2P61956 95 aaKnown RBP4.56□□□□□ -1.68
CHEK2-220ENST00000454252 HIST1H2BCP62807 126 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 HIST2H2BEQ16778 126 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.56□□□□□ -1.68
CHEK2-220ENST00000454252 SH2D6Q7Z4S9 175 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 ATP6V0E2Q8NHE4 81 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 HIST1H2BHQ93079 126 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 HIST1H2BNQ99877 126 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 HIST1H2BMQ99879 126 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 C20orf78Q9BR46 151 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 ST20Q9HBF5 79 aa4.56□□□□□ -1.68
CHEK2-220ENST00000454252 IGKV2D-24A0A075B6R9 120 aa4.55□□□□□ -1.68
CHEK2-220ENST00000454252 TRBV27A0A0K0K1C4 114 aa4.55□□□□□ -1.68
CHEK2-220ENST00000454252 PANO1I0J062 215 aa4.55□□□□□ -1.68
CHEK2-220ENST00000454252 TCAPO15273 167 aa4.55□□□□□ -1.68
CHEK2-220ENST00000454252 TSHBP01222 138 aa4.55□□□□□ -1.68
CHEK2-220ENST00000454252 RPL32P62910 135 aaKnown RBP4.55□□□□□ -1.68
CHEK2-220ENST00000454252 RPL36AP83881 106 aaKnown RBP4.55□□□□□ -1.68
CHEK2-220ENST00000454252 RPL36ALQ969Q0 106 aaKnown RBP4.55□□□□□ -1.68
CHEK2-220ENST00000454252 SMIM2Q9BVW6 85 aa4.55□□□□□ -1.68
CHEK2-220ENST00000454252 LAMTOR2Q9Y2Q5 125 aa4.55□□□□□ -1.68
CHEK2-220ENST00000454252 TRAV8-3A0A0A6YYJ7 113 aa4.54□□□□□ -1.68
CHEK2-220ENST00000454252 LINC01546A6NGU7 62 aa4.54□□□□□ -1.68
CHEK2-220ENST00000454252 VCYO14598 125 aa4.54□□□□□ -1.68
CHEK2-220ENST00000454252 Q0VG73 95 aa4.54□□□□□ -1.68
CHEK2-220ENST00000454252 Q8N8P6 123 aa4.54□□□□□ -1.68
CHEK2-220ENST00000454252 UBE2WQ96B02 151 aa4.54□□□□□ -1.68
CHEK2-220ENST00000454252 CHCHD7Q9BUK0 85 aa4.54□□□□□ -1.68
CHEK2-220ENST00000454252 MAP1LC3AQ9H492 121 aa4.54□□□□□ -1.68
CHEK2-220ENST00000454252 KLK12Q9UKR0 248 aa4.54□□□□□ -1.68
CHEK2-220ENST00000454252 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.54□□□□□ -1.68
CHEK2-220ENST00000454252 A0A096LNJ9 63 aa4.53□□□□□ -1.68
CHEK2-220ENST00000454252 C1orf196B1AJZ1 125 aa4.53□□□□□ -1.68
CHEK2-220ENST00000454252 I3L3M4 83 aa4.53□□□□□ -1.68
CHEK2-220ENST00000454252 PPP1R17O96001 155 aa4.53□□□□□ -1.68
CHEK2-220ENST00000454252 ESDP10768 282 aa4.53□□□□□ -1.68
CHEK2-220ENST00000454252 PMCHP20382 165 aa4.53□□□□□ -1.68
CHEK2-220ENST00000454252 NIT1Q86X76 327 aa4.53□□□□□ -1.68
CHEK2-220ENST00000454252 Q8N976 141 aa4.53□□□□□ -1.68
CHEK2-220ENST00000454252 SERF1AO75920 110 aa4.52□□□□□ -1.69
CHEK2-220ENST00000454252 LINC00614P0C842 121 aa4.52□□□□□ -1.69
CHEK2-220ENST00000454252 NDUFA6P56556 154 aa4.52□□□□□ -1.69
CHEK2-220ENST00000454252 COA6Q5JTJ3 125 aaKnown RBP4.52□□□□□ -1.69
CHEK2-220ENST00000454252 PRSS3P2Q8NHM4 247 aa4.52□□□□□ -1.69
CHEK2-220ENST00000454252 FAM104AQ969W3 186 aa4.52□□□□□ -1.69
CHEK2-220ENST00000454252 NXT2Q9NPJ8 142 aaKnown RBP4.52□□□□□ -1.69
CHEK2-220ENST00000454252 TRBV6-8A0A0A6YYG3 113 aa4.51□□□□□ -1.69
CHEK2-220ENST00000454252 RPL39P62891 51 aaKnown RBP4.51□□□□□ -1.69
CHEK2-220ENST00000454252 COTL1Q14019 142 aa4.51□□□□□ -1.69
CHEK2-220ENST00000454252 PMCHL1Q16048 86 aa4.51□□□□□ -1.69
CHEK2-220ENST00000454252 RNASEKQ6P5S7 137 aaKnown RBP4.51□□□□□ -1.69
CHEK2-220ENST00000454252 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.5□□□□□ -1.69
CHEK2-220ENST00000454252 IGKV2-29A2NJV5 120 aaPredicted RBP4.5□□□□□ -1.69
CHEK2-220ENST00000454252 USP17L23D6RBM5 183 aa4.5□□□□□ -1.69
CHEK2-220ENST00000454252 PRSS1P07477 247 aa4.5□□□□□ -1.69
CHEK2-220ENST00000454252 RAB5BP61020 215 aa4.5□□□□□ -1.69
CHEK2-220ENST00000454252 C4orf48Q5BLP8 95 aa4.5□□□□□ -1.69
CHEK2-220ENST00000454252 ENHOQ6UWT2 76 aa4.5□□□□□ -1.69
CHEK2-220ENST00000454252 FA2HQ7L5A8 372 aa4.5□□□□□ -1.69
CHEK2-220ENST00000454252 BAGE3Q86Y29 109 aa4.5□□□□□ -1.69
CHEK2-220ENST00000454252 FAM19A2Q8N3H0 131 aa4.5□□□□□ -1.69
CHEK2-220ENST00000454252 C20orf203Q8NBC4 194 aa4.5□□□□□ -1.69
CHEK2-220ENST00000454252 KIR2DL4Q99706 377 aa4.5□□□□□ -1.69
CHEK2-220ENST00000454252 AP5S1Q9NUS5 200 aa4.5□□□□□ -1.69
CHEK2-220ENST00000454252 LPAP08519 4548 aa4.49□□□□□ -1.69
CHEK2-220ENST00000454252 IGLV4-60A0A075B6I1 120 aa4.49□□□□□ -1.69
CHEK2-220ENST00000454252 TRBV25-1A0A075B6N4 114 aa4.49□□□□□ -1.69
CHEK2-220ENST00000454252 IGHV1-24A0A0C4DH33 117 aa4.49□□□□□ -1.69
CHEK2-220ENST00000454252 IFITM10A6NMD0 228 aa4.49□□□□□ -1.69
CHEK2-220ENST00000454252 FCER1GP30273 86 aa4.49□□□□□ -1.69
CHEK2-220ENST00000454252 AMTP48728 403 aa4.49□□□□□ -1.69
CHEK2-220ENST00000454252 GAGE6Q13070 117 aa4.49□□□□□ -1.69
CHEK2-220ENST00000454252 CLPSL2Q6UWE3 100 aa4.49□□□□□ -1.69
CHEK2-220ENST00000454252 LINC00173Q6ZV60 143 aa4.49□□□□□ -1.69
CHEK2-220ENST00000454252 CHCHD1Q96BP2 118 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms