RNA–Protein interactions for RNA: ENST00000454018.6

SYNE1-214, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 1,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-214ENST00000454018 GAGE2DQ9UEU5 116 aa5.95□□□□□ -1.46
SYNE1-214ENST00000454018 VPS13DQ5THJ4 4388 aa5.95□□□□□ -1.46
SYNE1-214ENST00000454018 DNAH6Q9C0G6 4158 aa5.95□□□□□ -1.46
SYNE1-214ENST00000454018 LOC389332A0A1B0GUA5 103 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 ESDP10768 282 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 DEFB104AQ8WTQ1 72 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 TMEM262E9PQX1 116 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 IGHV3-30P01768 117 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 IGHV3-33P01772 117 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 TRGC2P03986 189 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 IGHV3-30-3P0DP02 117 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 IGHV3-30-5P0DP03 117 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 ZNF25P17030 456 aaPredicted RBP5.94□□□□□ -1.46
SYNE1-214ENST00000454018 SMAGPQ0VAQ4 97 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 GAGE6Q13070 117 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 LAGE3Q14657 143 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 ORMDL2Q53FV1 153 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 MPV17L2Q567V2 206 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 PAPPA-AS1Q5QFB9 102 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 Q6ZR54 194 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 C18orf32Q8TCD1 76 aa5.94□□□□□ -1.46
SYNE1-214ENST00000454018 KMT2AQ03164 3969 aa5.93□□□□□ -1.46
SYNE1-214ENST00000454018 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.93□□□□□ -1.46
SYNE1-214ENST00000454018 A0A1B0GUV1 79 aa5.93□□□□□ -1.46
SYNE1-214ENST00000454018 IGKV2-29A2NJV5 120 aaPredicted RBP5.93□□□□□ -1.46
SYNE1-214ENST00000454018 IFI27P40305 119 aaPredicted RBP5.93□□□□□ -1.46
SYNE1-214ENST00000454018 AMMECR1LQ6DCA0 310 aa5.93□□□□□ -1.46
SYNE1-214ENST00000454018 C20orf203Q8NBC4 194 aa5.93□□□□□ -1.46
SYNE1-214ENST00000454018 PRSS3P2Q8NHM4 247 aa5.93□□□□□ -1.46
SYNE1-214ENST00000454018 KRTAP1-5Q9BYS1 174 aa5.93□□□□□ -1.46
SYNE1-214ENST00000454018 FGF6P10767 208 aa5.92□□□□□ -1.46
SYNE1-214ENST00000454018 RBX1P62877 108 aa5.92□□□□□ -1.46
SYNE1-214ENST00000454018 FA2HQ7L5A8 372 aa5.92□□□□□ -1.46
SYNE1-214ENST00000454018 MRPL52Q86TS9 123 aaKnown RBP5.92□□□□□ -1.46
SYNE1-214ENST00000454018 KMT2CQ8NEZ4 4911 aaKnown RBP5.91□□□□□ -1.46
SYNE1-214ENST00000454018 LINC01546A6NGU7 62 aa5.91□□□□□ -1.46
SYNE1-214ENST00000454018 IBA57-AS1B1ANH7 110 aa5.91□□□□□ -1.46
SYNE1-214ENST00000454018 M0R2N4 97 aa5.91□□□□□ -1.46
SYNE1-214ENST00000454018 CRPP02741 224 aa5.91□□□□□ -1.46
SYNE1-214ENST00000454018 ANGP03950 147 aaKnown RBP5.91□□□□□ -1.46
SYNE1-214ENST00000454018 G0S2P27469 103 aa5.91□□□□□ -1.46
SYNE1-214ENST00000454018 RAB5BP61020 215 aa5.91□□□□□ -1.46
SYNE1-214ENST00000454018 RNASEKQ6P5S7 137 aaKnown RBP5.91□□□□□ -1.46
SYNE1-214ENST00000454018 Q8N976 141 aa5.91□□□□□ -1.46
SYNE1-214ENST00000454018 TIMM21Q9BVV7 248 aa5.91□□□□□ -1.46
SYNE1-214ENST00000454018 CYSLTR1Q9Y271 337 aa5.91□□□□□ -1.46
SYNE1-214ENST00000454018 CSDC2Q9Y534 153 aaKnown RBP5.91□□□□□ -1.46
SYNE1-214ENST00000454018 TRAV8-3A0A0A6YYJ7 113 aa5.9□□□□□ -1.46
SYNE1-214ENST00000454018 LINC01549A6NIU2 74 aa5.9□□□□□ -1.46
SYNE1-214ENST00000454018 Q75L30 129 aa5.9□□□□□ -1.46
SYNE1-214ENST00000454018 OR5A1Q8NGJ0 315 aa5.9□□□□□ -1.46
SYNE1-214ENST00000454018 TMEM101Q96IK0 257 aa5.9□□□□□ -1.46
SYNE1-214ENST00000454018 SPANXA1Q9NS26 97 aa5.9□□□□□ -1.46
SYNE1-214ENST00000454018 KLK12Q9UKR0 248 aa5.9□□□□□ -1.46
SYNE1-214ENST00000454018 UBE2D4Q9Y2X8 147 aa5.9□□□□□ -1.46
SYNE1-214ENST00000454018 IGLV4-60A0A075B6I1 120 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 RPL39P62891 51 aaKnown RBP5.89□□□□□ -1.47
SYNE1-214ENST00000454018 Q0VG73 95 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 MAJINQ3KP22 176 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 C1orf134Q5TEV5 83 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 C2orf66Q6UXQ4 117 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 NFE4Q86UQ8 179 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 C6orf223Q8N319 242 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 PRR34Q9NV39 138 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 SACSQ9NZJ4 4579 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 LINC00614P0C842 121 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 REG3AQ06141 175 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 MIAQ16674 131 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 UBE2WQ96B02 151 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 CHCHD1Q96BP2 118 aaKnown RBP5.89□□□□□ -1.47
SYNE1-214ENST00000454018 RMI2Q96E14 147 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 PAM16Q9Y3D7 125 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 PYGO1Q9Y3Y4 419 aa5.89□□□□□ -1.47
SYNE1-214ENST00000454018 MRPS36P82909 103 aaKnown RBP5.88□□□□□ -1.47
SYNE1-214ENST00000454018 BAGE3Q86Y29 109 aa5.88□□□□□ -1.47
SYNE1-214ENST00000454018 LINC00269Q8N2A0 174 aa5.88□□□□□ -1.47
SYNE1-214ENST00000454018 TOMM6Q96B49 74 aa5.88□□□□□ -1.47
SYNE1-214ENST00000454018 URB1-AS1Q96HZ7 61 aa5.88□□□□□ -1.47
SYNE1-214ENST00000454018 Q9HAA7 133 aa5.88□□□□□ -1.47
SYNE1-214ENST00000454018 HYDINQ4G0P3 5121 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 HIST1H2BKO60814 126 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 HBDP02042 147 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 HIST1H2BJP06899 126 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 HIST1H2BOP23527 126 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 HIST1H2BBP33778 126 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 HIST1H2BDP58876 126 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 SEC61BP60468 96 aaKnown RBP5.87□□□□□ -1.47
SYNE1-214ENST00000454018 HIST1H2BCP62807 126 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 HIST2H2BEQ16778 126 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.87□□□□□ -1.47
SYNE1-214ENST00000454018 CLPSL2Q6UWE3 100 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 ENHOQ6UWT2 76 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 Q6ZUT4 128 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 ZNF664Q8N3J9 261 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 HIST1H2BHQ93079 126 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 TIMM17AQ99595 171 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 HIST1H2BNQ99877 126 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 HIST1H2BMQ99879 126 aa5.87□□□□□ -1.47
SYNE1-214ENST00000454018 CDC42SE2Q9NRR3 84 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms