RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 RBMY1A1P0DJD3 496 aaKnown RBP11.47□□□□□ -0.57
SNX17-204ENST00000453453 RBMY1CP0DJD4 496 aa11.47□□□□□ -0.57
SNX17-204ENST00000453453 IGHV4-30-4P0DP06 118 aa11.47□□□□□ -0.57
SNX17-204ENST00000453453 RBMY1FQ15415 496 aaKnown RBP11.47□□□□□ -0.57
SNX17-204ENST00000453453 ZNF876PQ49A33 203 aa11.47□□□□□ -0.57
SNX17-204ENST00000453453 KIR2DL4Q99706 377 aa11.47□□□□□ -0.57
SNX17-204ENST00000453453 TP53TG1Q9Y2A0 90 aa11.47□□□□□ -0.57
SNX17-204ENST00000453453 RNASE3P12724 160 aaKnown RBP11.46□□□□□ -0.57
SNX17-204ENST00000453453 LINC00315P59091 139 aa11.46□□□□□ -0.57
SNX17-204ENST00000453453 LINC00467Q9BRT7 94 aa11.46□□□□□ -0.57
SNX17-204ENST00000453453 IGHV3OR16-12A0A075B7B8 117 aa11.46□□□□□ -0.58
SNX17-204ENST00000453453 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.46□□□□□ -0.58
SNX17-204ENST00000453453 TRBV27A0A0K0K1C4 114 aa11.46□□□□□ -0.58
SNX17-204ENST00000453453 LEPROTO15243 131 aa11.46□□□□□ -0.58
SNX17-204ENST00000453453 GIG44P09565 113 aaPredicted RBP11.46□□□□□ -0.58
SNX17-204ENST00000453453 HTN1P15515 57 aa11.46□□□□□ -0.58
SNX17-204ENST00000453453 AMELXQ99217 191 aa11.46□□□□□ -0.58
SNX17-204ENST00000453453 SPANXA1Q9NS26 97 aa11.46□□□□□ -0.58
SNX17-204ENST00000453453 PKD1L1Q8TDX9 2849 aa11.45□□□□□ -0.58
SNX17-204ENST00000453453 J3QQQ9 107 aa11.45□□□□□ -0.58
SNX17-204ENST00000453453 GNRH2O43555 120 aa11.45□□□□□ -0.58
SNX17-204ENST00000453453 LGALS3P17931 250 aaKnown RBP11.45□□□□□ -0.58
SNX17-204ENST00000453453 ZFAND6Q6FIF0 208 aa11.45□□□□□ -0.58
SNX17-204ENST00000453453 Q6Q795 121 aa11.45□□□□□ -0.58
SNX17-204ENST00000453453 C1orf158Q8N1D5 194 aa11.45□□□□□ -0.58
SNX17-204ENST00000453453 ANKRD29Q8N6D5 301 aa11.45□□□□□ -0.58
SNX17-204ENST00000453453 CMYA5Q8N3K9 4069 aa11.44□□□□□ -0.58
SNX17-204ENST00000453453 SCGB1C2P0DMR2 95 aa11.44□□□□□ -0.58
SNX17-204ENST00000453453 SDHAF1A6NFY7 115 aa11.43□□□□□ -0.58
SNX17-204ENST00000453453 A8MZ25 164 aa11.43□□□□□ -0.58
SNX17-204ENST00000453453 ZNF415Q09FC8 603 aa11.43□□□□□ -0.58
SNX17-204ENST00000453453 KPRPQ5T749 579 aaPredicted RBP11.43□□□□□ -0.58
SNX17-204ENST00000453453 IGHV3-16A0A0C4DH30 117 aa11.42□□□□□ -0.58
SNX17-204ENST00000453453 SLC25A20O43772 301 aa11.42□□□□□ -0.58
SNX17-204ENST00000453453 IGHV3-33P01772 117 aa11.42□□□□□ -0.58
SNX17-204ENST00000453453 SUMO4Q6EEV6 95 aa11.42□□□□□ -0.58
SNX17-204ENST00000453453 CSNK1G2-AS1Q8NCQ2 148 aa11.42□□□□□ -0.58
SNX17-204ENST00000453453 MDFICQ9P1T7 246 aa11.42□□□□□ -0.58
SNX17-204ENST00000453453 TMEM223A0PJW6 202 aa11.41□□□□□ -0.58
SNX17-204ENST00000453453 RPL13AP40429 203 aaKnown RBP11.41□□□□□ -0.58
SNX17-204ENST00000453453 TSPEAR-AS2P59090 65 aa11.41□□□□□ -0.58
SNX17-204ENST00000453453 ATXN8Q156A1 80 aa11.41□□□□□ -0.58
SNX17-204ENST00000453453 MRPL23Q16540 153 aaKnown RBP11.41□□□□□ -0.58
SNX17-204ENST00000453453 TMEM170BQ5T4T1 132 aa11.41□□□□□ -0.58
SNX17-204ENST00000453453 TMEM263Q8WUH6 116 aaKnown RBP11.41□□□□□ -0.58
SNX17-204ENST00000453453 PTH2Q96A98 100 aa11.4□□□□□ -0.58
SNX17-204ENST00000453453 C9orf85Q96MD7 179 aa11.4□□□□□ -0.58
SNX17-204ENST00000453453 ANAPC13Q9BS18 74 aa11.39□□□□□ -0.59
SNX17-204ENST00000453453 RHODO00212 210 aa11.38□□□□□ -0.59
SNX17-204ENST00000453453 GAGE5Q13069 117 aa11.38□□□□□ -0.59
SNX17-204ENST00000453453 GAGE6Q13070 117 aa11.38□□□□□ -0.59
SNX17-204ENST00000453453 DEFB135Q30KP9 77 aa11.38□□□□□ -0.59
SNX17-204ENST00000453453 ZNRF2Q8NHG8 242 aa11.38□□□□□ -0.59
SNX17-204ENST00000453453 C16orf74Q96GX8 76 aa11.38□□□□□ -0.59
SNX17-204ENST00000453453 SPXQ9BT56 116 aa11.38□□□□□ -0.59
SNX17-204ENST00000453453 TRBV30A0A0K0K1B3 111 aa11.38□□□□□ -0.59
SNX17-204ENST00000453453 A4D1N5 150 aa11.38□□□□□ -0.59
SNX17-204ENST00000453453 SMIM9A6NGZ8 99 aa11.38□□□□□ -0.59
SNX17-204ENST00000453453 M0R2P5 195 aa11.38□□□□□ -0.59
SNX17-204ENST00000453453 RNF183Q96D59 192 aa11.38□□□□□ -0.59
SNX17-204ENST00000453453 EDA2RQ9HAV5 297 aa11.37□□□□□ -0.59
SNX17-204ENST00000453453 C9JAW5 83 aa11.36□□□□□ -0.59
SNX17-204ENST00000453453 PRM2P04554 102 aa11.36□□□□□ -0.59
SNX17-204ENST00000453453 C11orf72Q8NBR9 251 aa11.36□□□□□ -0.59
SNX17-204ENST00000453453 MGAM2Q2M2H8 2515 aa11.36□□□□□ -0.59
SNX17-204ENST00000453453 TRBV10-2A0A0K0K1G8 114 aa11.35□□□□□ -0.59
SNX17-204ENST00000453453 PRB2P02812 416 aaPredicted RBP11.35□□□□□ -0.59
SNX17-204ENST00000453453 LINC01620Q4KN68 170 aa11.35□□□□□ -0.59
SNX17-204ENST00000453453 SNCGO76070 127 aa11.35□□□□□ -0.59
SNX17-204ENST00000453453 ZNF22P17026 224 aaPredicted RBP11.35□□□□□ -0.59
SNX17-204ENST00000453453 RPL39P62891 51 aaKnown RBP11.35□□□□□ -0.59
SNX17-204ENST00000453453 PYGO1Q9Y3Y4 419 aa11.35□□□□□ -0.59
SNX17-204ENST00000453453 NOTCH1P46531 2555 aa11.34□□□□□ -0.59
SNX17-204ENST00000453453 H3BT86 120 aa11.34□□□□□ -0.59
SNX17-204ENST00000453453 K7EIL1 84 aa11.34□□□□□ -0.59
SNX17-204ENST00000453453 SPRY2O43597 315 aa11.34□□□□□ -0.59
SNX17-204ENST00000453453 GAGE2BQ13066 116 aa11.34□□□□□ -0.59
SNX17-204ENST00000453453 GAGE2EQ4V326 116 aa11.34□□□□□ -0.59
SNX17-204ENST00000453453 DEFB121Q5J5C9 76 aa11.34□□□□□ -0.59
SNX17-204ENST00000453453 SFTA2Q6UW10 78 aa11.34□□□□□ -0.59
SNX17-204ENST00000453453 MUC4Q99102 2169 aa11.34□□□□□ -0.59
SNX17-204ENST00000453453 SPANXDQ9BXN6 97 aa11.34□□□□□ -0.59
SNX17-204ENST00000453453 SPANXCQ9NY87 97 aa11.34□□□□□ -0.59
SNX17-204ENST00000453453 GAGE2DQ9UEU5 116 aa11.34□□□□□ -0.59
SNX17-204ENST00000453453 M0QY20 66 aa11.33□□□□□ -0.6
SNX17-204ENST00000453453 PIK3CD-AS1Q5SR53 167 aa11.33□□□□□ -0.6
SNX17-204ENST00000453453 C20orf203Q8NBC4 194 aa11.33□□□□□ -0.6
SNX17-204ENST00000453453 FAM240AA0A1B0GVK7 77 aa11.32□□□□□ -0.6
SNX17-204ENST00000453453 F5H697 171 aa11.32□□□□□ -0.6
SNX17-204ENST00000453453 IL17DQ8TAD2 202 aa11.32□□□□□ -0.6
SNX17-204ENST00000453453 X6R8D5 127 aa11.32□□□□□ -0.6
SNX17-204ENST00000453453 I3L3M4 83 aa11.31□□□□□ -0.6
SNX17-204ENST00000453453 EIF4EBP3O60516 100 aaPredicted RBP11.31□□□□□ -0.6
SNX17-204ENST00000453453 MIFP14174 115 aa11.31□□□□□ -0.6
SNX17-204ENST00000453453 EMP1P54849 157 aa11.31□□□□□ -0.6
SNX17-204ENST00000453453 DAZ2Q13117 558 aaKnown RBP11.31□□□□□ -0.6
SNX17-204ENST00000453453 MUSTN1Q8IVN3 82 aa11.31□□□□□ -0.6
SNX17-204ENST00000453453 DNAH3Q8TD57 4116 aa11.31□□□□□ -0.6
SNX17-204ENST00000453453 TRAV8-4A0A0B4J246 113 aa11.31□□□□□ -0.6
SNX17-204ENST00000453453 NBEAL1Q6ZS30 2694 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms