RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 RBAKDNA6NC62 111 aa7.09□□□□□ -1.27
CCDC171-203ENST00000449575 SRSF9Q13242 221 aaKnown RBP eCLIP7.09□□□□□ -1.27
CCDC171-203ENST00000449575 IGLV2-18A0A075B6J9 118 aa7.09□□□□□ -1.27
CCDC171-203ENST00000449575 PTH2Q96A98 100 aa7.09□□□□□ -1.27
CCDC171-203ENST00000449575 KLLNB2CW77 178 aa7.08□□□□□ -1.28
CCDC171-203ENST00000449575 RNASE4P34096 147 aaKnown RBP7.08□□□□□ -1.28
CCDC171-203ENST00000449575 SCGB1D4Q6XE38 83 aa7.08□□□□□ -1.28
CCDC171-203ENST00000449575 ANKRD29Q8N6D5 301 aa7.08□□□□□ -1.28
CCDC171-203ENST00000449575 TP53TG1Q9Y2A0 90 aa7.08□□□□□ -1.28
CCDC171-203ENST00000449575 H3BVH4 76 aa7.08□□□□□ -1.28
CCDC171-203ENST00000449575 ZFP2Q6ZN57 461 aa7.08□□□□□ -1.28
CCDC171-203ENST00000449575 A0A0J9YWU9 116 aa7.07□□□□□ -1.28
CCDC171-203ENST00000449575 TCL1BO95988 128 aa7.07□□□□□ -1.28
CCDC171-203ENST00000449575 INSP01308 110 aa7.07□□□□□ -1.28
CCDC171-203ENST00000449575 HTN1P15515 57 aa7.07□□□□□ -1.28
CCDC171-203ENST00000449575 Q8NAQ8 132 aa7.07□□□□□ -1.28
CCDC171-203ENST00000449575 ODF3Q96PU9 254 aa7.07□□□□□ -1.28
CCDC171-203ENST00000449575 TMEM126AQ9H061 195 aa7.07□□□□□ -1.28
CCDC171-203ENST00000449575 IGHV4-28A0A0C4DH34 117 aa7.07□□□□□ -1.28
CCDC171-203ENST00000449575 ZNF815PA8K554 130 aa7.07□□□□□ -1.28
CCDC171-203ENST00000449575 ZNF80P51504 273 aaPredicted RBP7.07□□□□□ -1.28
CCDC171-203ENST00000449575 EDA2RQ9HAV5 297 aa7.07□□□□□ -1.28
CCDC171-203ENST00000449575 TENM2Q9NT68 2774 aa7.06□□□□□ -1.28
CCDC171-203ENST00000449575 CCDC179H3BU77 68 aa7.06□□□□□ -1.28
CCDC171-203ENST00000449575 ORM1P02763 201 aa7.06□□□□□ -1.28
CCDC171-203ENST00000449575 ORMDL2Q53FV1 153 aa7.06□□□□□ -1.28
CCDC171-203ENST00000449575 LINC01587Q99440 93 aa7.06□□□□□ -1.28
CCDC171-203ENST00000449575 STARD9Q9P2P6 4700 aa7.05□□□□□ -1.28
CCDC171-203ENST00000449575 SLC25A20O43772 301 aa7.05□□□□□ -1.28
CCDC171-203ENST00000449575 PRADC1Q9BSG0 188 aa7.05□□□□□ -1.28
CCDC171-203ENST00000449575 MSRB1Q9NZV6 116 aa7.05□□□□□ -1.28
CCDC171-203ENST00000449575 EMP1P54849 157 aa7.05□□□□□ -1.28
CCDC171-203ENST00000449575 HERVK_113P61574 105 aa7.05□□□□□ -1.28
CCDC171-203ENST00000449575 C10orf126Q8N4M7 172 aa7.05□□□□□ -1.28
CCDC171-203ENST00000449575 SCGB3A1Q96QR1 104 aa7.05□□□□□ -1.28
CCDC171-203ENST00000449575 KIR2DL4Q99706 377 aa7.05□□□□□ -1.28
CCDC171-203ENST00000449575 CELA1Q9UNI1 258 aa7.05□□□□□ -1.28
CCDC171-203ENST00000449575 RS1O15537 224 aa7.04□□□□□ -1.28
CCDC171-203ENST00000449575 PAPPA-AS1Q5QFB9 102 aa7.04□□□□□ -1.28
CCDC171-203ENST00000449575 C11orf21Q9P2W6 132 aa7.04□□□□□ -1.28
CCDC171-203ENST00000449575 CSDC2Q9Y534 153 aaKnown RBP7.04□□□□□ -1.28
CCDC171-203ENST00000449575 MUC4Q99102 2169 aa7.04□□□□□ -1.28
CCDC171-203ENST00000449575 PLAC8L1A1L4L8 177 aa7.04□□□□□ -1.28
CCDC171-203ENST00000449575 GAS8-AS1O95177 125 aa7.04□□□□□ -1.28
CCDC171-203ENST00000449575 NEXN-AS1Q8NBZ9 246 aa7.04□□□□□ -1.28
CCDC171-203ENST00000449575 SPANXDQ9BXN6 97 aa7.04□□□□□ -1.28
CCDC171-203ENST00000449575 PRO1854Q9UHT4 67 aa7.04□□□□□ -1.28
CCDC171-203ENST00000449575 LENEPQ9Y5L5 61 aa7.04□□□□□ -1.28
CCDC171-203ENST00000449575 TRAV4A0A0B4J268 109 aa7.03□□□□□ -1.28
CCDC171-203ENST00000449575 MIFP14174 115 aa7.03□□□□□ -1.28
CCDC171-203ENST00000449575 GATA1P15976 413 aaPredicted RBP7.03□□□□□ -1.28
CCDC171-203ENST00000449575 NRACQ8N912 160 aa7.03□□□□□ -1.28
CCDC171-203ENST00000449575 TOMM6Q96B49 74 aa7.03□□□□□ -1.28
CCDC171-203ENST00000449575 LINC01600Q96MT4 127 aa7.03□□□□□ -1.28
CCDC171-203ENST00000449575 TRAV8-4A0A0B4J246 113 aa7.03□□□□□ -1.28
CCDC171-203ENST00000449575 C4orf48Q5BLP8 95 aa7.03□□□□□ -1.28
CCDC171-203ENST00000449575 SFTA2Q6UW10 78 aa7.03□□□□□ -1.28
CCDC171-203ENST00000449575 MEIG1Q5JSS6 88 aa7.02□□□□□ -1.29
CCDC171-203ENST00000449575 FAM159AQ6UWV7 190 aa7.02□□□□□ -1.29
CCDC171-203ENST00000449575 SMIM2Q9BVW6 85 aa7.02□□□□□ -1.29
CCDC171-203ENST00000449575 MDFICQ9P1T7 246 aa7.02□□□□□ -1.29
CCDC171-203ENST00000449575 NACAE9PAV3 2078 aa7.02□□□□□ -1.29
CCDC171-203ENST00000449575 C9JAW5 83 aa7.02□□□□□ -1.29
CCDC171-203ENST00000449575 RPL13AP40429 203 aaKnown RBP7.02□□□□□ -1.29
CCDC171-203ENST00000449575 ANXA2RQ3ZCQ2 193 aa7.02□□□□□ -1.29
CCDC171-203ENST00000449575 P0DMU3 169 aa7.01□□□□□ -1.29
CCDC171-203ENST00000449575 FAM231AP0DMU4 169 aa7.01□□□□□ -1.29
CCDC171-203ENST00000449575 FAM231CP0DMU5 169 aa7.01□□□□□ -1.29
CCDC171-203ENST00000449575 GNRH2O43555 120 aa7.01□□□□□ -1.29
CCDC171-203ENST00000449575 NANOS2P60321 138 aaKnown RBP7.01□□□□□ -1.29
CCDC171-203ENST00000449575 PLEKHB2Q96CS7 222 aa7.01□□□□□ -1.29
CCDC171-203ENST00000449575 C11orf68Q9H3H3 251 aaKnown RBP7.01□□□□□ -1.29
CCDC171-203ENST00000449575 IGHV4-4A0A075B6R2 117 aa7□□□□□ -1.29
CCDC171-203ENST00000449575 IGHV1OR15-1A0A075B7D0 117 aa7□□□□□ -1.29
CCDC171-203ENST00000449575 A0A0J9YY99 117 aa7□□□□□ -1.29
CCDC171-203ENST00000449575 SMIM9A6NGZ8 99 aa7□□□□□ -1.29
CCDC171-203ENST00000449575 CFC1BP0CG36 223 aa7□□□□□ -1.29
CCDC171-203ENST00000449575 CFC1P0CG37 223 aa7□□□□□ -1.29
CCDC171-203ENST00000449575 ATXN8Q156A1 80 aa7□□□□□ -1.29
CCDC171-203ENST00000449575 ZNF575Q86XF7 245 aa7□□□□□ -1.29
CCDC171-203ENST00000449575 C15orf53Q8NAA6 179 aa7□□□□□ -1.29
CCDC171-203ENST00000449575 C11orf72Q8NBR9 251 aa7□□□□□ -1.29
CCDC171-203ENST00000449575 FAM222AQ5U5X8 452 aa7□□□□□ -1.29
CCDC171-203ENST00000449575 IL17DQ8TAD2 202 aa7□□□□□ -1.29
CCDC171-203ENST00000449575 LYSTQ99698 3801 aa7□□□□□ -1.29
CCDC171-203ENST00000449575 PLECQ15149 4684 aaKnown RBP7□□□□□ -1.29
CCDC171-203ENST00000449575 TRAV21A0A0B4J279 112 aa6.99□□□□□ -1.29
CCDC171-203ENST00000449575 IGKV3D-20A0A0C4DH25 116 aa6.99□□□□□ -1.29
CCDC171-203ENST00000449575 IGHV3-30P01768 117 aa6.99□□□□□ -1.29
CCDC171-203ENST00000449575 IGHV3-30-5P0DP03 117 aa6.99□□□□□ -1.29
CCDC171-203ENST00000449575 SLC25A29Q8N8R3 303 aa6.99□□□□□ -1.29
CCDC171-203ENST00000449575 TMEM263Q8WUH6 116 aaKnown RBP6.99□□□□□ -1.29
CCDC171-203ENST00000449575 BAALCQ8WXS3 180 aa6.99□□□□□ -1.29
CCDC171-203ENST00000449575 WWC2-AS2Q96NR7 200 aa6.99□□□□□ -1.29
CCDC171-203ENST00000449575 NOP10Q9NPE3 64 aaKnown RBP6.99□□□□□ -1.29
CCDC171-203ENST00000449575 NTN5Q8WTR8 489 aaPredicted RBP6.99□□□□□ -1.29
CCDC171-203ENST00000449575 RASL10AQ92737 203 aa6.99□□□□□ -1.29
CCDC171-203ENST00000449575 DYNC2H1Q8NCM8 4307 aaKnown RBP6.99□□□□□ -1.29
CCDC171-203ENST00000449575 SPANXN1Q5VSR9 72 aa6.98□□□□□ -1.29
CCDC171-203ENST00000449575 C11orf45Q8TAV5 145 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms