RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	ETDC	A0A1B0GVM5	59 aa		5.99	□□□□□ -1.45
HCG18-238	ENST00000449544	NDUFS6	O75380	124 aa	Known RBP	5.99	□□□□□ -1.45
HCG18-238	ENST00000449544	NEXN-AS1	Q8NBZ9	246 aa		5.99	□□□□□ -1.45
HCG18-238	ENST00000449544	TMEM126A	Q9H061	195 aa		5.99	□□□□□ -1.45
HCG18-238	ENST00000449544	NF1	P21359	2839 aa		5.98	□□□□□ -1.45
HCG18-238	ENST00000449544	TSTD3	H0UI37	97 aa		5.98	□□□□□ -1.45
HCG18-238	ENST00000449544	SOCS3	O14543	225 aa		5.98	□□□□□ -1.45
HCG18-238	ENST00000449544	ZNF664	Q8N3J9	261 aa		5.98	□□□□□ -1.45
HCG18-238	ENST00000449544	GHRH	P01286	108 aa		5.98	□□□□□ -1.45
HCG18-238	ENST00000449544	PLA2G1B	P04054	148 aa	Known RBP	5.98	□□□□□ -1.45
HCG18-238	ENST00000449544	PLN	P26678	52 aa		5.98	□□□□□ -1.45
HCG18-238	ENST00000449544	LBH	Q53QV2	105 aa	Predicted RBP	5.98	□□□□□ -1.45
HCG18-238	ENST00000449544	LYRM7	Q5U5X0	104 aa		5.98	□□□□□ -1.45
HCG18-238	ENST00000449544	PLEKHB2	Q96CS7	222 aa		5.98	□□□□□ -1.45
HCG18-238	ENST00000449544	PGPEP1	Q9NXJ5	209 aa		5.98	□□□□□ -1.45
HCG18-238	ENST00000449544	LINC00588	Q9Y4M8	146 aa		5.98	□□□□□ -1.45
HCG18-238	ENST00000449544	USP17L23	D6RBM5	183 aa		5.97	□□□□□ -1.45
HCG18-238	ENST00000449544		Q8N8P6	123 aa		5.97	□□□□□ -1.45
HCG18-238	ENST00000449544	DNAL4	O96015	105 aa		5.97	□□□□□ -1.45
HCG18-238	ENST00000449544	COX6C	P09669	75 aa		5.97	□□□□□ -1.45
HCG18-238	ENST00000449544	CTAG1A	P78358	180 aa		5.97	□□□□□ -1.45
HCG18-238	ENST00000449544	MPV17L2	Q567V2	206 aa		5.97	□□□□□ -1.45
HCG18-238	ENST00000449544	NPY	P01303	97 aa		5.96	□□□□□ -1.45
HCG18-238	ENST00000449544	TRGC2	P03986	189 aa		5.96	□□□□□ -1.45
HCG18-238	ENST00000449544	IQCJ	Q1A5X6	159 aa		5.96	□□□□□ -1.45
HCG18-238	ENST00000449544	LINC00467	Q9BRT7	94 aa		5.96	□□□□□ -1.45
HCG18-238	ENST00000449544	DPM2	O94777	84 aa		5.96	□□□□□ -1.46
HCG18-238	ENST00000449544	XG	P55808	180 aa		5.96	□□□□□ -1.46
HCG18-238	ENST00000449544	NPC2	P61916	151 aa		5.96	□□□□□ -1.46
HCG18-238	ENST00000449544	FAM19A2	Q8N3H0	131 aa		5.96	□□□□□ -1.46
HCG18-238	ENST00000449544	GNB1L	Q9BYB4	327 aa		5.96	□□□□□ -1.46
HCG18-238	ENST00000449544		H3BNG1	76 aa		5.95	□□□□□ -1.46
HCG18-238	ENST00000449544	CDK2AP2	O75956	126 aa		5.95	□□□□□ -1.46
HCG18-238	ENST00000449544	RNASE3	P12724	160 aa	Known RBP	5.95	□□□□□ -1.46
HCG18-238	ENST00000449544	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.95	□□□□□ -1.46
HCG18-238	ENST00000449544	C5orf52	A6NGY3	159 aa		5.95	□□□□□ -1.46
HCG18-238	ENST00000449544	TAL2	Q16559	108 aa		5.95	□□□□□ -1.46
HCG18-238	ENST00000449544	NIT1	Q86X76	327 aa		5.95	□□□□□ -1.46
HCG18-238	ENST00000449544	NBEAL2	Q6ZNJ1	2754 aa		5.95	□□□□□ -1.46
HCG18-238	ENST00000449544	LINC00526	Q96FQ7	95 aa		5.95	□□□□□ -1.46
HCG18-238	ENST00000449544	HIST1H4G	Q99525	98 aa		5.95	□□□□□ -1.46
HCG18-238	ENST00000449544	VAMP8	Q9BV40	100 aa		5.95	□□□□□ -1.46
HCG18-238	ENST00000449544	RPL13A	P40429	203 aa	Known RBP	5.94	□□□□□ -1.46
HCG18-238	ENST00000449544	BOD1L2	Q8IYS8	172 aa		5.94	□□□□□ -1.46
HCG18-238	ENST00000449544	PMCHL2	Q9BQD1	86 aa		5.94	□□□□□ -1.46
HCG18-238	ENST00000449544	TMEM238L	A0A1B0GVL6	79 aa		5.94	□□□□□ -1.46
HCG18-238	ENST00000449544		A6NJY4	79 aa		5.94	□□□□□ -1.46
HCG18-238	ENST00000449544	SPINK8	P0C7L1	97 aa		5.94	□□□□□ -1.46
HCG18-238	ENST00000449544	ADCYAP1	P18509	176 aa		5.94	□□□□□ -1.46
HCG18-238	ENST00000449544	GATD1	Q8NB37	220 aa		5.94	□□□□□ -1.46
HCG18-238	ENST00000449544	HIGD2A	Q9BW72	106 aa		5.94	□□□□□ -1.46
HCG18-238	ENST00000449544	PIK3CD-AS1	Q5SR53	167 aa		5.94	□□□□□ -1.46
HCG18-238	ENST00000449544	ERAS	Q7Z444	233 aa		5.94	□□□□□ -1.46
HCG18-238	ENST00000449544	STPG4	Q8N801	248 aa		5.94	□□□□□ -1.46
HCG18-238	ENST00000449544	DCHS2	Q6V1P9	2916 aa		5.93	□□□□□ -1.46
HCG18-238	ENST00000449544	LOC107984640	A0A0U1RRK4	108 aa		5.93	□□□□□ -1.46
HCG18-238	ENST00000449544	LINC01556	Q5JQF7	62 aa		5.93	□□□□□ -1.46
HCG18-238	ENST00000449544		H7C423	109 aa		5.93	□□□□□ -1.46
HCG18-238	ENST00000449544	CXCL5	P42830	114 aa		5.93	□□□□□ -1.46
HCG18-238	ENST00000449544	UBE2D3	P61077	147 aa		5.93	□□□□□ -1.46
HCG18-238	ENST00000449544	UBE2D2	P62837	147 aa		5.93	□□□□□ -1.46
HCG18-238	ENST00000449544	JOSD1	Q15040	202 aa	Predicted RBP	5.93	□□□□□ -1.46
HCG18-238	ENST00000449544	PMCHL1	Q16048	86 aa		5.93	□□□□□ -1.46
HCG18-238	ENST00000449544	RPL39	P62891	51 aa	Known RBP	5.93	□□□□□ -1.46
HCG18-238	ENST00000449544	PRO1933	Q9H354	126 aa		5.93	□□□□□ -1.46
HCG18-238	ENST00000449544	IGLV4-69	A0A075B6H9	119 aa		5.92	□□□□□ -1.46
HCG18-238	ENST00000449544	SMIM13	P0DJ93	91 aa		5.92	□□□□□ -1.46
HCG18-238	ENST00000449544	CTRL	P40313	264 aa		5.92	□□□□□ -1.46
HCG18-238	ENST00000449544	APLN	Q9ULZ1	77 aa		5.92	□□□□□ -1.46
HCG18-238	ENST00000449544	EPM2A	B3EWF7	344 aa		5.92	□□□□□ -1.46
HCG18-238	ENST00000449544	MRPS12	O15235	138 aa	Known RBP	5.92	□□□□□ -1.46
HCG18-238	ENST00000449544	COX6A2	Q02221	97 aa		5.92	□□□□□ -1.46
HCG18-238	ENST00000449544	C11orf21	Q9P2W6	132 aa		5.92	□□□□□ -1.46
HCG18-238	ENST00000449544		V9GYV3	84 aa		5.92	□□□□□ -1.46
HCG18-238	ENST00000449544	ZNF815P	A8K554	130 aa		5.92	□□□□□ -1.46
HCG18-238	ENST00000449544		M0QY20	66 aa		5.92	□□□□□ -1.46
HCG18-238	ENST00000449544	RTL8C	O15255	209 aa		5.92	□□□□□ -1.46
HCG18-238	ENST00000449544	SMR3B	P02814	79 aa	Predicted RBP	5.92	□□□□□ -1.46
HCG18-238	ENST00000449544	C11orf1	Q9H5F2	150 aa		5.92	□□□□□ -1.46
HCG18-238	ENST00000449544	LEPROT	O15243	131 aa		5.91	□□□□□ -1.46
HCG18-238	ENST00000449544	TSPAN13	O95857	204 aa		5.91	□□□□□ -1.46
HCG18-238	ENST00000449544	C20orf203	Q8NBC4	194 aa		5.91	□□□□□ -1.46
HCG18-238	ENST00000449544	OPRPN	Q99935	248 aa	Predicted RBP	5.91	□□□□□ -1.46
HCG18-238	ENST00000449544	SFTA2	Q6UW10	78 aa		5.91	□□□□□ -1.46
HCG18-238	ENST00000449544	IGKC	P01834	107 aa		5.91	□□□□□ -1.46
HCG18-238	ENST00000449544	CD164L2	Q6UWJ8	174 aa		5.91	□□□□□ -1.46
HCG18-238	ENST00000449544		A0A0J9YXV3	536 aa		5.91	□□□□□ -1.46
HCG18-238	ENST00000449544	C19orf71	A6NCJ1	209 aa		5.91	□□□□□ -1.46
HCG18-238	ENST00000449544		Q6ZUT4	128 aa		5.91	□□□□□ -1.46
HCG18-238	ENST00000449544	C21orf62-AS1	Q17RA5	79 aa		5.9	□□□□□ -1.46
HCG18-238	ENST00000449544	CHCHD1	Q96BP2	118 aa	Known RBP	5.9	□□□□□ -1.46
HCG18-238	ENST00000449544	NDUFA12	Q9UI09	145 aa		5.9	□□□□□ -1.46
HCG18-238	ENST00000449544		A0A1B0GV90	55 aa		5.9	□□□□□ -1.47
HCG18-238	ENST00000449544		K7EN84	100 aa		5.9	□□□□□ -1.47
HCG18-238	ENST00000449544	COX7B2	Q8TF08	81 aa		5.9	□□□□□ -1.47
HCG18-238	ENST00000449544		K7EMI3	77 aa		5.9	□□□□□ -1.47
HCG18-238	ENST00000449544		Q6ZSN1	163 aa		5.9	□□□□□ -1.47
HCG18-238	ENST00000449544	UBE2D4	Q9Y2X8	147 aa		5.9	□□□□□ -1.47
HCG18-238	ENST00000449544	TMEM238	C9JI98	176 aa		5.89	□□□□□ -1.47
HCG18-238	ENST00000449544	SMIM6	P0DI80	62 aa		5.89	□□□□□ -1.47

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