RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 ATP5LO75964 103 aa9.98□□□□□ -0.81
TNF-208ENST00000449264 ZNF25P17030 456 aaPredicted RBP9.98□□□□□ -0.81
TNF-208ENST00000449264 PKIAP61925 76 aa9.98□□□□□ -0.81
TNF-208ENST00000449264 Q6ZN92 141 aa9.98□□□□□ -0.81
TNF-208ENST00000449264 IFI27L1Q96BM0 104 aa9.98□□□□□ -0.81
TNF-208ENST00000449264 TIMM21Q9BVV7 248 aa9.98□□□□□ -0.81
TNF-208ENST00000449264 PYGO1Q9Y3Y4 419 aa9.98□□□□□ -0.81
TNF-208ENST00000449264 SIVA1O15304 175 aa9.97□□□□□ -0.81
TNF-208ENST00000449264 TMEM141Q96I45 108 aa9.97□□□□□ -0.81
TNF-208ENST00000449264 PACRGQ96M98 296 aaPredicted RBP9.97□□□□□ -0.81
TNF-208ENST00000449264 UPK3BQ9BT76 320 aa9.97□□□□□ -0.81
TNF-208ENST00000449264 ANGP03950 147 aaKnown RBP9.96□□□□□ -0.81
TNF-208ENST00000449264 ZC2HC1BQ5TFG8 222 aa9.96□□□□□ -0.81
TNF-208ENST00000449264 CLPSL2Q6UWE3 100 aa9.96□□□□□ -0.81
TNF-208ENST00000449264 A0A1B0GUV1 79 aa9.96□□□□□ -0.82
TNF-208ENST00000449264 KRTDAPP60985 99 aa9.96□□□□□ -0.82
TNF-208ENST00000449264 BAALCQ8WXS3 180 aa9.96□□□□□ -0.82
TNF-208ENST00000449264 FAM104AQ969W3 186 aa9.96□□□□□ -0.82
TNF-208ENST00000449264 CSDC2Q9Y534 153 aaKnown RBP9.96□□□□□ -0.82
TNF-208ENST00000449264 IGKV3OR2-268A0A0C4DH90 116 aa9.95□□□□□ -0.82
TNF-208ENST00000449264 PRSS1P07477 247 aa9.95□□□□□ -0.82
TNF-208ENST00000449264 LINC01556Q5JQF7 62 aa9.95□□□□□ -0.82
TNF-208ENST00000449264 ZNF664Q8N3J9 261 aa9.95□□□□□ -0.82
TNF-208ENST00000449264 MAP1LC3CQ9BXW4 147 aa9.95□□□□□ -0.82
TNF-208ENST00000449264 Q9H8V8 135 aa9.95□□□□□ -0.82
TNF-208ENST00000449264 CDC42SE2Q9NRR3 84 aa9.95□□□□□ -0.82
TNF-208ENST00000449264 DNAH1Q9P2D7 4330 aa9.94□□□□□ -0.82
TNF-208ENST00000449264 DNAH10OSP0CZ25 163 aa9.94□□□□□ -0.82
TNF-208ENST00000449264 MRPS36P82909 103 aaKnown RBP9.94□□□□□ -0.82
TNF-208ENST00000449264 TEX43Q6ZNM6 134 aa9.94□□□□□ -0.82
TNF-208ENST00000449264 OR10D4PQ8NGN7 298 aa9.94□□□□□ -0.82
TNF-208ENST00000449264 VCX2Q9H322 139 aa9.94□□□□□ -0.82
TNF-208ENST00000449264 KLK12Q9UKR0 248 aa9.94□□□□□ -0.82
TNF-208ENST00000449264 VPS13DQ5THJ4 4388 aa9.94□□□□□ -0.82
TNF-208ENST00000449264 PAPPA-AS1Q5QFB9 102 aa9.93□□□□□ -0.82
TNF-208ENST00000449264 LINC00269Q8N2A0 174 aa9.93□□□□□ -0.82
TNF-208ENST00000449264 NPSP0C0P6 89 aa9.93□□□□□ -0.82
TNF-208ENST00000449264 C3orf79P0CE67 100 aa9.93□□□□□ -0.82
TNF-208ENST00000449264 C2orf88Q9BSF0 95 aa9.93□□□□□ -0.82
TNF-208ENST00000449264 PMVKQ15126 192 aa9.92□□□□□ -0.82
TNF-208ENST00000449264 TRAV13-1A0A0B4J241 112 aa9.91□□□□□ -0.82
TNF-208ENST00000449264 SYS1-DBNDD2H3BUS1 97 aa9.91□□□□□ -0.82
TNF-208ENST00000449264 LY6G6CO95867 125 aa9.91□□□□□ -0.82
TNF-208ENST00000449264 CRPP02741 224 aa9.91□□□□□ -0.82
TNF-208ENST00000449264 AMELXQ99217 191 aa9.91□□□□□ -0.82
TNF-208ENST00000449264 ALMS1Q8TCU4 4167 aa9.91□□□□□ -0.82
TNF-208ENST00000449264 PRSS29PA6NIE9 313 aa9.9□□□□□ -0.82
TNF-208ENST00000449264 REG3AQ06141 175 aa9.9□□□□□ -0.82
TNF-208ENST00000449264 LGALS9CQ6DKI2 356 aa9.9□□□□□ -0.82
TNF-208ENST00000449264 UBE2WQ96B02 151 aa9.9□□□□□ -0.82
TNF-208ENST00000449264 CST9LQ9H4G1 147 aa9.9□□□□□ -0.82
TNF-208ENST00000449264 AKR1D1P51857 326 aa9.9□□□□□ -0.83
TNF-208ENST00000449264 SPATA12Q7Z6I5 190 aa9.9□□□□□ -0.83
TNF-208ENST00000449264 LINC00476Q8WZB0 136 aa9.9□□□□□ -0.83
TNF-208ENST00000449264 PMCHL2Q9BQD1 86 aa9.9□□□□□ -0.83
TNF-208ENST00000449264 TRAV12-1A0A0B4J245 112 aa9.88□□□□□ -0.83
TNF-208ENST00000449264 ODF1Q14990 250 aa9.88□□□□□ -0.83
TNF-208ENST00000449264 PET117Q6UWS5 81 aa9.88□□□□□ -0.83
TNF-208ENST00000449264 C10orf126Q8N4M7 172 aa9.88□□□□□ -0.83
TNF-208ENST00000449264 CHTOPQ9Y3Y2 248 aaKnown RBP9.88□□□□□ -0.83
TNF-208ENST00000449264 IGLV10-54A0A075B6I4 117 aa9.87□□□□□ -0.83
TNF-208ENST00000449264 TRAV9-2A0A087WT02 112 aa9.87□□□□□ -0.83
TNF-208ENST00000449264 UBE2D1P51668 147 aa9.87□□□□□ -0.83
TNF-208ENST00000449264 ENHOQ6UWT2 76 aa9.87□□□□□ -0.83
TNF-208ENST00000449264 Q9HAA7 133 aa9.87□□□□□ -0.83
TNF-208ENST00000449264 PRR34Q9NV39 138 aa9.87□□□□□ -0.83
TNF-208ENST00000449264 MRPL35Q9NZE8 188 aaKnown RBP9.87□□□□□ -0.83
TNF-208ENST00000449264 LINC00959A0A1B0GUT2 108 aa9.87□□□□□ -0.83
TNF-208ENST00000449264 KRTAP1-5Q9BYS1 174 aa9.87□□□□□ -0.83
TNF-208ENST00000449264 A0A0J9YXV3 536 aa9.86□□□□□ -0.83
TNF-208ENST00000449264 LOC105371267A0A1B0GV96 52 aa9.86□□□□□ -0.83
TNF-208ENST00000449264 C20orf202A1L168 122 aa9.86□□□□□ -0.83
TNF-208ENST00000449264 F8VRH5 84 aa9.86□□□□□ -0.83
TNF-208ENST00000449264 LINC01545Q5VT33 79 aa9.86□□□□□ -0.83
TNF-208ENST00000449264 IGLV4-69A0A075B6H9 119 aa9.85□□□□□ -0.83
TNF-208ENST00000449264 NBDYA0A0U1RRE5 68 aa9.85□□□□□ -0.83
TNF-208ENST00000449264 SCGB1D1O95968 90 aa9.85□□□□□ -0.83
TNF-208ENST00000449264 XCL1P47992 114 aa9.85□□□□□ -0.83
TNF-208ENST00000449264 SS18Q15532 418 aa9.85□□□□□ -0.83
TNF-208ENST00000449264 CHAC1Q9BUX1 264 aa9.85□□□□□ -0.83
TNF-208ENST00000449264 IBA57-AS1B1ANH7 110 aa9.84□□□□□ -0.83
TNF-208ENST00000449264 M0R2N4 97 aa9.84□□□□□ -0.83
TNF-208ENST00000449264 CCL25O15444 150 aa9.84□□□□□ -0.83
TNF-208ENST00000449264 MIAQ16674 131 aa9.84□□□□□ -0.83
TNF-208ENST00000449264 TTC32Q5I0X7 151 aa9.84□□□□□ -0.83
TNF-208ENST00000449264 KMT2AQ03164 3969 aa9.84□□□□□ -0.83
TNF-208ENST00000449264 LINC00242Q5T6M2 205 aa9.83□□□□□ -0.84
TNF-208ENST00000449264 GEMIN7Q9H840 131 aaKnown RBP9.83□□□□□ -0.84
TNF-208ENST00000449264 IGKV2D-24A0A075B6R9 120 aa9.83□□□□□ -0.84
TNF-208ENST00000449264 C11orf86A6NJI1 115 aa9.83□□□□□ -0.84
TNF-208ENST00000449264 K7EP13 123 aa9.83□□□□□ -0.84
TNF-208ENST00000449264 DPM2O94777 84 aa9.83□□□□□ -0.84
TNF-208ENST00000449264 IGLC3P0DOY3 106 aa9.83□□□□□ -0.84
TNF-208ENST00000449264 ATOH7Q8N100 152 aa9.83□□□□□ -0.84
TNF-208ENST00000449264 CHCHD10Q8WYQ3 142 aaPredicted RBP9.83□□□□□ -0.84
TNF-208ENST00000449264 TRAV8-3A0A0A6YYJ7 113 aa9.82□□□□□ -0.84
TNF-208ENST00000449264 PLNP26678 52 aa9.82□□□□□ -0.84
TNF-208ENST00000449264 COX6A2Q02221 97 aa9.82□□□□□ -0.84
TNF-208ENST00000449264 C1orf43Q9BWL3 253 aa9.82□□□□□ -0.84
TNF-208ENST00000449264 TRAV8-4A0A0B4J246 113 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms