RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PLECQ15149 4684 aaKnown RBP13.17□□□□□ -0.3
RPS28-202ENST00000449223 TRAV12-1A0A0B4J245 112 aa13.16□□□□□ -0.3
RPS28-202ENST00000449223 RBX1P62877 108 aa13.16□□□□□ -0.3
RPS28-202ENST00000449223 MPV17L2Q567V2 206 aa13.16□□□□□ -0.3
RPS28-202ENST00000449223 DGAT2L7PQ6IED9 249 aa13.16□□□□□ -0.3
RPS28-202ENST00000449223 Q6ZN92 141 aa13.16□□□□□ -0.3
RPS28-202ENST00000449223 OR5A1Q8NGJ0 315 aa13.16□□□□□ -0.3
RPS28-202ENST00000449223 TMEM101Q96IK0 257 aa13.16□□□□□ -0.3
RPS28-202ENST00000449223 Q6ZUT4 128 aa13.15□□□□□ -0.3
RPS28-202ENST00000449223 PET117Q6UWS5 81 aa13.14□□□□□ -0.31
RPS28-202ENST00000449223 WFDC10BQ8IUB3 73 aa13.14□□□□□ -0.31
RPS28-202ENST00000449223 ZNF664Q8N3J9 261 aa13.14□□□□□ -0.31
RPS28-202ENST00000449223 OPRPNQ99935 248 aaPredicted RBP13.14□□□□□ -0.31
RPS28-202ENST00000449223 IGLV4-60A0A075B6I1 120 aa13.13□□□□□ -0.31
RPS28-202ENST00000449223 A0A087WX48 190 aa13.13□□□□□ -0.31
RPS28-202ENST00000449223 TMEM262E9PQX1 116 aa13.13□□□□□ -0.31
RPS28-202ENST00000449223 KRTDAPP60985 99 aa13.13□□□□□ -0.31
RPS28-202ENST00000449223 PMVKQ15126 192 aa13.13□□□□□ -0.31
RPS28-202ENST00000449223 ZFAND6Q6FIF0 208 aa13.13□□□□□ -0.31
RPS28-202ENST00000449223 Q8N976 141 aa13.13□□□□□ -0.31
RPS28-202ENST00000449223 PRSS1P07477 247 aa13.13□□□□□ -0.31
RPS28-202ENST00000449223 DNAH10OSP0CZ25 163 aa13.13□□□□□ -0.31
RPS28-202ENST00000449223 LINC01556Q5JQF7 62 aa13.13□□□□□ -0.31
RPS28-202ENST00000449223 TEX43Q6ZNM6 134 aa13.13□□□□□ -0.31
RPS28-202ENST00000449223 LINC01545Q5VT33 79 aa13.12□□□□□ -0.31
RPS28-202ENST00000449223 LGALS9CQ6DKI2 356 aa13.12□□□□□ -0.31
RPS28-202ENST00000449223 VCX2Q9H322 139 aa13.12□□□□□ -0.31
RPS28-202ENST00000449223 CST9LQ9H4G1 147 aa13.12□□□□□ -0.31
RPS28-202ENST00000449223 C3orf84H3BNL1 204 aa13.11□□□□□ -0.31
RPS28-202ENST00000449223 ODF1Q14990 250 aa13.11□□□□□ -0.31
RPS28-202ENST00000449223 PRSS29PA6NIE9 313 aa13.1□□□□□ -0.31
RPS28-202ENST00000449223 LYSTQ99698 3801 aa13.1□□□□□ -0.31
RPS28-202ENST00000449223 JOSD1Q15040 202 aaPredicted RBP13.09□□□□□ -0.31
RPS28-202ENST00000449223 CASC10Q5T4H9 136 aa13.09□□□□□ -0.31
RPS28-202ENST00000449223 Q8N3U1 123 aa13.09□□□□□ -0.31
RPS28-202ENST00000449223 SIVA1O15304 175 aa13.08□□□□□ -0.31
RPS28-202ENST00000449223 FAM19A3Q7Z5A8 133 aa13.08□□□□□ -0.31
RPS28-202ENST00000449223 C2orf88Q9BSF0 95 aa13.08□□□□□ -0.31
RPS28-202ENST00000449223 AKR1D1P51857 326 aa13.08□□□□□ -0.32
RPS28-202ENST00000449223 RNASE13Q5GAN3 156 aaKnown RBP13.08□□□□□ -0.32
RPS28-202ENST00000449223 ZC2HC1BQ5TFG8 222 aa13.08□□□□□ -0.32
RPS28-202ENST00000449223 PRR34Q9NV39 138 aa13.08□□□□□ -0.32
RPS28-202ENST00000449223 C20orf202A1L168 122 aa13.07□□□□□ -0.32
RPS28-202ENST00000449223 F8VRH5 84 aa13.07□□□□□ -0.32
RPS28-202ENST00000449223 H0Y8G0 127 aa13.07□□□□□ -0.32
RPS28-202ENST00000449223 K7EP13 123 aa13.07□□□□□ -0.32
RPS28-202ENST00000449223 UBE2D1P51668 147 aa13.07□□□□□ -0.32
RPS28-202ENST00000449223 ANGP03950 147 aaKnown RBP13.06□□□□□ -0.32
RPS28-202ENST00000449223 PYY3Q5JQD4 70 aa13.06□□□□□ -0.32
RPS28-202ENST00000449223 IGLV4-69A0A075B6H9 119 aa13.05□□□□□ -0.32
RPS28-202ENST00000449223 Q9H8V8 135 aa13.05□□□□□ -0.32
RPS28-202ENST00000449223 MRPL35Q9NZE8 188 aaKnown RBP13.05□□□□□ -0.32
RPS28-202ENST00000449223 CHTOPQ9Y3Y2 248 aaKnown RBP13.05□□□□□ -0.32
RPS28-202ENST00000449223 CCL25O15444 150 aa13.04□□□□□ -0.32
RPS28-202ENST00000449223 IGHV3-30P01768 117 aa13.04□□□□□ -0.32
RPS28-202ENST00000449223 IGHV3-33P01772 117 aa13.04□□□□□ -0.32
RPS28-202ENST00000449223 IGLC3P0DOY3 106 aa13.04□□□□□ -0.32
RPS28-202ENST00000449223 IGHV3-30-3P0DP02 117 aa13.04□□□□□ -0.32
RPS28-202ENST00000449223 IGHV3-30-5P0DP03 117 aa13.04□□□□□ -0.32
RPS28-202ENST00000449223 UBE2DNLQ8IWF7 75 aa13.04□□□□□ -0.32
RPS28-202ENST00000449223 LINC00269Q8N2A0 174 aa13.04□□□□□ -0.32
RPS28-202ENST00000449223 REG3AQ06141 175 aa13.03□□□□□ -0.32
RPS28-202ENST00000449223 NFE4Q86UQ8 179 aa13.03□□□□□ -0.32
RPS28-202ENST00000449223 PLNP26678 52 aa13.03□□□□□ -0.32
RPS28-202ENST00000449223 KLK12Q9UKR0 248 aa13.03□□□□□ -0.32
RPS28-202ENST00000449223 DNAH1Q9P2D7 4330 aa13.02□□□□□ -0.32
RPS28-202ENST00000449223 LINC00959A0A1B0GUT2 108 aa13.02□□□□□ -0.33
RPS28-202ENST00000449223 TINCRA0A1B0GVN0 87 aa13.02□□□□□ -0.33
RPS28-202ENST00000449223 DPM2O94777 84 aa13.02□□□□□ -0.33
RPS28-202ENST00000449223 SCGB1D1O95968 90 aa13.02□□□□□ -0.33
RPS28-202ENST00000449223 SEC11AP67812 179 aa13.02□□□□□ -0.33
RPS28-202ENST00000449223 C10orf126Q8N4M7 172 aa13.02□□□□□ -0.33
RPS28-202ENST00000449223 LINC00242Q5T6M2 205 aa13.01□□□□□ -0.33
RPS28-202ENST00000449223 ENHOQ6UWT2 76 aa13.01□□□□□ -0.33
RPS28-202ENST00000449223 PMCHL2Q9BQD1 86 aa13.01□□□□□ -0.33
RPS28-202ENST00000449223 VPS13DQ5THJ4 4388 aa13.01□□□□□ -0.33
RPS28-202ENST00000449223 TRAV13-1A0A0B4J241 112 aa13□□□□□ -0.33
RPS28-202ENST00000449223 IGKCP01834 107 aa13□□□□□ -0.33
RPS28-202ENST00000449223 SMIM6P0DI80 62 aa13□□□□□ -0.33
RPS28-202ENST00000449223 IGLV5-45A0A087WSX0 123 aa12.99□□□□□ -0.33
RPS28-202ENST00000449223 A0A0J9YXV3 536 aa12.99□□□□□ -0.33
RPS28-202ENST00000449223 IBA57-AS1B1ANH7 110 aa12.99□□□□□ -0.33
RPS28-202ENST00000449223 MIAQ16674 131 aa12.99□□□□□ -0.33
RPS28-202ENST00000449223 CHAC1Q9BUX1 264 aa12.99□□□□□ -0.33
RPS28-202ENST00000449223 TRAV9-2A0A087WT02 112 aa12.98□□□□□ -0.33
RPS28-202ENST00000449223 TRAV8-4A0A0B4J246 113 aa12.98□□□□□ -0.33
RPS28-202ENST00000449223 C11orf86A6NJI1 115 aa12.98□□□□□ -0.33
RPS28-202ENST00000449223 HERVK_113P63121 156 aa12.98□□□□□ -0.33
RPS28-202ENST00000449223 CRPP02741 224 aa12.98□□□□□ -0.33
RPS28-202ENST00000449223 SS18Q15532 418 aa12.98□□□□□ -0.33
RPS28-202ENST00000449223 CLPSL2Q6UWE3 100 aa12.98□□□□□ -0.33
RPS28-202ENST00000449223 UBE2WQ96B02 151 aa12.97□□□□□ -0.33
RPS28-202ENST00000449223 IGHV3OR16-9A0A0B4J2B5 98 aa12.95□□□□□ -0.34
RPS28-202ENST00000449223 IGKV3OR2-268A0A0C4DH90 116 aa12.95□□□□□ -0.34
RPS28-202ENST00000449223 ZNF22P17026 224 aaPredicted RBP12.95□□□□□ -0.34
RPS28-202ENST00000449223 GEMIN7Q9H840 131 aaKnown RBP12.95□□□□□ -0.34
RPS28-202ENST00000449223 TRAV8-3A0A0A6YYJ7 113 aa12.94□□□□□ -0.34
RPS28-202ENST00000449223 COX6A2Q02221 97 aa12.94□□□□□ -0.34
RPS28-202ENST00000449223 TTC32Q5I0X7 151 aa12.93□□□□□ -0.34
RPS28-202ENST00000449223 CD164L2Q6UWJ8 174 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms