RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 NFE4Q86UQ8 179 aa6.22□□□□□ -1.41
RFX3-207ENST00000449190 C6orf223Q8N319 242 aa6.22□□□□□ -1.41
RFX3-207ENST00000449190 KMT2AQ03164 3969 aa6.21□□□□□ -1.41
RFX3-207ENST00000449190 TRAV8-3A0A0A6YYJ7 113 aa6.21□□□□□ -1.42
RFX3-207ENST00000449190 A0A1B0GUV1 79 aa6.21□□□□□ -1.42
RFX3-207ENST00000449190 A0A1B0GVY2 172 aa6.21□□□□□ -1.42
RFX3-207ENST00000449190 IBA57-AS1B1ANH7 110 aa6.21□□□□□ -1.42
RFX3-207ENST00000449190 CRPP02741 224 aa6.21□□□□□ -1.42
RFX3-207ENST00000449190 FGF6P10767 208 aa6.21□□□□□ -1.42
RFX3-207ENST00000449190 ZNF25P17030 456 aaPredicted RBP6.21□□□□□ -1.42
RFX3-207ENST00000449190 Q0VG73 95 aa6.21□□□□□ -1.42
RFX3-207ENST00000449190 MPV17L2Q567V2 206 aa6.21□□□□□ -1.42
RFX3-207ENST00000449190 C20orf203Q8NBC4 194 aa6.21□□□□□ -1.42
RFX3-207ENST00000449190 OR5A1Q8NGJ0 315 aa6.21□□□□□ -1.42
RFX3-207ENST00000449190 RMI2Q96E14 147 aa6.21□□□□□ -1.42
RFX3-207ENST00000449190 KLK12Q9UKR0 248 aa6.21□□□□□ -1.42
RFX3-207ENST00000449190 DNAH6Q9C0G6 4158 aa6.21□□□□□ -1.42
RFX3-207ENST00000449190 LINC00614P0C842 121 aa6.2□□□□□ -1.42
RFX3-207ENST00000449190 BAGE3Q86Y29 109 aa6.2□□□□□ -1.42
RFX3-207ENST00000449190 Q8N976 141 aa6.2□□□□□ -1.42
RFX3-207ENST00000449190 UBE2WQ96B02 151 aa6.2□□□□□ -1.42
RFX3-207ENST00000449190 TM2D2Q9BX73 214 aa6.2□□□□□ -1.42
RFX3-207ENST00000449190 Q9HAA7 133 aa6.2□□□□□ -1.42
RFX3-207ENST00000449190 CYSLTR1Q9Y271 337 aa6.2□□□□□ -1.42
RFX3-207ENST00000449190 BIRC6Q9NR09 4857 aa6.2□□□□□ -1.42
RFX3-207ENST00000449190 LINC01549A6NIU2 74 aa6.19□□□□□ -1.42
RFX3-207ENST00000449190 MRPL52Q86TS9 123 aaKnown RBP6.19□□□□□ -1.42
RFX3-207ENST00000449190 LINC00269Q8N2A0 174 aa6.19□□□□□ -1.42
RFX3-207ENST00000449190 C18orf32Q8TCD1 76 aa6.19□□□□□ -1.42
RFX3-207ENST00000449190 TIMM21Q9BVV7 248 aa6.19□□□□□ -1.42
RFX3-207ENST00000449190 COX11Q9Y6N1 276 aa6.19□□□□□ -1.42
RFX3-207ENST00000449190 IGLV4-60A0A075B6I1 120 aa6.18□□□□□ -1.42
RFX3-207ENST00000449190 PSCAO43653 123 aa6.18□□□□□ -1.42
RFX3-207ENST00000449190 C2orf66Q6UXQ4 117 aa6.18□□□□□ -1.42
RFX3-207ENST00000449190 ZNF664Q8N3J9 261 aa6.18□□□□□ -1.42
RFX3-207ENST00000449190 KRTAP1-5Q9BYS1 174 aa6.18□□□□□ -1.42
RFX3-207ENST00000449190 SPANXA1Q9NS26 97 aa6.18□□□□□ -1.42
RFX3-207ENST00000449190 AP5S1Q9NUS5 200 aa6.18□□□□□ -1.42
RFX3-207ENST00000449190 IGKV2D-24A0A075B6R9 120 aa6.17□□□□□ -1.42
RFX3-207ENST00000449190 RPL39P62891 51 aaKnown RBP6.17□□□□□ -1.42
RFX3-207ENST00000449190 REG3AQ06141 175 aa6.17□□□□□ -1.42
RFX3-207ENST00000449190 MIAQ16674 131 aa6.17□□□□□ -1.42
RFX3-207ENST00000449190 CHCHD1Q96BP2 118 aaKnown RBP6.17□□□□□ -1.42
RFX3-207ENST00000449190 C1orf43Q9BWL3 253 aa6.17□□□□□ -1.42
RFX3-207ENST00000449190 UBE2D4Q9Y2X8 147 aa6.17□□□□□ -1.42
RFX3-207ENST00000449190 PYGO1Q9Y3Y4 419 aa6.17□□□□□ -1.42
RFX3-207ENST00000449190 CSDC2Q9Y534 153 aaKnown RBP6.17□□□□□ -1.42
RFX3-207ENST00000449190 EPPK1P58107 5090 aaKnown RBP6.17□□□□□ -1.42
RFX3-207ENST00000449190 TRAV8-4A0A0B4J246 113 aa6.16□□□□□ -1.42
RFX3-207ENST00000449190 IGKV3OR2-268A0A0C4DH90 116 aa6.16□□□□□ -1.42
RFX3-207ENST00000449190 LINC01546A6NGU7 62 aa6.16□□□□□ -1.42
RFX3-207ENST00000449190 C1orf196B1AJZ1 125 aa6.16□□□□□ -1.42
RFX3-207ENST00000449190 PAPPA-AS1Q5QFB9 102 aa6.16□□□□□ -1.42
RFX3-207ENST00000449190 CLPSL2Q6UWE3 100 aa6.16□□□□□ -1.42
RFX3-207ENST00000449190 ENHOQ6UWT2 76 aa6.16□□□□□ -1.42
RFX3-207ENST00000449190 Q6ZN92 141 aa6.16□□□□□ -1.42
RFX3-207ENST00000449190 TOMM6Q96B49 74 aa6.16□□□□□ -1.42
RFX3-207ENST00000449190 SCGB3A1Q96QR1 104 aa6.16□□□□□ -1.42
RFX3-207ENST00000449190 CDC42SE2Q9NRR3 84 aa6.16□□□□□ -1.42
RFX3-207ENST00000449190 EREGO14944 169 aa6.15□□□□□ -1.42
RFX3-207ENST00000449190 CCL25O15444 150 aa6.15□□□□□ -1.42
RFX3-207ENST00000449190 HSBP1O75506 76 aa6.15□□□□□ -1.42
RFX3-207ENST00000449190 MRPS36P82909 103 aaKnown RBP6.15□□□□□ -1.42
RFX3-207ENST00000449190 SS18Q15532 418 aa6.15□□□□□ -1.42
RFX3-207ENST00000449190 TMEM141Q96I45 108 aa6.15□□□□□ -1.42
RFX3-207ENST00000449190 VCX2Q9H322 139 aa6.15□□□□□ -1.42
RFX3-207ENST00000449190 PRR34Q9NV39 138 aa6.15□□□□□ -1.42
RFX3-207ENST00000449190 HBDP02042 147 aa6.14□□□□□ -1.43
RFX3-207ENST00000449190 NPSP0C0P6 89 aa6.14□□□□□ -1.43
RFX3-207ENST00000449190 ERASQ7Z444 233 aa6.14□□□□□ -1.43
RFX3-207ENST00000449190 C2orf88Q9BSF0 95 aa6.14□□□□□ -1.43
RFX3-207ENST00000449190 IGLV10-54A0A075B6I4 117 aa6.13□□□□□ -1.43
RFX3-207ENST00000449190 TRAV13-1A0A0B4J241 112 aa6.13□□□□□ -1.43
RFX3-207ENST00000449190 LINC00959A0A1B0GUT2 108 aa6.13□□□□□ -1.43
RFX3-207ENST00000449190 IFITM10A6NMD0 228 aa6.13□□□□□ -1.43
RFX3-207ENST00000449190 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.13□□□□□ -1.43
RFX3-207ENST00000449190 TEX43Q6ZNM6 134 aa6.13□□□□□ -1.43
RFX3-207ENST00000449190 Q6ZRN7 208 aaPredicted RBP6.13□□□□□ -1.43
RFX3-207ENST00000449190 Q6ZUT4 128 aa6.13□□□□□ -1.43
RFX3-207ENST00000449190 URB1-AS1Q96HZ7 61 aa6.13□□□□□ -1.43
RFX3-207ENST00000449190 TIMM17AQ99595 171 aa6.13□□□□□ -1.43
RFX3-207ENST00000449190 IGLV4-3A0A075B6K6 122 aa6.12□□□□□ -1.43
RFX3-207ENST00000449190 IGIPA6NJ69 53 aa6.12□□□□□ -1.43
RFX3-207ENST00000449190 HIST1H2BKO60814 126 aa6.12□□□□□ -1.43
RFX3-207ENST00000449190 ATP5LO75964 103 aa6.12□□□□□ -1.43
RFX3-207ENST00000449190 HIST1H2BJP06899 126 aa6.12□□□□□ -1.43
RFX3-207ENST00000449190 HIST1H2BOP23527 126 aa6.12□□□□□ -1.43
RFX3-207ENST00000449190 HIST1H2BBP33778 126 aa6.12□□□□□ -1.43
RFX3-207ENST00000449190 HIST1H2BDP58876 126 aa6.12□□□□□ -1.43
RFX3-207ENST00000449190 HIST1H2BCP62807 126 aa6.12□□□□□ -1.43
RFX3-207ENST00000449190 PMCHL1Q16048 86 aa6.12□□□□□ -1.43
RFX3-207ENST00000449190 HIST2H2BEQ16778 126 aa6.12□□□□□ -1.43
RFX3-207ENST00000449190 RNASE13Q5GAN3 156 aaKnown RBP6.12□□□□□ -1.43
RFX3-207ENST00000449190 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.12□□□□□ -1.43
RFX3-207ENST00000449190 CHCHD10Q8WYQ3 142 aaPredicted RBP6.12□□□□□ -1.43
RFX3-207ENST00000449190 HIST1H2BHQ93079 126 aa6.12□□□□□ -1.43
RFX3-207ENST00000449190 HIST1H2BNQ99877 126 aa6.12□□□□□ -1.43
RFX3-207ENST00000449190 HIST1H2BMQ99879 126 aa6.12□□□□□ -1.43
RFX3-207ENST00000449190 OPRPNQ99935 248 aaPredicted RBP6.12□□□□□ -1.43
RFX3-207ENST00000449190 DNAH2Q9P225 4427 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms