RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058		A8MZ25	164 aa		12.14	□□□□□ -0.47
TOM1-210	ENST00000449058	SIGMAR1	Q99720	223 aa		12.14	□□□□□ -0.47
TOM1-210	ENST00000449058	TRBV10-1	A0A0K0K1A3	114 aa		12.13	□□□□□ -0.47
TOM1-210	ENST00000449058	KRTAP1-1	Q07627	177 aa		12.13	□□□□□ -0.47
TOM1-210	ENST00000449058	CDKN2A-AS1	Q9UH64	79 aa		12.13	□□□□□ -0.47
TOM1-210	ENST00000449058		Q6ZTI0	123 aa		12.13	□□□□□ -0.47
TOM1-210	ENST00000449058	MIA	Q16674	131 aa		12.12	□□□□□ -0.47
TOM1-210	ENST00000449058	TEN1	Q86WV5	123 aa		12.12	□□□□□ -0.47
TOM1-210	ENST00000449058	LINC01006	Q8NI28	216 aa		12.12	□□□□□ -0.47
TOM1-210	ENST00000449058	C16orf95	Q9H693	158 aa		12.12	□□□□□ -0.47
TOM1-210	ENST00000449058	WNK1	Q9H4A3	2382 aa		12.12	□□□□□ -0.47
TOM1-210	ENST00000449058	FLNA	P21333	2647 aa	Known RBP	12.12	□□□□□ -0.47
TOM1-210	ENST00000449058	NF1	P21359	2839 aa		12.12	□□□□□ -0.47
TOM1-210	ENST00000449058	TRAV4	A0A0B4J268	109 aa		12.12	□□□□□ -0.47
TOM1-210	ENST00000449058		K7EQD1	137 aa		12.12	□□□□□ -0.47
TOM1-210	ENST00000449058	DGAT2L7P	Q6IED9	249 aa		12.12	□□□□□ -0.47
TOM1-210	ENST00000449058	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	12.12	□□□□□ -0.47
TOM1-210	ENST00000449058	GTSF1L	Q9H1H1	148 aa		12.12	□□□□□ -0.47
TOM1-210	ENST00000449058	GIG44	P09565	113 aa	Predicted RBP	12.11	□□□□□ -0.47
TOM1-210	ENST00000449058	CMC4	P56277	68 aa	Predicted RBP	12.11	□□□□□ -0.47
TOM1-210	ENST00000449058	RPL36A	P83881	106 aa	Known RBP	12.11	□□□□□ -0.47
TOM1-210	ENST00000449058	RPL36AL	Q969Q0	106 aa	Known RBP	12.11	□□□□□ -0.47
TOM1-210	ENST00000449058	TIMM17B	O60830	172 aa		12.11	□□□□□ -0.47
TOM1-210	ENST00000449058	PRSS2	P07478	247 aa		12.11	□□□□□ -0.47
TOM1-210	ENST00000449058	FAM19A3	Q7Z5A8	133 aa		12.11	□□□□□ -0.47
TOM1-210	ENST00000449058		H7C2G1	150 aa		12.1	□□□□□ -0.47
TOM1-210	ENST00000449058	RNASE1	P07998	156 aa	Known RBP	12.1	□□□□□ -0.47
TOM1-210	ENST00000449058	LINC00694	P0DN24	101 aa		12.1	□□□□□ -0.47
TOM1-210	ENST00000449058	NTM-AS1	Q6ZSK4	140 aa		12.1	□□□□□ -0.47
TOM1-210	ENST00000449058	PPDPFL	Q8WWR9	84 aa		12.1	□□□□□ -0.47
TOM1-210	ENST00000449058	CARD19	Q96LW7	228 aa		12.1	□□□□□ -0.47
TOM1-210	ENST00000449058	CSDC2	Q9Y534	153 aa	Known RBP	12.1	□□□□□ -0.47
TOM1-210	ENST00000449058	COX6A2	Q02221	97 aa		12.1	□□□□□ -0.47
TOM1-210	ENST00000449058	DAZ2	Q13117	558 aa	Known RBP	12.1	□□□□□ -0.47
TOM1-210	ENST00000449058	DAZ4	Q86SG3	579 aa	Known RBP	12.1	□□□□□ -0.47
TOM1-210	ENST00000449058	RNF183	Q96D59	192 aa		12.1	□□□□□ -0.47
TOM1-210	ENST00000449058	TMEM101	Q96IK0	257 aa		12.1	□□□□□ -0.47
TOM1-210	ENST00000449058	DAZ3	Q9NR90	486 aa	Known RBP	12.1	□□□□□ -0.47
TOM1-210	ENST00000449058	NDUFA1	O15239	70 aa		12.09	□□□□□ -0.47
TOM1-210	ENST00000449058	LINC00242	Q5T6M2	205 aa		12.09	□□□□□ -0.47
TOM1-210	ENST00000449058	HIST2H2BC	Q6DN03	193 aa		12.09	□□□□□ -0.47
TOM1-210	ENST00000449058	TRBV30	A0A0K0K1B3	111 aa		12.08	□□□□□ -0.47
TOM1-210	ENST00000449058		M0QXV9	152 aa		12.08	□□□□□ -0.47
TOM1-210	ENST00000449058	SCGB1A1	P11684	91 aa		12.08	□□□□□ -0.47
TOM1-210	ENST00000449058	PLA2G2A	P14555	144 aa		12.08	□□□□□ -0.47
TOM1-210	ENST00000449058	FAM110A	Q9BQ89	295 aa		12.08	□□□□□ -0.47
TOM1-210	ENST00000449058	IGLV5-39	A0A0G2JS06	123 aa		12.08	□□□□□ -0.48
TOM1-210	ENST00000449058	HERVK_113	P63121	156 aa		12.08	□□□□□ -0.48
TOM1-210	ENST00000449058	PLAC8L1	A1L4L8	177 aa		12.07	□□□□□ -0.48
TOM1-210	ENST00000449058		Q1RN00	199 aa		12.07	□□□□□ -0.48
TOM1-210	ENST00000449058	NOP10	Q9NPE3	64 aa	Known RBP	12.07	□□□□□ -0.48
TOM1-210	ENST00000449058	C19orf73	Q9NVV2	129 aa		12.07	□□□□□ -0.48
TOM1-210	ENST00000449058	TENM4	Q6N022	2769 aa		12.07	□□□□□ -0.48
TOM1-210	ENST00000449058	IGLV1-51	P01701	117 aa		12.07	□□□□□ -0.48
TOM1-210	ENST00000449058	YAE1D1	Q9NRH1	226 aa		12.07	□□□□□ -0.48
TOM1-210	ENST00000449058	NBPF19	A0A087WUL8	3843 aa		12.07	□□□□□ -0.48
TOM1-210	ENST00000449058	PDZD2	O15018	2839 aa		12.07	□□□□□ -0.48
TOM1-210	ENST00000449058	SLC25A20	O43772	301 aa		12.06	□□□□□ -0.48
TOM1-210	ENST00000449058		J3QKU1	62 aa		12.06	□□□□□ -0.48
TOM1-210	ENST00000449058	TRIAP1	O43715	76 aa		12.06	□□□□□ -0.48
TOM1-210	ENST00000449058	IFITM1	P13164	125 aa		12.06	□□□□□ -0.48
TOM1-210	ENST00000449058	ANKRD29	Q8N6D5	301 aa		12.06	□□□□□ -0.48
TOM1-210	ENST00000449058	C16orf74	Q96GX8	76 aa		12.06	□□□□□ -0.48
TOM1-210	ENST00000449058	SETX	Q7Z333	2677 aa	Known RBP	12.05	□□□□□ -0.48
TOM1-210	ENST00000449058		C9JAW5	83 aa		12.05	□□□□□ -0.48
TOM1-210	ENST00000449058	SMAGP	Q0VAQ4	97 aa		12.05	□□□□□ -0.48
TOM1-210	ENST00000449058	WFDC10A	Q9H1F0	79 aa		12.05	□□□□□ -0.48
TOM1-210	ENST00000449058	GAGE12J	A6NER3	117 aa		12.05	□□□□□ -0.48
TOM1-210	ENST00000449058	GAGE4	Q13068	117 aa		12.05	□□□□□ -0.48
TOM1-210	ENST00000449058	GAGE5	Q13069	117 aa		12.05	□□□□□ -0.48
TOM1-210	ENST00000449058	ATXN8	Q156A1	80 aa		12.05	□□□□□ -0.48
TOM1-210	ENST00000449058	CDIP1	Q9H305	208 aa		12.05	□□□□□ -0.48
TOM1-210	ENST00000449058	NDUFA7	O95182	113 aa		12.04	□□□□□ -0.48
TOM1-210	ENST00000449058	CDC42SE2	Q9NRR3	84 aa		12.04	□□□□□ -0.48
TOM1-210	ENST00000449058	CCDC168	Q8NDH2	2452 aa		12.04	□□□□□ -0.48
TOM1-210	ENST00000449058	CSNK1G2-AS1	Q8NCQ2	148 aa		12.04	□□□□□ -0.48
TOM1-210	ENST00000449058	LINC01600	Q96MT4	127 aa		12.04	□□□□□ -0.48
TOM1-210	ENST00000449058	SMIM1	B2RUZ4	78 aa		12.03	□□□□□ -0.48
TOM1-210	ENST00000449058	NPC2	P61916	151 aa		12.03	□□□□□ -0.48
TOM1-210	ENST00000449058	LINC01620	Q4KN68	170 aa		12.03	□□□□□ -0.48
TOM1-210	ENST00000449058	ICOS	Q9Y6W8	199 aa		12.03	□□□□□ -0.48
TOM1-210	ENST00000449058	CUBN	O60494	3623 aa		12.03	□□□□□ -0.48
TOM1-210	ENST00000449058	RPL35A	P18077	110 aa	Known RBP	12.02	□□□□□ -0.49
TOM1-210	ENST00000449058	OVOL2	Q9BRP0	275 aa		12.02	□□□□□ -0.49
TOM1-210	ENST00000449058		Q9H8V8	135 aa		12.01	□□□□□ -0.49
TOM1-210	ENST00000449058	TRAV13-1	A0A0B4J241	112 aa		12.01	□□□□□ -0.49
TOM1-210	ENST00000449058	GAGE7	O76087	117 aa		12.01	□□□□□ -0.49
TOM1-210	ENST00000449058	GAGE12F	P0CL80	117 aa		12.01	□□□□□ -0.49
TOM1-210	ENST00000449058	GAGE12G	P0CL81	117 aa		12.01	□□□□□ -0.49
TOM1-210	ENST00000449058	GAGE12I	P0CL82	117 aa		12.01	□□□□□ -0.49
TOM1-210	ENST00000449058	CIRBP	Q14011	172 aa	Known RBP	12.01	□□□□□ -0.49
TOM1-210	ENST00000449058	DAND5	Q8N907	189 aa		12.01	□□□□□ -0.49
TOM1-210	ENST00000449058	TRBV6-4	A0A1B0GX49	114 aa		12	□□□□□ -0.49
TOM1-210	ENST00000449058		F5H768	121 aa		12	□□□□□ -0.49
TOM1-210	ENST00000449058	TMEM243	Q9BU79	118 aa		12	□□□□□ -0.49
TOM1-210	ENST00000449058	NIPBL	Q6KC79	2804 aa	eCLIP	12	□□□□□ -0.49
TOM1-210	ENST00000449058	TRGV2	A0A075B6R0	118 aa		12	□□□□□ -0.49
TOM1-210	ENST00000449058	TRAV26-1	A0A087WT03	109 aa		11.99	□□□□□ -0.49
TOM1-210	ENST00000449058	HILS1	P60008	231 aa		11.99	□□□□□ -0.49
TOM1-210	ENST00000449058	ZNF625	Q96I27	306 aa	Predicted RBP	11.99	□□□□□ -0.49

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