RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 RNF183Q96D59 192 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 AMELXQ99217 191 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 H7C423 109 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 TCTAP57738 103 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 RNF151Q2KHN1 245 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 C2orf91Q6ZV80 131 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 CSDC2Q9Y534 153 aaKnown RBP7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 ATRQ13535 2644 aa7.48□□□□□ -1.21
VIPAS39-203ENST00000448935 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.48□□□□□ -1.21
VIPAS39-203ENST00000448935 TEX48A0A1B0GUV7 120 aa7.48□□□□□ -1.21
VIPAS39-203ENST00000448935 IGKV2-29A2NJV5 120 aaPredicted RBP7.48□□□□□ -1.21
VIPAS39-203ENST00000448935 HSD52Q0P140 79 aa7.48□□□□□ -1.21
VIPAS39-203ENST00000448935 MPV17L2Q567V2 206 aa7.48□□□□□ -1.21
VIPAS39-203ENST00000448935 TMEM170BQ5T4T1 132 aa7.48□□□□□ -1.21
VIPAS39-203ENST00000448935 FAM222AQ5U5X8 452 aa7.48□□□□□ -1.21
VIPAS39-203ENST00000448935 CHAC1Q9BUX1 264 aa7.48□□□□□ -1.21
VIPAS39-203ENST00000448935 TRBV25-1A0A075B6N4 114 aa7.47□□□□□ -1.21
VIPAS39-203ENST00000448935 TRAV8-6A0A0B4J262 113 aa7.47□□□□□ -1.21
VIPAS39-203ENST00000448935 IGHV4-28A0A0C4DH34 117 aa7.47□□□□□ -1.21
VIPAS39-203ENST00000448935 UBE2L6O14933 153 aa7.47□□□□□ -1.21
VIPAS39-203ENST00000448935 OPRPNQ99935 248 aaPredicted RBP7.47□□□□□ -1.21
VIPAS39-203ENST00000448935 TMEM243Q9BU79 118 aa7.47□□□□□ -1.21
VIPAS39-203ENST00000448935 TP73-AS1Q9UF72 201 aa7.47□□□□□ -1.21
VIPAS39-203ENST00000448935 PRO0255Q9UI72 69 aa7.47□□□□□ -1.21
VIPAS39-203ENST00000448935 DNHD1Q96M86 4753 aa7.47□□□□□ -1.21
VIPAS39-203ENST00000448935 C9orf118A6NHY6 69 aa7.46□□□□□ -1.21
VIPAS39-203ENST00000448935 SPART-AS1P0CW21 52 aa7.46□□□□□ -1.21
VIPAS39-203ENST00000448935 DAD1P61803 113 aa7.46□□□□□ -1.21
VIPAS39-203ENST00000448935 SEC11AP67812 179 aa7.46□□□□□ -1.21
VIPAS39-203ENST00000448935 BVES-AS1Q5T3Y7 98 aa7.46□□□□□ -1.21
VIPAS39-203ENST00000448935 MYMXA0A1B0GTQ4 84 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 NTM-AS1Q6ZSK4 140 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 Q8NAQ8 132 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 TMEM101Q96IK0 257 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 TENM1Q9UKZ4 2725 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 NOTCH3Q9UM47 2321 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 A0A0J9YXV3 536 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 A0A1B0GV90 55 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 TINCRA0A1B0GVN0 87 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 ATP5G1P05496 136 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 LINC00694P0DN24 101 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 ZNF25P17030 456 aaPredicted RBP7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 KRTAP10-11P60412 298 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 TAL2Q16559 108 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 AMMECR1LQ6DCA0 310 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 CEMP1Q6PRD7 247 aaPredicted RBP7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 SBSPONQ8IVN8 264 aa7.45□□□□□ -1.22
VIPAS39-203ENST00000448935 TMEM223A0PJW6 202 aa7.44□□□□□ -1.22
VIPAS39-203ENST00000448935 ZNF22P17026 224 aaPredicted RBP7.44□□□□□ -1.22
VIPAS39-203ENST00000448935 Q6ZUT4 128 aa7.44□□□□□ -1.22
VIPAS39-203ENST00000448935 OR5A1Q8NGJ0 315 aa7.44□□□□□ -1.22
VIPAS39-203ENST00000448935 FAM104AQ969W3 186 aa7.44□□□□□ -1.22
VIPAS39-203ENST00000448935 PLEKHB2Q96CS7 222 aa7.44□□□□□ -1.22
VIPAS39-203ENST00000448935 COL6A5A8TX70 2615 aa7.44□□□□□ -1.22
VIPAS39-203ENST00000448935 TRBV6-8A0A0A6YYG3 113 aa7.43□□□□□ -1.22
VIPAS39-203ENST00000448935 LOC100131303A0A0U1RQF7 123 aa7.43□□□□□ -1.22
VIPAS39-203ENST00000448935 A6NDN8 102 aa7.43□□□□□ -1.22
VIPAS39-203ENST00000448935 ZNF815PA8K554 130 aa7.43□□□□□ -1.22
VIPAS39-203ENST00000448935 LEPROTO15243 131 aa7.43□□□□□ -1.22
VIPAS39-203ENST00000448935 PAX4O43316 350 aa7.43□□□□□ -1.22
VIPAS39-203ENST00000448935 LGALS3P17931 250 aaKnown RBP7.43□□□□□ -1.22
VIPAS39-203ENST00000448935 MAPKAPK5-AS1Q8N8E1 139 aa7.43□□□□□ -1.22
VIPAS39-203ENST00000448935 ATP6V0E2Q8NHE4 81 aa7.43□□□□□ -1.22
VIPAS39-203ENST00000448935 ORAOV1Q8WV07 137 aa7.43□□□□□ -1.22
VIPAS39-203ENST00000448935 TTTY13Q9BZ97 58 aa7.43□□□□□ -1.22
VIPAS39-203ENST00000448935 GEMIN7Q9H840 131 aaKnown RBP7.43□□□□□ -1.22
VIPAS39-203ENST00000448935 NBEAL1Q6ZS30 2694 aa7.43□□□□□ -1.22
VIPAS39-203ENST00000448935 H3BRM9 83 aa7.42□□□□□ -1.22
VIPAS39-203ENST00000448935 GCSHP23434 173 aa7.42□□□□□ -1.22
VIPAS39-203ENST00000448935 UBE2D1P51668 147 aa7.42□□□□□ -1.22
VIPAS39-203ENST00000448935 TIRAPP58753 221 aa7.42□□□□□ -1.22
VIPAS39-203ENST00000448935 STAB1Q9NY15 2570 aa7.42□□□□□ -1.22
VIPAS39-203ENST00000448935 J3QQQ9 107 aa7.41□□□□□ -1.22
VIPAS39-203ENST00000448935 HERVK_113P63121 156 aa7.41□□□□□ -1.22
VIPAS39-203ENST00000448935 SCGB1D4Q6XE38 83 aa7.41□□□□□ -1.22
VIPAS39-203ENST00000448935 FAM19A3Q7Z5A8 133 aa7.41□□□□□ -1.22
VIPAS39-203ENST00000448935 CDC42SE2Q9NRR3 84 aa7.41□□□□□ -1.22
VIPAS39-203ENST00000448935 VWFP04275 2813 aa7.41□□□□□ -1.22
VIPAS39-203ENST00000448935 DEFB4AO15263 64 aa7.41□□□□□ -1.22
VIPAS39-203ENST00000448935 RNASE13Q5GAN3 156 aaKnown RBP7.41□□□□□ -1.22
VIPAS39-203ENST00000448935 SH2D6Q7Z4S9 175 aa7.41□□□□□ -1.22
VIPAS39-203ENST00000448935 TRAV26-1A0A087WT03 109 aa7.4□□□□□ -1.22
VIPAS39-203ENST00000448935 LINC00469Q8N7U9 141 aa7.4□□□□□ -1.22
VIPAS39-203ENST00000448935 CHCHD5Q9BSY4 110 aa7.4□□□□□ -1.22
VIPAS39-203ENST00000448935 IGLV5-45A0A087WSX0 123 aa7.39□□□□□ -1.23
VIPAS39-203ENST00000448935 IGHV1-58A0A0C4DH39 117 aa7.39□□□□□ -1.23
VIPAS39-203ENST00000448935 G3V4G9 280 aa7.39□□□□□ -1.23
VIPAS39-203ENST00000448935 CEND1Q8N111 149 aa7.39□□□□□ -1.23
VIPAS39-203ENST00000448935 HIST1H4GQ99525 98 aa7.39□□□□□ -1.23
VIPAS39-203ENST00000448935 TM2D2Q9BX73 214 aa7.39□□□□□ -1.23
VIPAS39-203ENST00000448935 CELA1Q9UNI1 258 aa7.39□□□□□ -1.23
VIPAS39-203ENST00000448935 MRPL23Q16540 153 aaKnown RBP7.38□□□□□ -1.23
VIPAS39-203ENST00000448935 C11orf68Q9H3H3 251 aaKnown RBP7.38□□□□□ -1.23
VIPAS39-203ENST00000448935 COX11Q9Y6N1 276 aa7.38□□□□□ -1.23
VIPAS39-203ENST00000448935 F5H768 121 aa7.38□□□□□ -1.23
VIPAS39-203ENST00000448935 IGHV3-30-3P0DP02 117 aa7.38□□□□□ -1.23
VIPAS39-203ENST00000448935 GAGE6Q13070 117 aa7.38□□□□□ -1.23
VIPAS39-203ENST00000448935 LINC00242Q5T6M2 205 aa7.38□□□□□ -1.23
VIPAS39-203ENST00000448935 VSIG2Q96IQ7 327 aa7.38□□□□□ -1.23
VIPAS39-203ENST00000448935 SPANXB1Q9NS25 103 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms