RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 HIGD1BQ9P298 99 aa4.88□□□□□ -1.63
RFC4-209ENST00000448497 UBE2D4Q9Y2X8 147 aa4.88□□□□□ -1.63
RFC4-209ENST00000448497 COL6A5A8TX70 2615 aa4.87□□□□□ -1.63
RFC4-209ENST00000448497 TRGV4A0A0C4DH28 118 aa4.87□□□□□ -1.63
RFC4-209ENST00000448497 E9PLD3 99 aa4.87□□□□□ -1.63
RFC4-209ENST00000448497 KRTAP10-11P60412 298 aa4.87□□□□□ -1.63
RFC4-209ENST00000448497 DEFB135Q30KP9 77 aa4.87□□□□□ -1.63
RFC4-209ENST00000448497 FAM19A3Q7Z5A8 133 aa4.87□□□□□ -1.63
RFC4-209ENST00000448497 OR11H2Q8NH07 326 aa4.87□□□□□ -1.63
RFC4-209ENST00000448497 VCX2Q9H322 139 aa4.87□□□□□ -1.63
RFC4-209ENST00000448497 PRO0255Q9UI72 69 aa4.87□□□□□ -1.63
RFC4-209ENST00000448497 PKD1L1Q8TDX9 2849 aa4.87□□□□□ -1.63
RFC4-209ENST00000448497 IGKV2D-26A0A0A0MRZ7 120 aa4.86□□□□□ -1.63
RFC4-209ENST00000448497 IGHV4-28A0A0C4DH34 117 aa4.86□□□□□ -1.63
RFC4-209ENST00000448497 HERVK_113P61574 105 aa4.86□□□□□ -1.63
RFC4-209ENST00000448497 FAM222AQ5U5X8 452 aa4.86□□□□□ -1.63
RFC4-209ENST00000448497 NTM-AS1Q6ZSK4 140 aa4.86□□□□□ -1.63
RFC4-209ENST00000448497 NBEAL2Q6ZNJ1 2754 aa4.86□□□□□ -1.63
RFC4-209ENST00000448497 TINCRA0A1B0GVN0 87 aa4.85□□□□□ -1.63
RFC4-209ENST00000448497 GAGE12JA6NER3 117 aa4.85□□□□□ -1.63
RFC4-209ENST00000448497 SPART-AS1P0CW21 52 aa4.85□□□□□ -1.63
RFC4-209ENST00000448497 DEFB130BP0DP73 79 aa4.85□□□□□ -1.63
RFC4-209ENST00000448497 DEFB130AP0DP74 79 aa4.85□□□□□ -1.63
RFC4-209ENST00000448497 GYPEP15421 78 aa4.85□□□□□ -1.63
RFC4-209ENST00000448497 ZNF25P17030 456 aaPredicted RBP4.85□□□□□ -1.63
RFC4-209ENST00000448497 NMUP48645 174 aa4.85□□□□□ -1.63
RFC4-209ENST00000448497 GAGE1Q13065 139 aa4.85□□□□□ -1.63
RFC4-209ENST00000448497 GAGE4Q13068 117 aa4.85□□□□□ -1.63
RFC4-209ENST00000448497 GAGE5Q13069 117 aa4.85□□□□□ -1.63
RFC4-209ENST00000448497 PCP2Q8IVA1 136 aa4.85□□□□□ -1.63
RFC4-209ENST00000448497 PHLDA1Q8WV24 401 aaPredicted RBP4.85□□□□□ -1.63
RFC4-209ENST00000448497 TMEM243Q9BU79 118 aa4.85□□□□□ -1.63
RFC4-209ENST00000448497 C11orf68Q9H3H3 251 aaKnown RBP4.85□□□□□ -1.63
RFC4-209ENST00000448497 ANK2Q01484 3957 aa4.85□□□□□ -1.63
RFC4-209ENST00000448497 TRBV25-1A0A075B6N4 114 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 IGLV5-45A0A087WSX0 123 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 TRAV26-1A0A087WT03 109 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 TRBV6-8A0A0A6YYG3 113 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 IGHV3-38A0A0C4DH36 116 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 TMEM223A0PJW6 202 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 ATP5G1P05496 136 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 EMP1P54849 157 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 TIRAPP58753 221 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 DAD1P61803 113 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 SEC11AP67812 179 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 HSD52Q0P140 79 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 TAL2Q16559 108 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 COL5A1-AS1Q5SY13 56 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 KPRPQ5T749 579 aaPredicted RBP4.84□□□□□ -1.63
RFC4-209ENST00000448497 SH2D6Q7Z4S9 175 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 DEFB104AQ8WTQ1 72 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 OPRPNQ99935 248 aaPredicted RBP4.84□□□□□ -1.63
RFC4-209ENST00000448497 CHAC1Q9BUX1 264 aa4.84□□□□□ -1.63
RFC4-209ENST00000448497 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.83□□□□□ -1.64
RFC4-209ENST00000448497 A0A0J9YXV3 536 aa4.83□□□□□ -1.64
RFC4-209ENST00000448497 LOC100131303A0A0U1RQF7 123 aa4.83□□□□□ -1.64
RFC4-209ENST00000448497 MYMXA0A1B0GTQ4 84 aa4.83□□□□□ -1.64
RFC4-209ENST00000448497 IGKV2-29A2NJV5 120 aaPredicted RBP4.83□□□□□ -1.64
RFC4-209ENST00000448497 H3BNG1 76 aa4.83□□□□□ -1.64
RFC4-209ENST00000448497 ZNF22P17026 224 aaPredicted RBP4.83□□□□□ -1.64
RFC4-209ENST00000448497 UBE2D1P51668 147 aa4.83□□□□□ -1.64
RFC4-209ENST00000448497 MPV17L2Q567V2 206 aa4.83□□□□□ -1.64
RFC4-209ENST00000448497 BVES-AS1Q5T3Y7 98 aa4.83□□□□□ -1.64
RFC4-209ENST00000448497 DGAT2L7PQ6IED9 249 aa4.83□□□□□ -1.64
RFC4-209ENST00000448497 ATP6V0E2Q8NHE4 81 aa4.83□□□□□ -1.64
RFC4-209ENST00000448497 CDC42SE2Q9NRR3 84 aa4.83□□□□□ -1.64
RFC4-209ENST00000448497 A0A1B0GUV1 79 aa4.82□□□□□ -1.64
RFC4-209ENST00000448497 LEPROTO15243 131 aa4.82□□□□□ -1.64
RFC4-209ENST00000448497 HINT1P49773 126 aaPredicted RBP4.82□□□□□ -1.64
RFC4-209ENST00000448497 TMEM170BQ5T4T1 132 aa4.82□□□□□ -1.64
RFC4-209ENST00000448497 CEMP1Q6PRD7 247 aaPredicted RBP4.82□□□□□ -1.64
RFC4-209ENST00000448497 Q6ZUT4 128 aa4.82□□□□□ -1.64
RFC4-209ENST00000448497 LURAP1LQ8IV03 231 aa4.82□□□□□ -1.64
RFC4-209ENST00000448497 MAPKAPK5-AS1Q8N8E1 139 aa4.82□□□□□ -1.64
RFC4-209ENST00000448497 OR5A1Q8NGJ0 315 aa4.82□□□□□ -1.64
RFC4-209ENST00000448497 PLEKHB2Q96CS7 222 aa4.82□□□□□ -1.64
RFC4-209ENST00000448497 VSIG2Q96IQ7 327 aa4.82□□□□□ -1.64
RFC4-209ENST00000448497 TP73-AS1Q9UF72 201 aa4.82□□□□□ -1.64
RFC4-209ENST00000448497 TRAV8-6A0A0B4J262 113 aa4.81□□□□□ -1.64
RFC4-209ENST00000448497 G3V4G9 280 aa4.81□□□□□ -1.64
RFC4-209ENST00000448497 J3QQQ9 107 aa4.81□□□□□ -1.64
RFC4-209ENST00000448497 UBE2L6O14933 153 aa4.81□□□□□ -1.64
RFC4-209ENST00000448497 HERVK_113P63121 156 aa4.81□□□□□ -1.64
RFC4-209ENST00000448497 ORAOV1Q8WV07 137 aa4.81□□□□□ -1.64
RFC4-209ENST00000448497 TMEM101Q96IK0 257 aa4.81□□□□□ -1.64
RFC4-209ENST00000448497 TM2D2Q9BX73 214 aa4.81□□□□□ -1.64
RFC4-209ENST00000448497 CELA1Q9UNI1 258 aa4.81□□□□□ -1.64
RFC4-209ENST00000448497 IGHV1-58A0A0C4DH39 117 aa4.8□□□□□ -1.64
RFC4-209ENST00000448497 ZNF815PA8K554 130 aa4.8□□□□□ -1.64
RFC4-209ENST00000448497 H3BRM9 83 aa4.8□□□□□ -1.64
RFC4-209ENST00000448497 CCL25O15444 150 aa4.8□□□□□ -1.64
RFC4-209ENST00000448497 MRPL23Q16540 153 aaKnown RBP4.8□□□□□ -1.64
RFC4-209ENST00000448497 AMMECR1LQ6DCA0 310 aa4.8□□□□□ -1.64
RFC4-209ENST00000448497 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
RFC4-209ENST00000448497 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
RFC4-209ENST00000448497 TTTY13Q9BZ97 58 aa4.8□□□□□ -1.64
RFC4-209ENST00000448497 GEMIN7Q9H840 131 aaKnown RBP4.8□□□□□ -1.64
RFC4-209ENST00000448497 SPANXB1Q9NS25 103 aaPredicted RBP4.8□□□□□ -1.64
RFC4-209ENST00000448497 NBEAL1Q6ZS30 2694 aa4.8□□□□□ -1.64
RFC4-209ENST00000448497 IGLV5-39A0A0G2JS06 123 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms