RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 ARL2-SNX15V9GYD0 113 aa1.45□□□□□ -2.18
PMS1-216ENST00000447734 SORL1Q92673 2214 aa1.45□□□□□ -2.18
PMS1-216ENST00000447734 MED14O60244 1454 aa1.44□□□□□ -2.18
PMS1-216ENST00000447734 A0A096LNT2 108 aa1.44□□□□□ -2.18
PMS1-216ENST00000447734 F2Z2F3 143 aa1.44□□□□□ -2.18
PMS1-216ENST00000447734 K7EP34 96 aa1.44□□□□□ -2.18
PMS1-216ENST00000447734 LY6G6CO95867 125 aa1.44□□□□□ -2.18
PMS1-216ENST00000447734 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
PMS1-216ENST00000447734 VMO1Q7Z5L0 202 aa1.44□□□□□ -2.18
PMS1-216ENST00000447734 C20orf78Q9BR46 151 aa1.44□□□□□ -2.18
PMS1-216ENST00000447734 NXT2Q9NPJ8 142 aaKnown RBP1.44□□□□□ -2.18
PMS1-216ENST00000447734 KDM5AP29375 1690 aaKnown RBP1.44□□□□□ -2.18
PMS1-216ENST00000447734 SIPA1L3O60292 1781 aaPredicted RBP1.44□□□□□ -2.18
PMS1-216ENST00000447734 H7BZZ5 65 aa1.43□□□□□ -2.18
PMS1-216ENST00000447734 UQCR11O14957 56 aa1.43□□□□□ -2.18
PMS1-216ENST00000447734 CYB5AP00167 134 aa1.43□□□□□ -2.18
PMS1-216ENST00000447734 PRB1P04280 392 aa1.43□□□□□ -2.18
PMS1-216ENST00000447734 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.43□□□□□ -2.18
PMS1-216ENST00000447734 LCN9Q8WX39 176 aa1.43□□□□□ -2.18
PMS1-216ENST00000447734 LINC01558Q9Y6Z2 57 aa1.43□□□□□ -2.18
PMS1-216ENST00000447734 TOP2BQ02880 1626 aa1.43□□□□□ -2.18
PMS1-216ENST00000447734 MYOM1P52179 1685 aa1.42□□□□□ -2.18
PMS1-216ENST00000447734 ABCC3O15438 1527 aa1.42□□□□□ -2.18
PMS1-216ENST00000447734 UQCRHP07919 91 aa1.42□□□□□ -2.18
PMS1-216ENST00000447734 PMCHL1Q16048 86 aa1.42□□□□□ -2.18
PMS1-216ENST00000447734 FAM223AQ8IWN6 122 aa1.42□□□□□ -2.18
PMS1-216ENST00000447734 SMIM11BQ8TCY0 68 aa1.42□□□□□ -2.18
PMS1-216ENST00000447734 SMIM4Q8WVI0 70 aa1.42□□□□□ -2.18
PMS1-216ENST00000447734 S100A16Q96FQ6 103 aaKnown RBP1.42□□□□□ -2.18
PMS1-216ENST00000447734 SBF2Q86WG5 1849 aa1.42□□□□□ -2.18
PMS1-216ENST00000447734 ABCA1O95477 2261 aa1.42□□□□□ -2.18
PMS1-216ENST00000447734 RP1L1Q8IWN7 2480 aaPredicted RBP1.42□□□□□ -2.18
PMS1-216ENST00000447734 ZMYM4Q5VZL5 1548 aa1.41□□□□□ -2.18
PMS1-216ENST00000447734 ARHGEF12Q9NZN5 1544 aa1.41□□□□□ -2.18
PMS1-216ENST00000447734 TRBV25-1A0A075B6N4 114 aa1.41□□□□□ -2.18
PMS1-216ENST00000447734 SAA2P0DJI9 122 aaPredicted RBP1.41□□□□□ -2.18
PMS1-216ENST00000447734 ZNF137PP52743 207 aa1.41□□□□□ -2.18
PMS1-216ENST00000447734 RPL37P61927 97 aaKnown RBP1.41□□□□□ -2.18
PMS1-216ENST00000447734 PEA15Q15121 130 aa1.41□□□□□ -2.18
PMS1-216ENST00000447734 CFAP126Q5VTH2 177 aa1.41□□□□□ -2.18
PMS1-216ENST00000447734 FBN1P35555 2871 aaKnown RBP1.41□□□□□ -2.18
PMS1-216ENST00000447734 HMGXB3Q12766 1538 aa1.4□□□□□ -2.18
PMS1-216ENST00000447734 EHBP1L1Q8N3D4 1523 aa1.4□□□□□ -2.18
PMS1-216ENST00000447734 NMBP08949 121 aa1.4□□□□□ -2.19
PMS1-216ENST00000447734 FXYD6P3P58550 94 aa1.4□□□□□ -2.19
PMS1-216ENST00000447734 KRTAP21-3Q3LHN1 58 aa1.4□□□□□ -2.19
PMS1-216ENST00000447734 DIP2CQ9Y2E4 1556 aa1.39□□□□□ -2.19
PMS1-216ENST00000447734 PLIN4Q96Q06 1357 aa1.39□□□□□ -2.19
PMS1-216ENST00000447734 TRIOBPQ9H2D6 2365 aa1.39□□□□□ -2.19
PMS1-216ENST00000447734 GVQW2A0A096LPI5 108 aaPredicted RBP1.39□□□□□ -2.19
PMS1-216ENST00000447734 FAM223BA6NKX1 122 aa1.39□□□□□ -2.19
PMS1-216ENST00000447734 ZNF815PA8K554 130 aa1.39□□□□□ -2.19
PMS1-216ENST00000447734 M0R3E3 92 aa1.39□□□□□ -2.19
PMS1-216ENST00000447734 SPINT3P49223 89 aa1.39□□□□□ -2.19
PMS1-216ENST00000447734 COX17Q14061 63 aa1.39□□□□□ -2.19
PMS1-216ENST00000447734 Q6ZRX8 168 aa1.39□□□□□ -2.19
PMS1-216ENST00000447734 MON2Q7Z3U7 1717 aa1.39□□□□□ -2.19
PMS1-216ENST00000447734 IFT172Q9UG01 1749 aa1.39□□□□□ -2.19
PMS1-216ENST00000447734 UACAQ9BZF9 1416 aa1.39□□□□□ -2.19
PMS1-216ENST00000447734 COL4A6Q14031 1691 aa1.39□□□□□ -2.19
PMS1-216ENST00000447734 ARHGEF5Q12774 1597 aa1.38□□□□□ -2.19
PMS1-216ENST00000447734 MAP2P11137 1827 aaKnown RBP1.38□□□□□ -2.19
PMS1-216ENST00000447734 A0A1B0GWA3 101 aa1.38□□□□□ -2.19
PMS1-216ENST00000447734 C10orf142B7Z368 130 aa1.38□□□□□ -2.19
PMS1-216ENST00000447734 MGPP08493 103 aa1.38□□□□□ -2.19
PMS1-216ENST00000447734 GCHFRP30047 84 aa1.38□□□□□ -2.19
PMS1-216ENST00000447734 PSMG4Q5JS54 123 aa1.38□□□□□ -2.19
PMS1-216ENST00000447734 HIGD1BQ9P298 99 aa1.38□□□□□ -2.19
PMS1-216ENST00000447734 RABAC1Q9UI14 185 aa1.38□□□□□ -2.19
PMS1-216ENST00000447734 EDC4Q6P2E9 1401 aaKnown RBP1.38□□□□□ -2.19
PMS1-216ENST00000447734 ARHGAP35Q9NRY4 1499 aa1.37□□□□□ -2.19
PMS1-216ENST00000447734 RGPD4Q7Z3J3 1758 aa1.37□□□□□ -2.19
PMS1-216ENST00000447734 CNTRLQ7Z7A1 2325 aa1.37□□□□□ -2.19
PMS1-216ENST00000447734 CLTCQ00610 1675 aaKnown RBP1.37□□□□□ -2.19
PMS1-216ENST00000447734 KIF21AQ7Z4S6 1674 aa1.37□□□□□ -2.19
PMS1-216ENST00000447734 K7EIL1 84 aa1.37□□□□□ -2.19
PMS1-216ENST00000447734 SMIM11AP58511 58 aa1.37□□□□□ -2.19
PMS1-216ENST00000447734 TDRG1Q3Y452 100 aa1.37□□□□□ -2.19
PMS1-216ENST00000447734 S100A13Q99584 98 aa1.37□□□□□ -2.19
PMS1-216ENST00000447734 UNC13BO14795 1591 aa1.37□□□□□ -2.19
PMS1-216ENST00000447734 ATP10BO94823 1461 aa1.37□□□□□ -2.19
PMS1-216ENST00000447734 F5P12259 2224 aa1.36□□□□□ -2.19
PMS1-216ENST00000447734 CDK13Q14004 1512 aaKnown RBP1.36□□□□□ -2.19
PMS1-216ENST00000447734 ZNF236Q9UL36 1845 aa1.36□□□□□ -2.19
PMS1-216ENST00000447734 BCE1O60756 84 aa1.36□□□□□ -2.19
PMS1-216ENST00000447734 CEP162Q5TB80 1403 aa1.36□□□□□ -2.19
PMS1-216ENST00000447734 ZNF720Q7Z2F6 126 aa1.36□□□□□ -2.19
PMS1-216ENST00000447734 FANCAO15360 1455 aa1.36□□□□□ -2.19
PMS1-216ENST00000447734 EPRSP07814 1512 aaKnown RBP1.35□□□□□ -2.19
PMS1-216ENST00000447734 ZDBF2Q9HCK1 2354 aa1.35□□□□□ -2.19
PMS1-216ENST00000447734 C7orf77A4D0Y5 90 aa1.35□□□□□ -2.19
PMS1-216ENST00000447734 PRR15LQ9BU68 103 aa1.35□□□□□ -2.19
PMS1-216ENST00000447734 NRXN1Q9ULB1 1477 aa1.35□□□□□ -2.19
PMS1-216ENST00000447734 PDCD11Q14690 1871 aaKnown RBP1.35□□□□□ -2.19
PMS1-216ENST00000447734 KNTC1P50748 2209 aa1.34□□□□□ -2.19
PMS1-216ENST00000447734 H3BQF6 201 aa1.34□□□□□ -2.19
PMS1-216ENST00000447734 ARL14EPLP0DKL9 152 aa1.34□□□□□ -2.19
PMS1-216ENST00000447734 ETDBQ3ZM63 59 aa1.34□□□□□ -2.19
PMS1-216ENST00000447734 SPRR4Q96PI1 79 aa1.34□□□□□ -2.19
PMS1-216ENST00000447734 RGPD3A6NKT7 1758 aaPredicted RBP1.34□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms