RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 C11orf21Q9P2W6 132 aa9.66□□□□□ -0.86
DDX56-206ENST00000446987 LENEPQ9Y5L5 61 aa9.66□□□□□ -0.86
DDX56-206ENST00000446987 ADARB2-AS1A8MUL3 147 aa9.66□□□□□ -0.86
DDX56-206ENST00000446987 ATP6V0E1O15342 81 aa9.66□□□□□ -0.86
DDX56-206ENST00000446987 CD28P10747 220 aa9.66□□□□□ -0.86
DDX56-206ENST00000446987 C11orf44Q8N8P7 122 aa9.66□□□□□ -0.86
DDX56-206ENST00000446987 SMAD5-AS1Q9Y6J3 95 aa9.66□□□□□ -0.86
DDX56-206ENST00000446987 IGHV4OR15-8A0A075B7B6 117 aa9.65□□□□□ -0.86
DDX56-206ENST00000446987 A0A087WW49 117 aa9.65□□□□□ -0.86
DDX56-206ENST00000446987 IGF1P05019 195 aa9.65□□□□□ -0.86
DDX56-206ENST00000446987 MALP21145 153 aa9.65□□□□□ -0.86
DDX56-206ENST00000446987 SMCR5Q8TEV8 140 aa9.65□□□□□ -0.86
DDX56-206ENST00000446987 PRO0628Q9UI54 55 aa9.65□□□□□ -0.86
DDX56-206ENST00000446987 ZNF580Q9UK33 172 aa9.65□□□□□ -0.86
DDX56-206ENST00000446987 PKD1L1Q8TDX9 2849 aa9.65□□□□□ -0.86
DDX56-206ENST00000446987 RPL18AQ02543 176 aaKnown RBP9.64□□□□□ -0.87
DDX56-206ENST00000446987 SERP2Q8N6R1 65 aa9.64□□□□□ -0.87
DDX56-206ENST00000446987 UPK3BQ9BT76 320 aa9.64□□□□□ -0.87
DDX56-206ENST00000446987 hADV29S1A0JD25 119 aa9.64□□□□□ -0.87
DDX56-206ENST00000446987 G3V318 75 aa9.64□□□□□ -0.87
DDX56-206ENST00000446987 C9orf47Q6ZRZ4 202 aa9.64□□□□□ -0.87
DDX56-206ENST00000446987 TIMM21Q9BVV7 248 aa9.64□□□□□ -0.87
DDX56-206ENST00000446987 TP53TG1Q9Y2A0 90 aa9.64□□□□□ -0.87
DDX56-206ENST00000446987 WNK1Q9H4A3 2382 aa9.63□□□□□ -0.87
DDX56-206ENST00000446987 A0A0J9YXY3 114 aa9.63□□□□□ -0.87
DDX56-206ENST00000446987 ZFAND3Q9H8U3 227 aa9.63□□□□□ -0.87
DDX56-206ENST00000446987 INAFM2P0DMQ5 153 aa9.62□□□□□ -0.87
DDX56-206ENST00000446987 FAM222AQ5U5X8 452 aa9.62□□□□□ -0.87
DDX56-206ENST00000446987 GPHB5Q86YW7 130 aa9.62□□□□□ -0.87
DDX56-206ENST00000446987 LITAFQ99732 161 aa9.62□□□□□ -0.87
DDX56-206ENST00000446987 APELAP0DMC3 54 aa9.62□□□□□ -0.87
DDX56-206ENST00000446987 POLR2KP53803 58 aaKnown RBP9.62□□□□□ -0.87
DDX56-206ENST00000446987 RPL39LQ96EH5 51 aaKnown RBP9.62□□□□□ -0.87
DDX56-206ENST00000446987 TRBV7-1A0A0A6YYK4 115 aa9.61□□□□□ -0.87
DDX56-206ENST00000446987 I3L3M4 83 aa9.61□□□□□ -0.87
DDX56-206ENST00000446987 VCYO14598 125 aa9.61□□□□□ -0.87
DDX56-206ENST00000446987 TIMM17BO60830 172 aa9.61□□□□□ -0.87
DDX56-206ENST00000446987 PRB4P10163 310 aaPredicted RBP9.61□□□□□ -0.87
DDX56-206ENST00000446987 C4orf26Q17RF5 130 aa9.61□□□□□ -0.87
DDX56-206ENST00000446987 RNF152Q8N8N0 203 aa9.61□□□□□ -0.87
DDX56-206ENST00000446987 IGLV11-55A0A075B6I3 123 aa9.6□□□□□ -0.87
DDX56-206ENST00000446987 TRAV13-1A0A0B4J241 112 aa9.6□□□□□ -0.87
DDX56-206ENST00000446987 F8W735 103 aaPredicted RBP9.6□□□□□ -0.87
DDX56-206ENST00000446987 PSMB8P28062 276 aa9.6□□□□□ -0.87
DDX56-206ENST00000446987 MIAQ16674 131 aa9.6□□□□□ -0.87
DDX56-206ENST00000446987 HRCT1Q6UXD1 115 aa9.6□□□□□ -0.87
DDX56-206ENST00000446987 C18orf65Q6ZTR6 163 aa9.6□□□□□ -0.87
DDX56-206ENST00000446987 JPT2Q9H910 190 aa9.6□□□□□ -0.87
DDX56-206ENST00000446987 TRAV41A0A0B4J266 112 aa9.59□□□□□ -0.87
DDX56-206ENST00000446987 NXPH4O95158 308 aa9.59□□□□□ -0.87
DDX56-206ENST00000446987 IGLV1-40P01703 118 aa9.59□□□□□ -0.87
DDX56-206ENST00000446987 ECSCRQ19T08 205 aa9.59□□□□□ -0.87
DDX56-206ENST00000446987 PYGO1Q9Y3Y4 419 aa9.59□□□□□ -0.87
DDX56-206ENST00000446987 PRAC2D3DTV9 90 aa9.59□□□□□ -0.87
DDX56-206ENST00000446987 OXTP01178 125 aa9.59□□□□□ -0.87
DDX56-206ENST00000446987 TMEM61Q8N0U2 210 aa9.59□□□□□ -0.87
DDX56-206ENST00000446987 TRBV6-5A0A0K0K1A5 114 aa9.58□□□□□ -0.88
DDX56-206ENST00000446987 EPM2AB3EWF7 344 aa9.58□□□□□ -0.88
DDX56-206ENST00000446987 NDUFC2O95298 119 aa9.58□□□□□ -0.88
DDX56-206ENST00000446987 RHOHQ15669 191 aa9.58□□□□□ -0.88
DDX56-206ENST00000446987 CLEC2BQ92478 149 aa9.58□□□□□ -0.88
DDX56-206ENST00000446987 TRBV27A0A0K0K1C4 114 aa9.57□□□□□ -0.88
DDX56-206ENST00000446987 NSUN5P1Q3KNT7 163 aa9.57□□□□□ -0.88
DDX56-206ENST00000446987 Q6JHZ5 121 aa9.57□□□□□ -0.88
DDX56-206ENST00000446987 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.57□□□□□ -0.88
DDX56-206ENST00000446987 FAM19A4Q96LR4 140 aa9.57□□□□□ -0.88
DDX56-206ENST00000446987 A0A1W2PRX2 142 aa9.57□□□□□ -0.88
DDX56-206ENST00000446987 ZNF415Q09FC8 603 aa9.57□□□□□ -0.88
DDX56-206ENST00000446987 FANCD2OSQ96PS1 177 aa9.57□□□□□ -0.88
DDX56-206ENST00000446987 TRAV8-3A0A0A6YYJ7 113 aa9.56□□□□□ -0.88
DDX56-206ENST00000446987 COX7A2LO14548 114 aa9.56□□□□□ -0.88
DDX56-206ENST00000446987 BUB3O43684 328 aa9.55□□□□□ -0.88
DDX56-206ENST00000446987 EEF1AKMT3Q96AZ1 226 aa9.55□□□□□ -0.88
DDX56-206ENST00000446987 MGAM2Q2M2H8 2515 aa9.55□□□□□ -0.88
DDX56-206ENST00000446987 TRAV21A0A0B4J279 112 aa9.55□□□□□ -0.88
DDX56-206ENST00000446987 MGPP08493 103 aa9.55□□□□□ -0.88
DDX56-206ENST00000446987 IGFL4Q6B9Z1 124 aa9.55□□□□□ -0.88
DDX56-206ENST00000446987 PHLDA3Q9Y5J5 127 aa9.55□□□□□ -0.88
DDX56-206ENST00000446987 KIF25-AS1Q9Y6Z4 181 aa9.55□□□□□ -0.88
DDX56-206ENST00000446987 FAM110DQ8TAY7 271 aaPredicted RBP9.54□□□□□ -0.88
DDX56-206ENST00000446987 DSCR8Q96T75 97 aa9.54□□□□□ -0.88
DDX56-206ENST00000446987 CYSTM1Q9H1C7 97 aa9.54□□□□□ -0.88
DDX56-206ENST00000446987 DNAH3Q8TD57 4116 aa9.53□□□□□ -0.88
DDX56-206ENST00000446987 CTSGP08311 255 aa9.53□□□□□ -0.88
DDX56-206ENST00000446987 LINC00315P59091 139 aa9.53□□□□□ -0.88
DDX56-206ENST00000446987 KHDC1LQ5JSQ8 128 aa9.53□□□□□ -0.88
DDX56-206ENST00000446987 RNF182Q8N6D2 247 aa9.53□□□□□ -0.88
DDX56-206ENST00000446987 NBEAL1Q6ZS30 2694 aa9.53□□□□□ -0.88
DDX56-206ENST00000446987 IGHV3-30-3P0DP02 117 aa9.53□□□□□ -0.88
DDX56-206ENST00000446987 DAZ2Q13117 558 aaKnown RBP9.53□□□□□ -0.88
DDX56-206ENST00000446987 KLK9Q2XQG4 91 aa9.53□□□□□ -0.88
DDX56-206ENST00000446987 DEFB136Q30KP8 78 aa9.53□□□□□ -0.88
DDX56-206ENST00000446987 BEAN1Q3B7T3 259 aa9.53□□□□□ -0.88
DDX56-206ENST00000446987 DAZ4Q86SG3 579 aaKnown RBP9.53□□□□□ -0.88
DDX56-206ENST00000446987 LINC00477Q96M19 166 aa9.53□□□□□ -0.88
DDX56-206ENST00000446987 DAZ1Q9NQZ3 744 aaKnown RBP9.53□□□□□ -0.88
DDX56-206ENST00000446987 DAZ3Q9NR90 486 aaKnown RBP9.53□□□□□ -0.88
DDX56-206ENST00000446987 KLK9Q9UKQ9 250 aa9.53□□□□□ -0.88
DDX56-206ENST00000446987 SPRY2O43597 315 aa9.52□□□□□ -0.89
DDX56-206ENST00000446987 S100A4P26447 101 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms