RNA–Protein interactions for RNA: ENST00000445275.6

TOM1L1-202, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-202ENST00000445275 CMYA5Q8N3K9 4069 aa13.7□□□□□ -0.22
TOM1L1-202ENST00000445275 MRPS36P82909 103 aaKnown RBP13.7□□□□□ -0.22
TOM1L1-202ENST00000445275 RNF183Q96D59 192 aa13.7□□□□□ -0.22
TOM1L1-202ENST00000445275 GTSF1LQ9H1H1 148 aa13.7□□□□□ -0.22
TOM1L1-202ENST00000445275 EGFEM1PQ0D2K5 195 aa13.69□□□□□ -0.22
TOM1L1-202ENST00000445275 TMEM223A0PJW6 202 aa13.68□□□□□ -0.22
TOM1L1-202ENST00000445275 TSPEAR-AS2P59090 65 aa13.68□□□□□ -0.22
TOM1L1-202ENST00000445275 ORAOV1Q8WV07 137 aa13.67□□□□□ -0.22
TOM1L1-202ENST00000445275 MIFP14174 115 aa13.67□□□□□ -0.22
TOM1L1-202ENST00000445275 ZNF815PA8K554 130 aa13.66□□□□□ -0.22
TOM1L1-202ENST00000445275 DGAT2L7PQ6IED9 249 aa13.66□□□□□ -0.22
TOM1L1-202ENST00000445275 CELA1Q9UNI1 258 aa13.66□□□□□ -0.22
TOM1L1-202ENST00000445275 TMEM243Q9BU79 118 aa13.66□□□□□ -0.22
TOM1L1-202ENST00000445275 TAX1BP3O14907 124 aa13.65□□□□□ -0.22
TOM1L1-202ENST00000445275 UBE2D1P51668 147 aa13.65□□□□□ -0.22
TOM1L1-202ENST00000445275 SEC11AP67812 179 aa13.65□□□□□ -0.22
TOM1L1-202ENST00000445275 PLEKHB2Q96CS7 222 aa13.64□□□□□ -0.23
TOM1L1-202ENST00000445275 CSDC2Q9Y534 153 aaKnown RBP13.64□□□□□ -0.23
TOM1L1-202ENST00000445275 TINCRA0A1B0GVN0 87 aa13.64□□□□□ -0.23
TOM1L1-202ENST00000445275 GYPEP15421 78 aa13.64□□□□□ -0.23
TOM1L1-202ENST00000445275 IGHV3-64A0A075B6Q5 118 aa13.63□□□□□ -0.23
TOM1L1-202ENST00000445275 K7EP13 123 aa13.63□□□□□ -0.23
TOM1L1-202ENST00000445275 LEPROTO15243 131 aa13.63□□□□□ -0.23
TOM1L1-202ENST00000445275 PRO0255Q9UI72 69 aa13.63□□□□□ -0.23
TOM1L1-202ENST00000445275 PKD1L1Q8TDX9 2849 aa13.62□□□□□ -0.23
TOM1L1-202ENST00000445275 J3QQQ9 107 aa13.62□□□□□ -0.23
TOM1L1-202ENST00000445275 GCSHP23434 173 aa13.62□□□□□ -0.23
TOM1L1-202ENST00000445275 COX11Q9Y6N1 276 aa13.62□□□□□ -0.23
TOM1L1-202ENST00000445275 TRBV6-8A0A0A6YYG3 113 aa13.62□□□□□ -0.23
TOM1L1-202ENST00000445275 G3V4G9 280 aa13.62□□□□□ -0.23
TOM1L1-202ENST00000445275 FXYD2P54710 66 aa13.62□□□□□ -0.23
TOM1L1-202ENST00000445275 DAD1P61803 113 aa13.62□□□□□ -0.23
TOM1L1-202ENST00000445275 CDC42SE2Q9NRR3 84 aa13.62□□□□□ -0.23
TOM1L1-202ENST00000445275 A8MZ25 164 aa13.61□□□□□ -0.23
TOM1L1-202ENST00000445275 UBE2L6O14933 153 aa13.6□□□□□ -0.23
TOM1L1-202ENST00000445275 CEND1Q8N111 149 aa13.6□□□□□ -0.23
TOM1L1-202ENST00000445275 OR5A1Q8NGJ0 315 aa13.6□□□□□ -0.23
TOM1L1-202ENST00000445275 TM2D2Q9BX73 214 aa13.6□□□□□ -0.23
TOM1L1-202ENST00000445275 H7C423 109 aa13.59□□□□□ -0.23
TOM1L1-202ENST00000445275 GAGE6Q13070 117 aa13.59□□□□□ -0.23
TOM1L1-202ENST00000445275 TAL2Q16559 108 aa13.59□□□□□ -0.23
TOM1L1-202ENST00000445275 AMMECR1LQ6DCA0 310 aa13.59□□□□□ -0.23
TOM1L1-202ENST00000445275 ATP6V0E2Q8NHE4 81 aa13.59□□□□□ -0.23
TOM1L1-202ENST00000445275 VSIG2Q96IQ7 327 aa13.59□□□□□ -0.23
TOM1L1-202ENST00000445275 RETNQ9HD89 108 aa13.59□□□□□ -0.23
TOM1L1-202ENST00000445275 PAX4O43316 350 aa13.59□□□□□ -0.23
TOM1L1-202ENST00000445275 LGALS3P17931 250 aaKnown RBP13.59□□□□□ -0.23
TOM1L1-202ENST00000445275 TIRAPP58753 221 aa13.59□□□□□ -0.23
TOM1L1-202ENST00000445275 COX6A2Q02221 97 aa13.59□□□□□ -0.23
TOM1L1-202ENST00000445275 TRAV8-3A0A0A6YYJ7 113 aa13.58□□□□□ -0.24
TOM1L1-202ENST00000445275 SCGB1D4Q6XE38 83 aa13.58□□□□□ -0.24
TOM1L1-202ENST00000445275 A6NDN8 102 aa13.58□□□□□ -0.24
TOM1L1-202ENST00000445275 SPART-AS1P0CW21 52 aa13.58□□□□□ -0.24
TOM1L1-202ENST00000445275 SMAGPQ0VAQ4 97 aa13.58□□□□□ -0.24
TOM1L1-202ENST00000445275 LINC00242Q5T6M2 205 aa13.58□□□□□ -0.24
TOM1L1-202ENST00000445275 HIST1H4GQ99525 98 aa13.58□□□□□ -0.24
TOM1L1-202ENST00000445275 GEMIN7Q9H840 131 aaKnown RBP13.58□□□□□ -0.24
TOM1L1-202ENST00000445275 IGLV5-45A0A087WSX0 123 aa13.57□□□□□ -0.24
TOM1L1-202ENST00000445275 A0A0J9YY99 117 aa13.57□□□□□ -0.24
TOM1L1-202ENST00000445275 IGHV3-30-3P0DP02 117 aa13.57□□□□□ -0.24
TOM1L1-202ENST00000445275 FAM19A3Q7Z5A8 133 aa13.57□□□□□ -0.24
TOM1L1-202ENST00000445275 COL6A5A8TX70 2615 aa13.57□□□□□ -0.24
TOM1L1-202ENST00000445275 SPINK8P0C7L1 97 aa13.56□□□□□ -0.24
TOM1L1-202ENST00000445275 TMEM101Q96IK0 257 aa13.56□□□□□ -0.24
TOM1L1-202ENST00000445275 CDKN2A-AS1Q9UH64 79 aa13.56□□□□□ -0.24
TOM1L1-202ENST00000445275 CHCHD5Q9BSY4 110 aa13.56□□□□□ -0.24
TOM1L1-202ENST00000445275 DNAH3Q8TD57 4116 aa13.56□□□□□ -0.24
TOM1L1-202ENST00000445275 A0A096LPF7 62 aa13.55□□□□□ -0.24
TOM1L1-202ENST00000445275 TRAV13-1A0A0B4J241 112 aa13.55□□□□□ -0.24
TOM1L1-202ENST00000445275 IGHV1-58A0A0C4DH39 117 aa13.55□□□□□ -0.24
TOM1L1-202ENST00000445275 ATP5G1P05496 136 aa13.55□□□□□ -0.24
TOM1L1-202ENST00000445275 H3BRM9 83 aa13.55□□□□□ -0.24
TOM1L1-202ENST00000445275 IGLV4-60A0A075B6I1 120 aa13.54□□□□□ -0.24
TOM1L1-202ENST00000445275 PTTG1IPP53801 180 aa13.54□□□□□ -0.24
TOM1L1-202ENST00000445275 SAMD5Q5TGI4 173 aa13.54□□□□□ -0.24
TOM1L1-202ENST00000445275 TRAV26-1A0A087WT03 109 aa13.52□□□□□ -0.24
TOM1L1-202ENST00000445275 F5H768 121 aa13.52□□□□□ -0.24
TOM1L1-202ENST00000445275 HERVK_113P63121 156 aa13.52□□□□□ -0.24
TOM1L1-202ENST00000445275 C10orf126Q8N4M7 172 aa13.52□□□□□ -0.25
TOM1L1-202ENST00000445275 K7ERJ3 54 aa13.51□□□□□ -0.25
TOM1L1-202ENST00000445275 RAB37Q96AX2 223 aa13.51□□□□□ -0.25
TOM1L1-202ENST00000445275 NHP2Q9NX24 153 aaKnown RBP13.51□□□□□ -0.25
TOM1L1-202ENST00000445275 SMIM13P0DJ93 91 aa13.51□□□□□ -0.25
TOM1L1-202ENST00000445275 HTN3P15516 51 aa13.51□□□□□ -0.25
TOM1L1-202ENST00000445275 C12orf74Q32Q52 190 aa13.5□□□□□ -0.25
TOM1L1-202ENST00000445275 SPANXB1Q9NS25 103 aaPredicted RBP13.49□□□□□ -0.25
TOM1L1-202ENST00000445275 ANK2Q01484 3957 aa13.49□□□□□ -0.25
TOM1L1-202ENST00000445275 C9orf118A6NHY6 69 aa13.49□□□□□ -0.25
TOM1L1-202ENST00000445275 CCL25O15444 150 aa13.49□□□□□ -0.25
TOM1L1-202ENST00000445275 SRSF9Q13242 221 aaKnown RBP eCLIP13.49□□□□□ -0.25
TOM1L1-202ENST00000445275 NAA38Q9BRA0 125 aaKnown RBP13.48□□□□□ -0.25
TOM1L1-202ENST00000445275 A0A0J9YXY3 114 aa13.48□□□□□ -0.25
TOM1L1-202ENST00000445275 IGLV5-39A0A0G2JS06 123 aa13.47□□□□□ -0.25
TOM1L1-202ENST00000445275 TEX48A0A1B0GUV7 120 aa13.47□□□□□ -0.25
TOM1L1-202ENST00000445275 VAMP3Q15836 100 aa13.47□□□□□ -0.25
TOM1L1-202ENST00000445275 NDUFA12Q9UI09 145 aa13.47□□□□□ -0.25
TOM1L1-202ENST00000445275 IGKV3OR2-268A0A0C4DH90 116 aa13.46□□□□□ -0.25
TOM1L1-202ENST00000445275 SMIM1B2RUZ4 78 aa13.46□□□□□ -0.25
TOM1L1-202ENST00000445275 IGHV3-30P01768 117 aa13.46□□□□□ -0.25
TOM1L1-202ENST00000445275 IGHV3-30-5P0DP03 117 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms