RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 MRPS36P82909 103 aaKnown RBP13.94□□□□□ -0.18
SHANK3-203ENST00000445220 PRO0255Q9UI72 69 aa13.94□□□□□ -0.18
SHANK3-203ENST00000445220 UBE2AP49459 152 aa13.93□□□□□ -0.18
SHANK3-203ENST00000445220 LINC00526Q96FQ7 95 aa13.93□□□□□ -0.18
SHANK3-203ENST00000445220 TNCP24821 2201 aa13.93□□□□□ -0.18
SHANK3-203ENST00000445220 TNFRSF13BO14836 293 aaPredicted RBP13.93□□□□□ -0.18
SHANK3-203ENST00000445220 Q6ZS46 218 aa13.93□□□□□ -0.18
SHANK3-203ENST00000445220 C4orf3Q8WVX3 66 aa13.92□□□□□ -0.18
SHANK3-203ENST00000445220 IGF1P05019 195 aa13.92□□□□□ -0.18
SHANK3-203ENST00000445220 ZNF462Q96JM2 2506 aa13.92□□□□□ -0.18
SHANK3-203ENST00000445220 LMO4P61968 165 aa13.91□□□□□ -0.18
SHANK3-203ENST00000445220 IGKV4-1P06312 121 aa13.91□□□□□ -0.18
SHANK3-203ENST00000445220 URB1-AS1Q96HZ7 61 aa13.9□□□□□ -0.18
SHANK3-203ENST00000445220 CSPG4Q6UVK1 2322 aa13.9□□□□□ -0.18
SHANK3-203ENST00000445220 C6orf99Q4VX62 202 aa13.89□□□□□ -0.19
SHANK3-203ENST00000445220 NRGNQ92686 78 aa13.89□□□□□ -0.19
SHANK3-203ENST00000445220 SPTBN4Q9H254 2564 aa13.88□□□□□ -0.19
SHANK3-203ENST00000445220 MAP6D1Q9H9H5 199 aa13.88□□□□□ -0.19
SHANK3-203ENST00000445220 SERP1Q9Y6X1 66 aa13.88□□□□□ -0.19
SHANK3-203ENST00000445220 NAV3Q8IVL0 2385 aa13.88□□□□□ -0.19
SHANK3-203ENST00000445220 CCL18P55774 89 aa13.88□□□□□ -0.19
SHANK3-203ENST00000445220 SMAD5-AS1Q9Y6J3 95 aa13.88□□□□□ -0.19
SHANK3-203ENST00000445220 Q6ZTI0 123 aa13.87□□□□□ -0.19
SHANK3-203ENST00000445220 CCKP06307 115 aa13.87□□□□□ -0.19
SHANK3-203ENST00000445220 PCDH15Q96QU1 1955 aa13.87□□□□□ -0.19
SHANK3-203ENST00000445220 ZFAND3Q9H8U3 227 aa13.87□□□□□ -0.19
SHANK3-203ENST00000445220 A8MZ25 164 aa13.86□□□□□ -0.19
SHANK3-203ENST00000445220 LYRM9A8MSI8 78 aa13.86□□□□□ -0.19
SHANK3-203ENST00000445220 K7EQG2 157 aa13.86□□□□□ -0.19
SHANK3-203ENST00000445220 LINC00269Q8N2A0 174 aa13.86□□□□□ -0.19
SHANK3-203ENST00000445220 PLXNB1O43157 2135 aa13.85□□□□□ -0.19
SHANK3-203ENST00000445220 REG3AQ06141 175 aa13.85□□□□□ -0.19
SHANK3-203ENST00000445220 A6NED7 52 aa13.85□□□□□ -0.19
SHANK3-203ENST00000445220 TSHBP01222 138 aa13.85□□□□□ -0.19
SHANK3-203ENST00000445220 UBE2D1P51668 147 aa13.85□□□□□ -0.19
SHANK3-203ENST00000445220 POLR2KP53803 58 aaKnown RBP13.84□□□□□ -0.19
SHANK3-203ENST00000445220 CHCHD10Q8WYQ3 142 aaPredicted RBP13.84□□□□□ -0.19
SHANK3-203ENST00000445220 UBE2D3P61077 147 aa13.83□□□□□ -0.19
SHANK3-203ENST00000445220 UBE2D2P62837 147 aa13.83□□□□□ -0.19
SHANK3-203ENST00000445220 EBI3Q14213 229 aa13.83□□□□□ -0.19
SHANK3-203ENST00000445220 CNFNQ9BYD5 112 aa13.83□□□□□ -0.19
SHANK3-203ENST00000445220 FAM19A5Q7Z5A7 132 aaPredicted RBP13.83□□□□□ -0.2
SHANK3-203ENST00000445220 C10orf142B7Z368 130 aa13.83□□□□□ -0.2
SHANK3-203ENST00000445220 GAS8-AS1O95177 125 aa13.82□□□□□ -0.2
SHANK3-203ENST00000445220 TRAV7A0A075B6U4 112 aa13.82□□□□□ -0.2
SHANK3-203ENST00000445220 LINC01548A6NM66 108 aa13.82□□□□□ -0.2
SHANK3-203ENST00000445220 MIFP14174 115 aa13.82□□□□□ -0.2
SHANK3-203ENST00000445220 SMIM11BQ8TCY0 68 aa13.82□□□□□ -0.2
SHANK3-203ENST00000445220 C11orf21Q9P2W6 132 aa13.81□□□□□ -0.2
SHANK3-203ENST00000445220 WNK1Q9H4A3 2382 aa13.81□□□□□ -0.2
SHANK3-203ENST00000445220 NAV2Q8IVL1 2488 aa13.81□□□□□ -0.2
SHANK3-203ENST00000445220 RNASE3P12724 160 aaKnown RBP13.8□□□□□ -0.2
SHANK3-203ENST00000445220 Q6ZQY7 126 aa13.8□□□□□ -0.2
SHANK3-203ENST00000445220 C22orf34Q6ZV56 151 aa13.79□□□□□ -0.2
SHANK3-203ENST00000445220 MED12LQ86YW9 2145 aa13.79□□□□□ -0.2
SHANK3-203ENST00000445220 MUC22E2RYF6 1773 aaPredicted RBP13.79□□□□□ -0.2
SHANK3-203ENST00000445220 DEFB135Q30KP9 77 aa13.79□□□□□ -0.2
SHANK3-203ENST00000445220 ALPK3Q96L96 1907 aa13.79□□□□□ -0.2
SHANK3-203ENST00000445220 PRR15LQ9BU68 103 aa13.78□□□□□ -0.2
SHANK3-203ENST00000445220 LY6LH3BQJ8 138 aa13.78□□□□□ -0.2
SHANK3-203ENST00000445220 WFDC10BQ8IUB3 73 aa13.78□□□□□ -0.2
SHANK3-203ENST00000445220 C1orf158Q8N1D5 194 aa13.78□□□□□ -0.2
SHANK3-203ENST00000445220 B9D2Q9BPU9 175 aa13.78□□□□□ -0.2
SHANK3-203ENST00000445220 C3orf84H3BNL1 204 aa13.78□□□□□ -0.2
SHANK3-203ENST00000445220 CRIP2P52943 208 aaPredicted RBP13.78□□□□□ -0.2
SHANK3-203ENST00000445220 HIGD2AQ9BW72 106 aa13.77□□□□□ -0.2
SHANK3-203ENST00000445220 DEFB4AO15263 64 aa13.77□□□□□ -0.2
SHANK3-203ENST00000445220 TRBV6-8A0A0A6YYG3 113 aa13.77□□□□□ -0.21
SHANK3-203ENST00000445220 POM121L12Q8N7R1 296 aa13.77□□□□□ -0.21
SHANK3-203ENST00000445220 IGIPA6NJ69 53 aa13.77□□□□□ -0.21
SHANK3-203ENST00000445220 UBE2D4Q9Y2X8 147 aa13.77□□□□□ -0.21
SHANK3-203ENST00000445220 PCNX3Q9H6A9 2034 aa13.76□□□□□ -0.21
SHANK3-203ENST00000445220 PROK1P58294 105 aa13.76□□□□□ -0.21
SHANK3-203ENST00000445220 DNAJC9-AS1A6NH13 148 aa13.76□□□□□ -0.21
SHANK3-203ENST00000445220 F8W735 103 aaPredicted RBP13.76□□□□□ -0.21
SHANK3-203ENST00000445220 PRR4Q16378 134 aa13.75□□□□□ -0.21
SHANK3-203ENST00000445220 C19orf84I3L1E1 186 aa13.75□□□□□ -0.21
SHANK3-203ENST00000445220 CASC2Q6XLA1 102 aa13.75□□□□□ -0.21
SHANK3-203ENST00000445220 Q6YL49 198 aa13.75□□□□□ -0.21
SHANK3-203ENST00000445220 NUP210LQ5VU65 1888 aa13.74□□□□□ -0.21
SHANK3-203ENST00000445220 XAGE1AQ9HD64 81 aa13.74□□□□□ -0.21
SHANK3-203ENST00000445220 CSDC2Q9Y534 153 aaKnown RBP13.74□□□□□ -0.21
SHANK3-203ENST00000445220 C11orf71Q6IPW1 123 aa13.74□□□□□ -0.21
SHANK3-203ENST00000445220 TRBV6-4A0A1B0GX49 114 aa13.74□□□□□ -0.21
SHANK3-203ENST00000445220 PRR9Q5T870 116 aa13.74□□□□□ -0.21
SHANK3-203ENST00000445220 A0A087WVE0 104 aa13.73□□□□□ -0.21
SHANK3-203ENST00000445220 K7ERS5 55 aa13.72□□□□□ -0.21
SHANK3-203ENST00000445220 DCANP1Q8TF63 244 aa13.72□□□□□ -0.21
SHANK3-203ENST00000445220 CRYGDP07320 174 aa13.72□□□□□ -0.21
SHANK3-203ENST00000445220 PMAIP1Q13794 54 aa13.71□□□□□ -0.21
SHANK3-203ENST00000445220 KLLNB2CW77 178 aa13.71□□□□□ -0.22
SHANK3-203ENST00000445220 IGHV4-31P0DP07 118 aa13.71□□□□□ -0.22
SHANK3-203ENST00000445220 CEP295Q9C0D2 2601 aa13.7□□□□□ -0.22
SHANK3-203ENST00000445220 SOSTDC1Q6X4U4 206 aa13.7□□□□□ -0.22
SHANK3-203ENST00000445220 NTM-AS1Q6ZSK4 140 aa13.7□□□□□ -0.22
SHANK3-203ENST00000445220 C9orf85Q96MD7 179 aa13.7□□□□□ -0.22
SHANK3-203ENST00000445220 KLK5Q9Y337 293 aaPredicted RBP13.69□□□□□ -0.22
SHANK3-203ENST00000445220 WFDC13Q8IUB5 93 aa13.69□□□□□ -0.22
SHANK3-203ENST00000445220 CDIP1Q9H305 208 aa13.69□□□□□ -0.22
SHANK3-203ENST00000445220 PRR14LQ5THK1 2151 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms