RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 TIMM17AQ99595 171 aa10.24□□□□□ -0.77
CCNE1-203ENST00000444983 CDC42SE2Q9NRR3 84 aa10.24□□□□□ -0.77
CCNE1-203ENST00000444983 VPS13DQ5THJ4 4388 aa10.23□□□□□ -0.77
CCNE1-203ENST00000444983 MRPS36P82909 103 aaKnown RBP10.23□□□□□ -0.77
CCNE1-203ENST00000444983 K7EP13 123 aa10.22□□□□□ -0.77
CCNE1-203ENST00000444983 SNRPEP62304 92 aaKnown RBP10.22□□□□□ -0.77
CCNE1-203ENST00000444983 SMAGPQ0VAQ4 97 aa10.22□□□□□ -0.77
CCNE1-203ENST00000444983 AMMECR1LQ6DCA0 310 aa10.22□□□□□ -0.77
CCNE1-203ENST00000444983 OPRPNQ99935 248 aaPredicted RBP10.22□□□□□ -0.77
CCNE1-203ENST00000444983 IGLV4-3A0A075B6K6 122 aa10.22□□□□□ -0.77
CCNE1-203ENST00000444983 IGHV3-30P01768 117 aa10.22□□□□□ -0.77
CCNE1-203ENST00000444983 IGHV3-33P01772 117 aa10.22□□□□□ -0.77
CCNE1-203ENST00000444983 IGHV3-30-3P0DP02 117 aa10.22□□□□□ -0.77
CCNE1-203ENST00000444983 IGHV3-30-5P0DP03 117 aa10.22□□□□□ -0.77
CCNE1-203ENST00000444983 HIST3H2BBQ8N257 126 aa10.22□□□□□ -0.77
CCNE1-203ENST00000444983 ZNF664Q8N3J9 261 aa10.22□□□□□ -0.77
CCNE1-203ENST00000444983 PACRGQ96M98 296 aaPredicted RBP10.22□□□□□ -0.77
CCNE1-203ENST00000444983 SCGB3A1Q96QR1 104 aa10.22□□□□□ -0.77
CCNE1-203ENST00000444983 OR5A1Q8NGJ0 315 aa10.21□□□□□ -0.78
CCNE1-203ENST00000444983 TMEM141Q96I45 108 aa10.21□□□□□ -0.78
CCNE1-203ENST00000444983 KRTAP1-5Q9BYS1 174 aa10.21□□□□□ -0.78
CCNE1-203ENST00000444983 PRR34Q9NV39 138 aa10.21□□□□□ -0.78
CCNE1-203ENST00000444983 LY6G6CO95867 125 aa10.2□□□□□ -0.78
CCNE1-203ENST00000444983 DGAT2L7PQ6IED9 249 aa10.2□□□□□ -0.78
CCNE1-203ENST00000444983 Q6ZUT4 128 aa10.2□□□□□ -0.78
CCNE1-203ENST00000444983 LINC00173Q6ZV60 143 aa10.2□□□□□ -0.78
CCNE1-203ENST00000444983 TMEM101Q96IK0 257 aa10.2□□□□□ -0.78
CCNE1-203ENST00000444983 KMT2AQ03164 3969 aa10.19□□□□□ -0.78
CCNE1-203ENST00000444983 IFITM10A6NMD0 228 aa10.19□□□□□ -0.78
CCNE1-203ENST00000444983 LEPROTL1O95214 131 aa10.19□□□□□ -0.78
CCNE1-203ENST00000444983 AMELXQ99217 191 aa10.19□□□□□ -0.78
CCNE1-203ENST00000444983 KLK12Q9UKR0 248 aa10.19□□□□□ -0.78
CCNE1-203ENST00000444983 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.18□□□□□ -0.78
CCNE1-203ENST00000444983 ATP5LO75964 103 aa10.18□□□□□ -0.78
CCNE1-203ENST00000444983 ANGP03950 147 aaKnown RBP10.18□□□□□ -0.78
CCNE1-203ENST00000444983 ALMS1Q8TCU4 4167 aa10.18□□□□□ -0.78
CCNE1-203ENST00000444983 NBDYA0A0U1RRE5 68 aa10.18□□□□□ -0.78
CCNE1-203ENST00000444983 IBA57-AS1B1ANH7 110 aa10.18□□□□□ -0.78
CCNE1-203ENST00000444983 ENHOQ6UWT2 76 aa10.18□□□□□ -0.78
CCNE1-203ENST00000444983 LINC00269Q8N2A0 174 aa10.18□□□□□ -0.78
CCNE1-203ENST00000444983 TRAV9-2A0A087WT02 112 aa10.17□□□□□ -0.78
CCNE1-203ENST00000444983 FABP4P15090 132 aa10.17□□□□□ -0.78
CCNE1-203ENST00000444983 REG3AQ06141 175 aa10.17□□□□□ -0.78
CCNE1-203ENST00000444983 RNASE13Q5GAN3 156 aaKnown RBP10.17□□□□□ -0.78
CCNE1-203ENST00000444983 Q6ZR54 194 aa10.17□□□□□ -0.78
CCNE1-203ENST00000444983 C10orf126Q8N4M7 172 aa10.17□□□□□ -0.78
CCNE1-203ENST00000444983 BAALCQ8WXS3 180 aa10.17□□□□□ -0.78
CCNE1-203ENST00000444983 IFI27L1Q96BM0 104 aa10.17□□□□□ -0.78
CCNE1-203ENST00000444983 HIST1H2BLQ99880 126 aa10.17□□□□□ -0.78
CCNE1-203ENST00000444983 HSPB8Q9UJY1 196 aa10.16□□□□□ -0.78
CCNE1-203ENST00000444983 LCE6AA0A183 80 aa10.15□□□□□ -0.78
CCNE1-203ENST00000444983 PAPPA-AS1Q5QFB9 102 aa10.15□□□□□ -0.78
CCNE1-203ENST00000444983 ZC2HC1BQ5TFG8 222 aa10.15□□□□□ -0.78
CCNE1-203ENST00000444983 VCX2Q9H322 139 aa10.15□□□□□ -0.78
CCNE1-203ENST00000444983 TEX43Q6ZNM6 134 aa10.15□□□□□ -0.79
CCNE1-203ENST00000444983 CST9LQ9H4G1 147 aa10.15□□□□□ -0.79
CCNE1-203ENST00000444983 PMVKQ15126 192 aa10.14□□□□□ -0.79
CCNE1-203ENST00000444983 LBHQ53QV2 105 aaPredicted RBP10.14□□□□□ -0.79
CCNE1-203ENST00000444983 TTC32Q5I0X7 151 aa10.14□□□□□ -0.79
CCNE1-203ENST00000444983 Q6ZN92 141 aa10.14□□□□□ -0.79
CCNE1-203ENST00000444983 LINC00959A0A1B0GUT2 108 aa10.13□□□□□ -0.79
CCNE1-203ENST00000444983 S100A2P29034 98 aa10.13□□□□□ -0.79
CCNE1-203ENST00000444983 MIAQ16674 131 aa10.13□□□□□ -0.79
CCNE1-203ENST00000444983 CLPSL2Q6UWE3 100 aa10.13□□□□□ -0.79
CCNE1-203ENST00000444983 FAM19A3Q7Z5A8 133 aa10.13□□□□□ -0.79
CCNE1-203ENST00000444983 UBE2WQ96B02 151 aa10.13□□□□□ -0.79
CCNE1-203ENST00000444983 TRAV12-1A0A0B4J245 112 aa10.12□□□□□ -0.79
CCNE1-203ENST00000444983 PRSS29PA6NIE9 313 aa10.12□□□□□ -0.79
CCNE1-203ENST00000444983 SPATA12Q7Z6I5 190 aa10.12□□□□□ -0.79
CCNE1-203ENST00000444983 TRAV8-3A0A0A6YYJ7 113 aa10.12□□□□□ -0.79
CCNE1-203ENST00000444983 CCL25O15444 150 aa10.12□□□□□ -0.79
CCNE1-203ENST00000444983 UBE2D1P51668 147 aa10.12□□□□□ -0.79
CCNE1-203ENST00000444983 TRAV8-4A0A0B4J246 113 aa10.11□□□□□ -0.79
CCNE1-203ENST00000444983 CRPP02741 224 aa10.11□□□□□ -0.79
CCNE1-203ENST00000444983 PRSS1P07477 247 aa10.11□□□□□ -0.79
CCNE1-203ENST00000444983 KRTAP26-1Q6PEX3 210 aa10.11□□□□□ -0.79
CCNE1-203ENST00000444983 TRAV13-1A0A0B4J241 112 aa10.1□□□□□ -0.79
CCNE1-203ENST00000444983 SYS1-DBNDD2H3BUS1 97 aa10.1□□□□□ -0.79
CCNE1-203ENST00000444983 M0R2N4 97 aa10.1□□□□□ -0.79
CCNE1-203ENST00000444983 C3orf79P0CE67 100 aa10.1□□□□□ -0.79
CCNE1-203ENST00000444983 LINC00242Q5T6M2 205 aa10.1□□□□□ -0.79
CCNE1-203ENST00000444983 C2orf88Q9BSF0 95 aa10.1□□□□□ -0.79
CCNE1-203ENST00000444983 MAP1LC3CQ9BXW4 147 aa10.1□□□□□ -0.79
CCNE1-203ENST00000444983 DNAH6Q9C0G6 4158 aa10.1□□□□□ -0.79
CCNE1-203ENST00000444983 IGKV3OR2-268A0A0C4DH90 116 aa10.09□□□□□ -0.79
CCNE1-203ENST00000444983 ODF1Q14990 250 aa10.09□□□□□ -0.79
CCNE1-203ENST00000444983 KMT2CQ8NEZ4 4911 aaKnown RBP10.09□□□□□ -0.79
CCNE1-203ENST00000444983 IGLV4-69A0A075B6H9 119 aa10.08□□□□□ -0.8
CCNE1-203ENST00000444983 IGLV10-54A0A075B6I4 117 aa10.08□□□□□ -0.8
CCNE1-203ENST00000444983 SS18Q15532 418 aa10.08□□□□□ -0.8
CCNE1-203ENST00000444983 Q6ZRN7 208 aaPredicted RBP10.08□□□□□ -0.8
CCNE1-203ENST00000444983 CHCHD10Q8WYQ3 142 aaPredicted RBP10.08□□□□□ -0.8
CCNE1-203ENST00000444983 Q9HAA7 133 aa10.08□□□□□ -0.8
CCNE1-203ENST00000444983 A0A0J9YXV3 536 aa10.07□□□□□ -0.8
CCNE1-203ENST00000444983 COX6A2Q02221 97 aa10.07□□□□□ -0.8
CCNE1-203ENST00000444983 IGHV3OR16-9A0A0B4J2B5 98 aa10.06□□□□□ -0.8
CCNE1-203ENST00000444983 F8VRH5 84 aa10.06□□□□□ -0.8
CCNE1-203ENST00000444983 IGLC3P0DOY3 106 aa10.06□□□□□ -0.8
CCNE1-203ENST00000444983 LINC01545Q5VT33 79 aa10.06□□□□□ -0.8
CCNE1-203ENST00000444983 PET117Q6UWS5 81 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms