RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 SMIM9A6NGZ8 99 aa7.23□□□□□ -1.25
CASP4-203ENST00000444739 SMIM1B2RUZ4 78 aa7.23□□□□□ -1.25
CASP4-203ENST00000444739 IGHV4-38-2P0DP08 117 aa7.23□□□□□ -1.25
CASP4-203ENST00000444739 RPS28P62857 69 aaKnown RBP7.23□□□□□ -1.25
CASP4-203ENST00000444739 LINC00242Q5T6M2 205 aa7.23□□□□□ -1.25
CASP4-203ENST00000444739 CYSTM1Q9H1C7 97 aa7.23□□□□□ -1.25
CASP4-203ENST00000444739 NBASA2RRP1 2371 aa7.22□□□□□ -1.25
CASP4-203ENST00000444739 PRM2P04554 102 aa7.22□□□□□ -1.25
CASP4-203ENST00000444739 MALP21145 153 aa7.22□□□□□ -1.25
CASP4-203ENST00000444739 PIK3CD-AS1Q5SR53 167 aa7.22□□□□□ -1.25
CASP4-203ENST00000444739 hADV29S1A0JD25 119 aa7.22□□□□□ -1.25
CASP4-203ENST00000444739 K7ENP7 123 aa7.22□□□□□ -1.25
CASP4-203ENST00000444739 FAM19A3Q7Z5A8 133 aa7.22□□□□□ -1.25
CASP4-203ENST00000444739 Q9HAA7 133 aa7.22□□□□□ -1.25
CASP4-203ENST00000444739 TTC28Q96AY4 2481 aa7.21□□□□□ -1.25
CASP4-203ENST00000444739 SPTA1P02549 2419 aa7.21□□□□□ -1.25
CASP4-203ENST00000444739 IGHV3-53P01767 116 aa7.21□□□□□ -1.26
CASP4-203ENST00000444739 PSMB8P28062 276 aa7.21□□□□□ -1.26
CASP4-203ENST00000444739 ATP5J2P56134 94 aa7.21□□□□□ -1.26
CASP4-203ENST00000444739 PRIMA1Q86XR5 153 aa7.21□□□□□ -1.26
CASP4-203ENST00000444739 RIF1Q5UIP0 2472 aaKnown RBP7.21□□□□□ -1.26
CASP4-203ENST00000444739 AKAP6Q13023 2319 aa7.21□□□□□ -1.26
CASP4-203ENST00000444739 PTPRQQ9UMZ3 2332 aa7.21□□□□□ -1.26
CASP4-203ENST00000444739 RPL28P46779 137 aaKnown RBP7.2□□□□□ -1.26
CASP4-203ENST00000444739 RPL18AQ02543 176 aaKnown RBP7.2□□□□□ -1.26
CASP4-203ENST00000444739 ZNF415Q09FC8 603 aa7.2□□□□□ -1.26
CASP4-203ENST00000444739 HIST2H2BCQ6DN03 193 aa7.2□□□□□ -1.26
CASP4-203ENST00000444739 HIST2H2BDQ6DRA6 164 aa7.2□□□□□ -1.26
CASP4-203ENST00000444739 DGAT2L7PQ6IED9 249 aa7.2□□□□□ -1.26
CASP4-203ENST00000444739 HOXD3P31249 432 aaPredicted RBP7.19□□□□□ -1.26
CASP4-203ENST00000444739 C9orf129Q5T035 196 aaKnown RBP7.19□□□□□ -1.26
CASP4-203ENST00000444739 COL12A1Q99715 3063 aa7.19□□□□□ -1.26
CASP4-203ENST00000444739 TRAV13-1A0A0B4J241 112 aa7.19□□□□□ -1.26
CASP4-203ENST00000444739 A8MTW9 85 aa7.19□□□□□ -1.26
CASP4-203ENST00000444739 F5H768 121 aa7.19□□□□□ -1.26
CASP4-203ENST00000444739 PF4P02776 101 aa7.19□□□□□ -1.26
CASP4-203ENST00000444739 C10orf99Q6UWK7 81 aa7.19□□□□□ -1.26
CASP4-203ENST00000444739 PIMREGQ9BSJ6 248 aa7.19□□□□□ -1.26
CASP4-203ENST00000444739 UPK3BQ9BT76 320 aa7.19□□□□□ -1.26
CASP4-203ENST00000444739 CRYBG3Q68DQ2 2970 aa7.19□□□□□ -1.26
CASP4-203ENST00000444739 TRAV13-2A0A0B4J235 113 aa7.18□□□□□ -1.26
CASP4-203ENST00000444739 RBMY1BA6NDE4 496 aaKnown RBP7.18□□□□□ -1.26
CASP4-203ENST00000444739 RBMY1EA6NEQ0 496 aaKnown RBP7.18□□□□□ -1.26
CASP4-203ENST00000444739 DNAL4O96015 105 aa7.18□□□□□ -1.26
CASP4-203ENST00000444739 RBMY1DP0C7P1 496 aaKnown RBP7.18□□□□□ -1.26
CASP4-203ENST00000444739 SYNJ2BPP57105 145 aa7.18□□□□□ -1.26
CASP4-203ENST00000444739 Q6JHZ5 121 aa7.18□□□□□ -1.26
CASP4-203ENST00000444739 OBSCN-AS1Q96MR7 158 aa7.18□□□□□ -1.26
CASP4-203ENST00000444739 LINC00337Q8N6G1 96 aa7.18□□□□□ -1.26
CASP4-203ENST00000444739 C11orf72Q8NBR9 251 aa7.18□□□□□ -1.26
CASP4-203ENST00000444739 CEP295Q9C0D2 2601 aa7.17□□□□□ -1.26
CASP4-203ENST00000444739 A0A087WYN8 130 aa7.17□□□□□ -1.26
CASP4-203ENST00000444739 IGKV3D-7A0A0C4DH55 119 aa7.17□□□□□ -1.26
CASP4-203ENST00000444739 CRPP02741 224 aa7.17□□□□□ -1.26
CASP4-203ENST00000444739 TMEM258P61165 79 aa7.17□□□□□ -1.26
CASP4-203ENST00000444739 KLRB1Q12918 225 aa7.17□□□□□ -1.26
CASP4-203ENST00000444739 SERP2Q8N6R1 65 aa7.17□□□□□ -1.26
CASP4-203ENST00000444739 OR13C6PQ8NH95 151 aa7.17□□□□□ -1.26
CASP4-203ENST00000444739 OVOL2Q9BRP0 275 aa7.17□□□□□ -1.26
CASP4-203ENST00000444739 C14orf132Q9NPU4 83 aa7.17□□□□□ -1.26
CASP4-203ENST00000444739 ZFHX2Q9C0A1 2572 aaPredicted RBP7.17□□□□□ -1.26
CASP4-203ENST00000444739 IGKV2-28A0A075B6P5 120 aa7.16□□□□□ -1.26
CASP4-203ENST00000444739 IGHV4-61A0A0C4DH41 118 aa7.16□□□□□ -1.26
CASP4-203ENST00000444739 RS1O15537 224 aa7.16□□□□□ -1.26
CASP4-203ENST00000444739 IGKV2D-28P01615 120 aa7.16□□□□□ -1.26
CASP4-203ENST00000444739 KIR2DL5BQ8NHK3 375 aa7.16□□□□□ -1.26
CASP4-203ENST00000444739 DPH3Q96FX2 82 aa7.16□□□□□ -1.26
CASP4-203ENST00000444739 LINC00846Q9NV44 126 aa7.16□□□□□ -1.26
CASP4-203ENST00000444739 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.16□□□□□ -1.26
CASP4-203ENST00000444739 DEFB131AP59861 70 aa7.16□□□□□ -1.26
CASP4-203ENST00000444739 A0A087WVE0 104 aa7.15□□□□□ -1.26
CASP4-203ENST00000444739 TMEM89A2RUT3 159 aa7.15□□□□□ -1.26
CASP4-203ENST00000444739 LINC01561Q8N1V8 128 aa7.15□□□□□ -1.26
CASP4-203ENST00000444739 Q96MF0 132 aa7.15□□□□□ -1.26
CASP4-203ENST00000444739 OXTP01178 125 aa7.15□□□□□ -1.27
CASP4-203ENST00000444739 SMIM11BQ8TCY0 68 aa7.15□□□□□ -1.27
CASP4-203ENST00000444739 CDC42SE2Q9NRR3 84 aa7.14□□□□□ -1.27
CASP4-203ENST00000444739 USP17L23D6RBM5 183 aa7.13□□□□□ -1.27
CASP4-203ENST00000444739 WIPF1O43516 503 aa7.13□□□□□ -1.27
CASP4-203ENST00000444739 NTM-AS1Q6ZSK4 140 aa7.13□□□□□ -1.27
CASP4-203ENST00000444739 MIR7-3HGQ8N6C7 128 aa7.13□□□□□ -1.27
CASP4-203ENST00000444739 SND1-IT1Q9HBX3 110 aa7.13□□□□□ -1.27
CASP4-203ENST00000444739 HIVEP3Q5T1R4 2406 aa7.13□□□□□ -1.27
CASP4-203ENST00000444739 H0YGX0 51 aa7.12□□□□□ -1.27
CASP4-203ENST00000444739 DSCR8Q96T75 97 aa7.12□□□□□ -1.27
CASP4-203ENST00000444739 ATRXP46100 2492 aa7.12□□□□□ -1.27
CASP4-203ENST00000444739 NCR3O14931 201 aa7.11□□□□□ -1.27
CASP4-203ENST00000444739 LECT2O14960 151 aa7.1□□□□□ -1.27
CASP4-203ENST00000444739 AVPP01185 164 aa7.1□□□□□ -1.27
CASP4-203ENST00000444739 IGHV4-59P01825 116 aa7.1□□□□□ -1.27
CASP4-203ENST00000444739 COX7B2Q8TF08 81 aa7.1□□□□□ -1.27
CASP4-203ENST00000444739 CCL18P55774 89 aa7.1□□□□□ -1.27
CASP4-203ENST00000444739 SS18Q15532 418 aa7.1□□□□□ -1.27
CASP4-203ENST00000444739 C10orf105Q8TEF2 133 aa7.1□□□□□ -1.27
CASP4-203ENST00000444739 INSP01308 110 aa7.09□□□□□ -1.27
CASP4-203ENST00000444739 RPL36AP83881 106 aaKnown RBP7.09□□□□□ -1.27
CASP4-203ENST00000444739 RPL36ALQ969Q0 106 aaKnown RBP7.09□□□□□ -1.27
CASP4-203ENST00000444739 CREBBPQ92793 2442 aa7.09□□□□□ -1.27
CASP4-203ENST00000444739 TRBV10-1A0A0K0K1A3 114 aa7.09□□□□□ -1.27
CASP4-203ENST00000444739 K7EQD1 137 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms