RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 HIST1H2BCP62807 126 aa9.14□□□□□ -0.95
TM9SF4-204ENST00000442842 Q0VG73 95 aa9.14□□□□□ -0.95
TM9SF4-204ENST00000442842 HIST2H2BEQ16778 126 aa9.14□□□□□ -0.95
TM9SF4-204ENST00000442842 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.14□□□□□ -0.95
TM9SF4-204ENST00000442842 HIST1H2BHQ93079 126 aa9.14□□□□□ -0.95
TM9SF4-204ENST00000442842 HIST1H2BNQ99877 126 aa9.14□□□□□ -0.95
TM9SF4-204ENST00000442842 HIST1H2BMQ99879 126 aa9.14□□□□□ -0.95
TM9SF4-204ENST00000442842 SPANXA1Q9NS26 97 aa9.14□□□□□ -0.95
TM9SF4-204ENST00000442842 HSBP1O75506 76 aa9.13□□□□□ -0.95
TM9SF4-204ENST00000442842 SERF1AO75920 110 aa9.13□□□□□ -0.95
TM9SF4-204ENST00000442842 G0S2P27469 103 aa9.13□□□□□ -0.95
TM9SF4-204ENST00000442842 REG3AQ06141 175 aa9.13□□□□□ -0.95
TM9SF4-204ENST00000442842 C6orf223Q8N319 242 aa9.13□□□□□ -0.95
TM9SF4-204ENST00000442842 CHCHD1Q96BP2 118 aaKnown RBP9.13□□□□□ -0.95
TM9SF4-204ENST00000442842 HBDP02042 147 aa9.12□□□□□ -0.95
TM9SF4-204ENST00000442842 C1orf134Q5TEV5 83 aa9.12□□□□□ -0.95
TM9SF4-204ENST00000442842 ENHOQ6UWT2 76 aa9.12□□□□□ -0.95
TM9SF4-204ENST00000442842 ZNF664Q8N3J9 261 aa9.12□□□□□ -0.95
TM9SF4-204ENST00000442842 TOMM6Q96B49 74 aa9.12□□□□□ -0.95
TM9SF4-204ENST00000442842 OPRPNQ99935 248 aaPredicted RBP9.12□□□□□ -0.95
TM9SF4-204ENST00000442842 CDC42SE2Q9NRR3 84 aa9.12□□□□□ -0.95
TM9SF4-204ENST00000442842 IGLV10-54A0A075B6I4 117 aa9.11□□□□□ -0.95
TM9SF4-204ENST00000442842 IGLV4-3A0A075B6K6 122 aa9.11□□□□□ -0.95
TM9SF4-204ENST00000442842 LINC00310P59036 64 aa9.11□□□□□ -0.95
TM9SF4-204ENST00000442842 SCGB3A1Q96QR1 104 aa9.11□□□□□ -0.95
TM9SF4-204ENST00000442842 TIMM21Q9BVV7 248 aa9.11□□□□□ -0.95
TM9SF4-204ENST00000442842 IGKV2D-24A0A075B6R9 120 aa9.1□□□□□ -0.95
TM9SF4-204ENST00000442842 A0A096LNJ9 63 aa9.1□□□□□ -0.95
TM9SF4-204ENST00000442842 TRAV8-3A0A0A6YYJ7 113 aa9.1□□□□□ -0.95
TM9SF4-204ENST00000442842 Q6ZN92 141 aa9.1□□□□□ -0.95
TM9SF4-204ENST00000442842 FAM19A2Q8N3H0 131 aa9.1□□□□□ -0.95
TM9SF4-204ENST00000442842 CSDC2Q9Y534 153 aaKnown RBP9.1□□□□□ -0.95
TM9SF4-204ENST00000442842 IFITM10A6NMD0 228 aa9.09□□□□□ -0.95
TM9SF4-204ENST00000442842 NDUFA6P56556 154 aa9.09□□□□□ -0.95
TM9SF4-204ENST00000442842 MIAQ16674 131 aa9.09□□□□□ -0.95
TM9SF4-204ENST00000442842 NFE4Q86UQ8 179 aa9.09□□□□□ -0.95
TM9SF4-204ENST00000442842 RMI2Q96E14 147 aa9.09□□□□□ -0.95
TM9SF4-204ENST00000442842 TIMM17AQ99595 171 aa9.09□□□□□ -0.95
TM9SF4-204ENST00000442842 C1orf43Q9BWL3 253 aa9.09□□□□□ -0.95
TM9SF4-204ENST00000442842 PRR34Q9NV39 138 aa9.09□□□□□ -0.95
TM9SF4-204ENST00000442842 PYGO1Q9Y3Y4 419 aa9.09□□□□□ -0.95
TM9SF4-204ENST00000442842 DNAH17Q9UFH2 4485 aa9.08□□□□□ -0.96
TM9SF4-204ENST00000442842 TRAV13-1A0A0B4J241 112 aa9.08□□□□□ -0.96
TM9SF4-204ENST00000442842 PSCAO43653 123 aa9.08□□□□□ -0.96
TM9SF4-204ENST00000442842 NUPR1O60356 82 aa9.08□□□□□ -0.96
TM9SF4-204ENST00000442842 MRPS36P82909 103 aaKnown RBP9.08□□□□□ -0.96
TM9SF4-204ENST00000442842 ZC2HC1BQ5TFG8 222 aa9.08□□□□□ -0.96
TM9SF4-204ENST00000442842 TEX43Q6ZNM6 134 aa9.08□□□□□ -0.96
TM9SF4-204ENST00000442842 TMEM141Q96I45 108 aa9.08□□□□□ -0.96
TM9SF4-204ENST00000442842 FRAS1Q86XX4 4008 aa9.08□□□□□ -0.96
TM9SF4-204ENST00000442842 LINC01549A6NIU2 74 aa9.07□□□□□ -0.96
TM9SF4-204ENST00000442842 IGIPA6NJ69 53 aa9.07□□□□□ -0.96
TM9SF4-204ENST00000442842 ERASQ7Z444 233 aa9.07□□□□□ -0.96
TM9SF4-204ENST00000442842 C2orf88Q9BSF0 95 aa9.07□□□□□ -0.96
TM9SF4-204ENST00000442842 LINC00959A0A1B0GUT2 108 aa9.06□□□□□ -0.96
TM9SF4-204ENST00000442842 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.06□□□□□ -0.96
TM9SF4-204ENST00000442842 XCL1P47992 114 aa9.06□□□□□ -0.96
TM9SF4-204ENST00000442842 PDZD11Q5EBL8 140 aa9.06□□□□□ -0.96
TM9SF4-204ENST00000442842 FAM104AQ969W3 186 aa9.06□□□□□ -0.96
TM9SF4-204ENST00000442842 TM2D2Q9BX73 214 aa9.06□□□□□ -0.96
TM9SF4-204ENST00000442842 VCX2Q9H322 139 aa9.06□□□□□ -0.96
TM9SF4-204ENST00000442842 TRAV8-4A0A0B4J246 113 aa9.05□□□□□ -0.96
TM9SF4-204ENST00000442842 RTL8CO15255 209 aa9.05□□□□□ -0.96
TM9SF4-204ENST00000442842 CCL25O15444 150 aa9.05□□□□□ -0.96
TM9SF4-204ENST00000442842 SS18Q15532 418 aa9.05□□□□□ -0.96
TM9SF4-204ENST00000442842 PAPPA-AS1Q5QFB9 102 aa9.05□□□□□ -0.96
TM9SF4-204ENST00000442842 Q6ZRN7 208 aaPredicted RBP9.05□□□□□ -0.96
TM9SF4-204ENST00000442842 CHCHD10Q8WYQ3 142 aaPredicted RBP9.05□□□□□ -0.96
TM9SF4-204ENST00000442842 GAGE12HA6NDE8 117 aa9.04□□□□□ -0.96
TM9SF4-204ENST00000442842 ATP5LO75964 103 aa9.04□□□□□ -0.96
TM9SF4-204ENST00000442842 NPSP0C0P6 89 aa9.04□□□□□ -0.96
TM9SF4-204ENST00000442842 FABP4P15090 132 aa9.04□□□□□ -0.96
TM9SF4-204ENST00000442842 LINC00173Q6ZV60 143 aa9.04□□□□□ -0.96
TM9SF4-204ENST00000442842 BAALCQ8WXS3 180 aa9.04□□□□□ -0.96
TM9SF4-204ENST00000442842 COX11Q9Y6N1 276 aa9.04□□□□□ -0.96
TM9SF4-204ENST00000442842 FAT2Q9NYQ8 4349 aa9.04□□□□□ -0.96
TM9SF4-204ENST00000442842 LECT2O14960 151 aa9.03□□□□□ -0.96
TM9SF4-204ENST00000442842 LEPROTL1O95214 131 aa9.03□□□□□ -0.96
TM9SF4-204ENST00000442842 AMELXQ99217 191 aa9.03□□□□□ -0.96
TM9SF4-204ENST00000442842 H0Y8G0 127 aa9.02□□□□□ -0.97
TM9SF4-204ENST00000442842 S100A6P06703 90 aa9.02□□□□□ -0.97
TM9SF4-204ENST00000442842 COA6Q5JTJ3 125 aaKnown RBP9.02□□□□□ -0.97
TM9SF4-204ENST00000442842 IFI27L1Q96BM0 104 aa9.02□□□□□ -0.97
TM9SF4-204ENST00000442842 PRSS29PA6NIE9 313 aa9.01□□□□□ -0.97
TM9SF4-204ENST00000442842 UBE2D1P51668 147 aa9.01□□□□□ -0.97
TM9SF4-204ENST00000442842 TNP2Q05952 138 aa9.01□□□□□ -0.97
TM9SF4-204ENST00000442842 PMVKQ15126 192 aa9.01□□□□□ -0.97
TM9SF4-204ENST00000442842 HSPB8Q9UJY1 196 aa9.01□□□□□ -0.97
TM9SF4-204ENST00000442842 PRSS1P07477 247 aa9□□□□□ -0.97
TM9SF4-204ENST00000442842 FOXI1Q12951 378 aa9□□□□□ -0.97
TM9SF4-204ENST00000442842 KRTAP26-1Q6PEX3 210 aa9□□□□□ -0.97
TM9SF4-204ENST00000442842 CST9LQ9H4G1 147 aa9□□□□□ -0.97
TM9SF4-204ENST00000442842 TMA7Q9Y2S6 64 aaKnown RBP9□□□□□ -0.97
TM9SF4-204ENST00000442842 LINC00242Q5T6M2 205 aa8.99□□□□□ -0.97
TM9SF4-204ENST00000442842 CD164L2Q6UWJ8 174 aa8.99□□□□□ -0.97
TM9SF4-204ENST00000442842 LINC00336Q6ZUF6 198 aa8.99□□□□□ -0.97
TM9SF4-204ENST00000442842 MAPKAPK5-AS1Q8N8E1 139 aa8.99□□□□□ -0.97
TM9SF4-204ENST00000442842 DNAH11Q96DT5 4516 aa8.99□□□□□ -0.97
TM9SF4-204ENST00000442842 A0A0J9YXV3 536 aa8.98□□□□□ -0.97
TM9SF4-204ENST00000442842 COX7A2LO14548 114 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms