RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 NDUFC1O43677 76 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 LY6HO94772 140 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 ROMO1P60602 79 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 ZNF117Q03924 483 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 ZNF791Q3KP31 576 aaPredicted RBP2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 DEFB121Q5J5C9 76 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 C1orf134Q5TEV5 83 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 SDIM1Q6ZPB5 146 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 C6orf201Q7Z4U5 140 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 MIR7-3HGQ8N6C7 128 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 SPTSSBQ8NFR3 76 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 ANAPC11Q9NYG5 84 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 CEP295Q9C0D2 2601 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 H3BMM0 161 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 SLC25A20O43772 301 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 GCHFRP30047 84 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 FXYD2P54710 66 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 KLKP1Q107X0 134 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 LINC00483Q53H64 154 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 RPRMLQ8N4K4 120 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 C1orf64Q8NEQ6 169 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 SMCR5Q8TEV8 140 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 DYNLRB2Q8TF09 96 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 UBE2WQ96B02 151 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 KIAA1549LQ6ZVL6 1849 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 PTPRSQ13332 1948 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 SDK2Q58EX2 2172 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 GBF1Q92538 1859 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 MYO16Q9Y6X6 1858 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 TRAV3A0A0B4J244 114 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 HCG22E2RYF7 251 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 K7ERS5 55 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 CISD3P0C7P0 127 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 MIAQ16674 131 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 SPANXN1Q5VSR9 72 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 SFTA2Q6UW10 78 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 SPANXA2-OT1Q8N9U9 137 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 Q96M85 177 aa2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 NHP2Q9NX24 153 aaKnown RBP2.51□□□□□ -2.01
CDC42BPA-207ENST00000441725 COL27A1Q8IZC6 1860 aaPredicted RBP2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 TMSB15BA0A087X1C1 80 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 TRBV7-1A0A0A6YYK4 115 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 IQCF6A8MYZ5 107 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 LHBP01229 141 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 TFF1P04155 84 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 NCBP2-AS2Q69YL0 99 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 TMEM105Q8N8V8 129 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 C2CD3Q4AC94 2353 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 SPTAN1Q13813 2472 aaKnown RBP2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 LOC285095A0A1B0GVY8 99 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 FAM223BA6NKX1 122 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 IL9P15248 144 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 KRTAP10-12P60413 245 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 UBE2D3P61077 147 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 UBE2D2P62837 147 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 LYZL1Q6UWQ5 148 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 LYZL2Q7Z4W2 148 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 SMIM7Q9BQ49 75 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 LOC285556D6RIA3 1793 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 MPDZO75970 2070 aa2.5□□□□□ -2.01
CDC42BPA-207ENST00000441725 A0A0B4J2C4 111 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 hDV103S1A0JD37 113 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 SH2D1AO60880 128 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 IGHV1-46P01743 117 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 IGF2RP11717 2491 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 C9orf116Q5BN46 136 aaPredicted RBP2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 LCE3CQ5T5A8 94 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 SLC48A1Q6P1K1 146 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 VMO1Q7Z5L0 202 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 RELNP78509 3460 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 HEATR1Q9H583 2144 aaKnown RBP2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 MDC1Q14676 2089 aaKnown RBP2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 SPTA1P02549 2419 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 LAMA4Q16363 1823 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 IGLV3-16A0A075B6K0 115 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 A8MUU9 505 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 E7EUB6 86 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 WISP3O95389 354 aaPredicted RBP2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 NPYP01303 97 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 CRPP02741 224 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 CLPSP04118 112 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 ZNF22P17026 224 aaPredicted RBP2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 C20orf197Q8N268 126 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 Q8N9L7 120 aa2.49□□□□□ -2.01
CDC42BPA-207ENST00000441725 DMXL2Q8TDJ6 3036 aa2.48□□□□□ -2.01
CDC42BPA-207ENST00000441725 IGKV1OR2-108A0A075B7D4 117 aa2.48□□□□□ -2.01
CDC42BPA-207ENST00000441725 TRAV22A0A0B4J277 110 aa2.48□□□□□ -2.01
CDC42BPA-207ENST00000441725 C10orf142B7Z368 130 aa2.48□□□□□ -2.01
CDC42BPA-207ENST00000441725 BCE1O60756 84 aa2.48□□□□□ -2.01
CDC42BPA-207ENST00000441725 PPP1R1CQ8WVI7 109 aa2.48□□□□□ -2.01
CDC42BPA-207ENST00000441725 MALRD1Q5VYJ5 2156 aa2.48□□□□□ -2.01
CDC42BPA-207ENST00000441725 CPAMD8Q8IZJ3 1885 aa2.48□□□□□ -2.01
CDC42BPA-207ENST00000441725 OTOGLQ3ZCN5 2332 aa2.48□□□□□ -2.01
CDC42BPA-207ENST00000441725 H3BVH4 76 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 IL4P05112 153 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 KRTAP11-1Q8IUC1 163 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 Q8N6K4 173 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 TIMM21Q9BVV7 248 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 ICOSQ9Y6W8 199 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms