RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 DNAL4O96015 105 aa5.55□□□□□ -1.52
HDAC9-214ENST00000441542 OXTP01178 125 aa5.55□□□□□ -1.52
HDAC9-214ENST00000441542 CELSR1Q9NYQ6 3014 aa5.55□□□□□ -1.52
HDAC9-214ENST00000441542 ZFP36P26651 326 aaKnown RBP5.54□□□□□ -1.52
HDAC9-214ENST00000441542 SAA4P35542 130 aa5.54□□□□□ -1.52
HDAC9-214ENST00000441542 PIK3CD-AS1Q5SR53 167 aa5.54□□□□□ -1.52
HDAC9-214ENST00000441542 BRD3OSQ6XYD6 125 aa5.54□□□□□ -1.52
HDAC9-214ENST00000441542 ITLN2Q8WWU7 325 aaPredicted RBP5.54□□□□□ -1.52
HDAC9-214ENST00000441542 CDKN2A-AS1Q9UH64 79 aa5.54□□□□□ -1.52
HDAC9-214ENST00000441542 TRBV7-1A0A0A6YYK4 115 aa5.54□□□□□ -1.52
HDAC9-214ENST00000441542 IGHV1-58A0A0C4DH39 117 aa5.54□□□□□ -1.52
HDAC9-214ENST00000441542 TRBV27A0A0K0K1C4 114 aa5.54□□□□□ -1.52
HDAC9-214ENST00000441542 ATP5G1P05496 136 aa5.54□□□□□ -1.52
HDAC9-214ENST00000441542 CD164Q04900 197 aa5.54□□□□□ -1.52
HDAC9-214ENST00000441542 WNK1Q9H4A3 2382 aa5.54□□□□□ -1.52
HDAC9-214ENST00000441542 PTPN13Q12923 2485 aa5.54□□□□□ -1.52
HDAC9-214ENST00000441542 CD164L2Q6UWJ8 174 aa5.53□□□□□ -1.52
HDAC9-214ENST00000441542 FAM218AQ96MZ4 157 aa5.53□□□□□ -1.52
HDAC9-214ENST00000441542 VPREB1P12018 145 aa5.53□□□□□ -1.52
HDAC9-214ENST00000441542 TOMM7Q9P0U1 55 aa5.53□□□□□ -1.52
HDAC9-214ENST00000441542 HECTD1Q9ULT8 2610 aa5.53□□□□□ -1.52
HDAC9-214ENST00000441542 IGHV4OR15-8A0A075B7B6 117 aa5.53□□□□□ -1.52
HDAC9-214ENST00000441542 A0A087WW49 117 aa5.53□□□□□ -1.52
HDAC9-214ENST00000441542 FAM240AA0A1B0GVK7 77 aa5.53□□□□□ -1.52
HDAC9-214ENST00000441542 SLPIP03973 132 aa5.53□□□□□ -1.52
HDAC9-214ENST00000441542 PRB1P04280 392 aa5.53□□□□□ -1.52
HDAC9-214ENST00000441542 C9orf129Q5T035 196 aaKnown RBP5.52□□□□□ -1.53
HDAC9-214ENST00000441542 IGFL2Q6UWQ7 119 aa5.52□□□□□ -1.53
HDAC9-214ENST00000441542 PRIMA1Q86XR5 153 aa5.52□□□□□ -1.53
HDAC9-214ENST00000441542 VSIG2Q96IQ7 327 aa5.52□□□□□ -1.53
HDAC9-214ENST00000441542 MINOS1Q5TGZ0 78 aa5.52□□□□□ -1.53
HDAC9-214ENST00000441542 Q96MF0 132 aa5.52□□□□□ -1.53
HDAC9-214ENST00000441542 KMT2BQ9UMN6 2715 aaPredicted RBP5.52□□□□□ -1.53
HDAC9-214ENST00000441542 IGHV1-69P01742 117 aa5.52□□□□□ -1.53
HDAC9-214ENST00000441542 HILS1P60008 231 aa5.52□□□□□ -1.53
HDAC9-214ENST00000441542 FLNCQ14315 2725 aa5.51□□□□□ -1.53
HDAC9-214ENST00000441542 FAM236DA0A1B0GTK5 79 aa5.51□□□□□ -1.53
HDAC9-214ENST00000441542 ODF3BA8MYP8 253 aa5.51□□□□□ -1.53
HDAC9-214ENST00000441542 COX7A2LO14548 114 aa5.51□□□□□ -1.53
HDAC9-214ENST00000441542 FAM236CP0DP71 79 aa5.51□□□□□ -1.53
HDAC9-214ENST00000441542 LINC00308Q8TCZ7 52 aa5.51□□□□□ -1.53
HDAC9-214ENST00000441542 USP17L23D6RBM5 183 aa5.51□□□□□ -1.53
HDAC9-214ENST00000441542 Q8N6K4 173 aa5.51□□□□□ -1.53
HDAC9-214ENST00000441542 DCANP1Q8TF63 244 aa5.51□□□□□ -1.53
HDAC9-214ENST00000441542 C11orf68Q9H3H3 251 aaKnown RBP5.51□□□□□ -1.53
HDAC9-214ENST00000441542 TRAV23DV6A0A075B6W5 121 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 IGHV3OR16-12A0A075B7B8 117 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 K7ENP7 123 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 NCR3O14931 201 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 SOSTDC1Q6X4U4 206 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 FAM19A4Q96LR4 140 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 LINC00467Q9BRT7 94 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 LENEPQ9Y5L5 61 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 SONP18583 2426 aaKnown RBP5.5□□□□□ -1.53
HDAC9-214ENST00000441542 COL27A1Q8IZC6 1860 aaPredicted RBP5.5□□□□□ -1.53
HDAC9-214ENST00000441542 ATOX1O00244 68 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 ACYP1P07311 99 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 COX6A2Q02221 97 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 Q5XG85 94 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 FAM223AQ8IWN6 122 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 DPH3Q96FX2 82 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 IMUPQ9GZP8 106 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 NAV2Q8IVL1 2488 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 CCL21O00585 134 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 KRTAP21-3Q3LHN1 58 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.5□□□□□ -1.53
HDAC9-214ENST00000441542 C2orf48Q96LS8 159 aa5.5□□□□□ -1.53
HDAC9-214ENST00000441542 SETD2Q9BYW2 2564 aaPredicted RBP5.49□□□□□ -1.53
HDAC9-214ENST00000441542 IGHV3-53P01767 116 aa5.49□□□□□ -1.53
HDAC9-214ENST00000441542 IGHG2P01859 326 aa5.49□□□□□ -1.53
HDAC9-214ENST00000441542 HIST2H2BCQ6DN03 193 aa5.49□□□□□ -1.53
HDAC9-214ENST00000441542 HIST2H2BDQ6DRA6 164 aa5.49□□□□□ -1.53
HDAC9-214ENST00000441542 U3KQE9 123 aa5.49□□□□□ -1.53
HDAC9-214ENST00000441542 IGHV1OR15-1A0A075B7D0 117 aa5.49□□□□□ -1.53
HDAC9-214ENST00000441542 RPL18AQ02543 176 aaKnown RBP5.49□□□□□ -1.53
HDAC9-214ENST00000441542 LINC00846Q9NV44 126 aa5.49□□□□□ -1.53
HDAC9-214ENST00000441542 GCN1Q92616 2671 aaKnown RBP5.49□□□□□ -1.53
HDAC9-214ENST00000441542 BLCAPP62952 87 aa5.48□□□□□ -1.53
HDAC9-214ENST00000441542 Q6ZSN1 163 aa5.48□□□□□ -1.53
HDAC9-214ENST00000441542 C20orf197Q8N268 126 aa5.48□□□□□ -1.53
HDAC9-214ENST00000441542 BAHCC1Q9P281 2608 aa5.48□□□□□ -1.53
HDAC9-214ENST00000441542 A0A0J9YX75 114 aa5.48□□□□□ -1.53
HDAC9-214ENST00000441542 SOCS3O14543 225 aa5.48□□□□□ -1.53
HDAC9-214ENST00000441542 MRPS36P82909 103 aaKnown RBP5.48□□□□□ -1.53
HDAC9-214ENST00000441542 SERTAD4-AS1Q5TG53 156 aa5.48□□□□□ -1.53
HDAC9-214ENST00000441542 A0A087WYN8 130 aa5.48□□□□□ -1.53
HDAC9-214ENST00000441542 TRBV6-5A0A0K0K1A5 114 aa5.48□□□□□ -1.53
HDAC9-214ENST00000441542 MED14OSP0DP75 135 aa5.48□□□□□ -1.53
HDAC9-214ENST00000441542 DEFB121Q5J5C9 76 aa5.48□□□□□ -1.53
HDAC9-214ENST00000441542 C9orf85Q96MD7 179 aa5.48□□□□□ -1.53
HDAC9-214ENST00000441542 LECT2O14960 151 aa5.47□□□□□ -1.53
HDAC9-214ENST00000441542 INAFM2P0DMQ5 153 aa5.47□□□□□ -1.53
HDAC9-214ENST00000441542 PFN2P35080 140 aa5.47□□□□□ -1.53
HDAC9-214ENST00000441542 WFDC11Q8NEX6 87 aa5.47□□□□□ -1.53
HDAC9-214ENST00000441542 SETXQ7Z333 2677 aaKnown RBP5.47□□□□□ -1.53
HDAC9-214ENST00000441542 FAM223BA6NKX1 122 aa5.47□□□□□ -1.53
HDAC9-214ENST00000441542 KLLNB2CW77 178 aa5.47□□□□□ -1.53
HDAC9-214ENST00000441542 CRPP02741 224 aa5.47□□□□□ -1.53
HDAC9-214ENST00000441542 CRYGAP11844 174 aa5.47□□□□□ -1.53
HDAC9-214ENST00000441542 C10orf99Q6UWK7 81 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms