RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 TMEM126AQ9H061 195 aa14.78□□□□□ -0.04
SHOX2-203ENST00000441443 VPREB3Q9UKI3 123 aa14.78□□□□□ -0.04
SHOX2-203ENST00000441443 IGHV3-38A0A0C4DH36 116 aa14.77□□□□□ -0.04
SHOX2-203ENST00000441443 C10orf99Q6UWK7 81 aa14.77□□□□□ -0.05
SHOX2-203ENST00000441443 UBE2D4Q9Y2X8 147 aa14.76□□□□□ -0.05
SHOX2-203ENST00000441443 WNK1Q9H4A3 2382 aa14.76□□□□□ -0.05
SHOX2-203ENST00000441443 SNRPD3P62318 126 aaKnown RBP14.76□□□□□ -0.05
SHOX2-203ENST00000441443 IGHV4-59P01825 116 aa14.75□□□□□ -0.05
SHOX2-203ENST00000441443 C9orf153Q5TBE3 101 aa14.75□□□□□ -0.05
SHOX2-203ENST00000441443 Q6ZSN1 163 aa14.75□□□□□ -0.05
SHOX2-203ENST00000441443 Q8N2B8 174 aa14.75□□□□□ -0.05
SHOX2-203ENST00000441443 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.75□□□□□ -0.05
SHOX2-203ENST00000441443 CHCHD7Q9BUK0 85 aa14.75□□□□□ -0.05
SHOX2-203ENST00000441443 H3BUA1 57 aa14.75□□□□□ -0.05
SHOX2-203ENST00000441443 LINC00467Q9BRT7 94 aa14.75□□□□□ -0.05
SHOX2-203ENST00000441443 RBMY1A1P0DJD3 496 aaKnown RBP14.74□□□□□ -0.05
SHOX2-203ENST00000441443 RBMY1CP0DJD4 496 aa14.74□□□□□ -0.05
SHOX2-203ENST00000441443 LINC00694P0DN24 101 aa14.74□□□□□ -0.05
SHOX2-203ENST00000441443 RBMY1FQ15415 496 aaKnown RBP14.74□□□□□ -0.05
SHOX2-203ENST00000441443 A6NDX4 124 aa14.74□□□□□ -0.05
SHOX2-203ENST00000441443 DAZ2Q13117 558 aaKnown RBP14.74□□□□□ -0.05
SHOX2-203ENST00000441443 DAZ4Q86SG3 579 aaKnown RBP14.74□□□□□ -0.05
SHOX2-203ENST00000441443 DAZ3Q9NR90 486 aaKnown RBP14.74□□□□□ -0.05
SHOX2-203ENST00000441443 B4DSR2 109 aa14.73□□□□□ -0.05
SHOX2-203ENST00000441443 K7EMT4 169 aa14.73□□□□□ -0.05
SHOX2-203ENST00000441443 LINC00308Q8TCZ7 52 aa14.73□□□□□ -0.05
SHOX2-203ENST00000441443 IGLV1-40P01703 118 aa14.73□□□□□ -0.05
SHOX2-203ENST00000441443 ACYP1P07311 99 aa14.72□□□□□ -0.05
SHOX2-203ENST00000441443 Q9H8V8 135 aa14.72□□□□□ -0.05
SHOX2-203ENST00000441443 COX7A2LO14548 114 aa14.71□□□□□ -0.05
SHOX2-203ENST00000441443 DEFB112Q30KQ8 113 aa14.71□□□□□ -0.05
SHOX2-203ENST00000441443 IMUPQ9GZP8 106 aa14.71□□□□□ -0.05
SHOX2-203ENST00000441443 KLK5Q9Y337 293 aaPredicted RBP14.71□□□□□ -0.05
SHOX2-203ENST00000441443 ACANP16112 2415 aa14.71□□□□□ -0.05
SHOX2-203ENST00000441443 TIMM17BO60830 172 aa14.71□□□□□ -0.05
SHOX2-203ENST00000441443 COX6A2Q02221 97 aa14.71□□□□□ -0.05
SHOX2-203ENST00000441443 NACAE9PAV3 2078 aa14.71□□□□□ -0.05
SHOX2-203ENST00000441443 MTORP42345 2549 aa14.71□□□□□ -0.06
SHOX2-203ENST00000441443 K7EQG2 157 aa14.71□□□□□ -0.06
SHOX2-203ENST00000441443 NDUFA1O15239 70 aa14.71□□□□□ -0.06
SHOX2-203ENST00000441443 CIRBPQ14011 172 aaKnown RBP14.71□□□□□ -0.06
SHOX2-203ENST00000441443 C3orf22Q8N5N4 141 aa14.7□□□□□ -0.06
SHOX2-203ENST00000441443 LINC00643Q86TS7 51 aa14.7□□□□□ -0.06
SHOX2-203ENST00000441443 NF1P21359 2839 aa14.7□□□□□ -0.06
SHOX2-203ENST00000441443 SOSTDC1Q6X4U4 206 aa14.69□□□□□ -0.06
SHOX2-203ENST00000441443 LOC107984640A0A0U1RRK4 108 aa14.69□□□□□ -0.06
SHOX2-203ENST00000441443 NDUFA7O95182 113 aa14.68□□□□□ -0.06
SHOX2-203ENST00000441443 BAALC-AS2P0C853 105 aa14.68□□□□□ -0.06
SHOX2-203ENST00000441443 FAM218AQ96MZ4 157 aa14.66□□□□□ -0.06
SHOX2-203ENST00000441443 SYNJ2BPP57105 145 aa14.66□□□□□ -0.06
SHOX2-203ENST00000441443 HERVK_113P63121 156 aa14.66□□□□□ -0.06
SHOX2-203ENST00000441443 BBC3Q96PG8 261 aaPredicted RBP14.66□□□□□ -0.06
SHOX2-203ENST00000441443 TIRAPP58753 221 aa14.66□□□□□ -0.06
SHOX2-203ENST00000441443 DGAT2L7PQ6IED9 249 aa14.66□□□□□ -0.06
SHOX2-203ENST00000441443 UQCRQO14949 82 aa14.65□□□□□ -0.06
SHOX2-203ENST00000441443 GAGE2AQ6NT46 116 aa14.65□□□□□ -0.06
SHOX2-203ENST00000441443 C22orf24Q9Y442 160 aa14.65□□□□□ -0.06
SHOX2-203ENST00000441443 Q9HAA7 133 aa14.64□□□□□ -0.07
SHOX2-203ENST00000441443 CFHR3Q02985 330 aa14.64□□□□□ -0.07
SHOX2-203ENST00000441443 BEAN1Q3B7T3 259 aa14.64□□□□□ -0.07
SHOX2-203ENST00000441443 EDA2RQ9HAV5 297 aa14.64□□□□□ -0.07
SHOX2-203ENST00000441443 HIST2H2BDQ6DRA6 164 aa14.63□□□□□ -0.07
SHOX2-203ENST00000441443 IGHV3OR16-12A0A075B7B8 117 aa14.63□□□□□ -0.07
SHOX2-203ENST00000441443 HOXD3P31249 432 aaPredicted RBP14.63□□□□□ -0.07
SHOX2-203ENST00000441443 KRTAP10-9P60411 292 aa14.63□□□□□ -0.07
SHOX2-203ENST00000441443 RS1O15537 224 aa14.62□□□□□ -0.07
SHOX2-203ENST00000441443 LINC00526Q96FQ7 95 aa14.62□□□□□ -0.07
SHOX2-203ENST00000441443 NOTCH2Q04721 2471 aa14.62□□□□□ -0.07
SHOX2-203ENST00000441443 PIK3CD-AS1Q5SR53 167 aa14.61□□□□□ -0.07
SHOX2-203ENST00000441443 LINC01356Q8N9X3 169 aa14.61□□□□□ -0.07
SHOX2-203ENST00000441443 FLNAP21333 2647 aaKnown RBP14.61□□□□□ -0.07
SHOX2-203ENST00000441443 IGLV5-45A0A087WSX0 123 aa14.61□□□□□ -0.07
SHOX2-203ENST00000441443 PRIMA1Q86XR5 153 aa14.61□□□□□ -0.07
SHOX2-203ENST00000441443 DNAJC30Q96LL9 226 aa14.61□□□□□ -0.07
SHOX2-203ENST00000441443 APCP25054 2843 aa14.61□□□□□ -0.07
SHOX2-203ENST00000441443 CHD6Q8TD26 2715 aa14.61□□□□□ -0.07
SHOX2-203ENST00000441443 PSMB8P28062 276 aa14.6□□□□□ -0.07
SHOX2-203ENST00000441443 LINC00242Q5T6M2 205 aa14.6□□□□□ -0.07
SHOX2-203ENST00000441443 TRAV13-1A0A0B4J241 112 aa14.6□□□□□ -0.07
SHOX2-203ENST00000441443 TRACP01848 142 aa14.6□□□□□ -0.07
SHOX2-203ENST00000441443 PEMTQ9UBM1 199 aa14.6□□□□□ -0.07
SHOX2-203ENST00000441443 ITPR3Q14573 2671 aa14.6□□□□□ -0.07
SHOX2-203ENST00000441443 UBR5O95071 2799 aaPredicted RBP14.59□□□□□ -0.07
SHOX2-203ENST00000441443 SDIM1Q6ZPB5 146 aa14.59□□□□□ -0.07
SHOX2-203ENST00000441443 C5orf38Q86SI9 138 aa14.59□□□□□ -0.07
SHOX2-203ENST00000441443 IGLV5-39A0A0G2JS06 123 aa14.58□□□□□ -0.07
SHOX2-203ENST00000441443 JMJD1CQ15652 2540 aa14.58□□□□□ -0.07
SHOX2-203ENST00000441443 DEFB131AP59861 70 aa14.58□□□□□ -0.08
SHOX2-203ENST00000441443 SMIM1B2RUZ4 78 aa14.57□□□□□ -0.08
SHOX2-203ENST00000441443 COX7CP15954 63 aa14.57□□□□□ -0.08
SHOX2-203ENST00000441443 CSDC2Q9Y534 153 aaKnown RBP14.57□□□□□ -0.08
SHOX2-203ENST00000441443 C2CD3Q4AC94 2353 aa14.56□□□□□ -0.08
SHOX2-203ENST00000441443 RBMY1BA6NDE4 496 aaKnown RBP14.56□□□□□ -0.08
SHOX2-203ENST00000441443 RBMY1EA6NEQ0 496 aaKnown RBP14.56□□□□□ -0.08
SHOX2-203ENST00000441443 RBMY1DP0C7P1 496 aaKnown RBP14.56□□□□□ -0.08
SHOX2-203ENST00000441443 DEFB136Q30KP8 78 aa14.55□□□□□ -0.08
SHOX2-203ENST00000441443 KHDC1LQ5JSQ8 128 aa14.55□□□□□ -0.08
SHOX2-203ENST00000441443 C2orf48Q96LS8 159 aa14.55□□□□□ -0.08
SHOX2-203ENST00000441443 IGHV3-53P01767 116 aa14.54□□□□□ -0.08
SHOX2-203ENST00000441443 CXCL5P42830 114 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms