RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 B9D2Q9BPU9 175 aa7.41□□□□□ -1.22
SYNE2-206ENST00000441438 DYNLRB1Q9NP97 96 aa7.41□□□□□ -1.22
SYNE2-206ENST00000441438 ZNRD1Q9P1U0 126 aa7.41□□□□□ -1.22
SYNE2-206ENST00000441438 ANKHD1Q8IWZ3 2542 aaKnown RBP7.41□□□□□ -1.22
SYNE2-206ENST00000441438 CELSR1Q9NYQ6 3014 aa7.41□□□□□ -1.22
SYNE2-206ENST00000441438 CGB3P0DN86 165 aa7.41□□□□□ -1.22
SYNE2-206ENST00000441438 CGB7P0DN87 165 aa7.41□□□□□ -1.22
SYNE2-206ENST00000441438 RPL39P5Q59GN2 51 aa7.41□□□□□ -1.22
SYNE2-206ENST00000441438 ARHGAP32A7KAX9 2087 aa7.41□□□□□ -1.22
SYNE2-206ENST00000441438 SPG11Q96JI7 2443 aa7.41□□□□□ -1.22
SYNE2-206ENST00000441438 TRAV3A0A0B4J244 114 aa7.41□□□□□ -1.22
SYNE2-206ENST00000441438 MGST1P10620 155 aaKnown RBP7.41□□□□□ -1.22
SYNE2-206ENST00000441438 GFRA4Q9GZZ7 299 aa7.41□□□□□ -1.22
SYNE2-206ENST00000441438 CRIP2P52943 208 aaPredicted RBP7.4□□□□□ -1.22
SYNE2-206ENST00000441438 ORMDL3Q8N138 153 aa7.4□□□□□ -1.22
SYNE2-206ENST00000441438 SMCR5Q8TEV8 140 aa7.4□□□□□ -1.22
SYNE2-206ENST00000441438 RETNLBQ9BQ08 111 aa7.4□□□□□ -1.22
SYNE2-206ENST00000441438 TMEM14BQ9NUH8 114 aa7.4□□□□□ -1.22
SYNE2-206ENST00000441438 PROP1O75360 226 aa7.4□□□□□ -1.23
SYNE2-206ENST00000441438 C15orf32Q32M92 178 aa7.4□□□□□ -1.23
SYNE2-206ENST00000441438 Q6ZRP5 223 aa7.4□□□□□ -1.23
SYNE2-206ENST00000441438 MALRD1Q5VYJ5 2156 aa7.4□□□□□ -1.23
SYNE2-206ENST00000441438 SPTSSBQ8NFR3 76 aa7.39□□□□□ -1.23
SYNE2-206ENST00000441438 ZNF355PQ9NSJ1 428 aa7.39□□□□□ -1.23
SYNE2-206ENST00000441438 HIGD1CA8MV81 97 aa7.39□□□□□ -1.23
SYNE2-206ENST00000441438 TSPEAR-AS2P59090 65 aa7.39□□□□□ -1.23
SYNE2-206ENST00000441438 MRPL51Q4U2R6 128 aaKnown RBP7.39□□□□□ -1.23
SYNE2-206ENST00000441438 C19orf84I3L1E1 186 aa7.38□□□□□ -1.23
SYNE2-206ENST00000441438 CMC4P56277 68 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-206ENST00000441438 PRB3Q04118 309 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-206ENST00000441438 FAM167A-AS1Q96KT0 104 aa7.38□□□□□ -1.23
SYNE2-206ENST00000441438 A0A0B4J2C4 111 aa7.38□□□□□ -1.23
SYNE2-206ENST00000441438 E7EUB6 86 aa7.38□□□□□ -1.23
SYNE2-206ENST00000441438 TENM4Q6N022 2769 aa7.38□□□□□ -1.23
SYNE2-206ENST00000441438 IGHV7-81A0A0B4J1V7 117 aa7.38□□□□□ -1.23
SYNE2-206ENST00000441438 RPL37AP8A6NKH3 93 aa7.38□□□□□ -1.23
SYNE2-206ENST00000441438 EGFEM1PQ0D2K5 195 aa7.38□□□□□ -1.23
SYNE2-206ENST00000441438 SCGB3A1Q96QR1 104 aa7.38□□□□□ -1.23
SYNE2-206ENST00000441438 PHLDA3Q9Y5J5 127 aa7.38□□□□□ -1.23
SYNE2-206ENST00000441438 IFI27L1Q96BM0 104 aa7.37□□□□□ -1.23
SYNE2-206ENST00000441438 IGHV3-16A0A0C4DH30 117 aa7.37□□□□□ -1.23
SYNE2-206ENST00000441438 TRBV10-2A0A0K0K1G8 114 aa7.37□□□□□ -1.23
SYNE2-206ENST00000441438 VMO1Q7Z5L0 202 aa7.37□□□□□ -1.23
SYNE2-206ENST00000441438 CSNK1G2-AS1Q8NCQ2 148 aa7.37□□□□□ -1.23
SYNE2-206ENST00000441438 IGHV1-18A0A0C4DH31 117 aa7.36□□□□□ -1.23
SYNE2-206ENST00000441438 COX7A1P24310 79 aa7.36□□□□□ -1.23
SYNE2-206ENST00000441438 IGKV1OR2-108A0A075B7D4 117 aa7.36□□□□□ -1.23
SYNE2-206ENST00000441438 A8MU10 97 aa7.36□□□□□ -1.23
SYNE2-206ENST00000441438 BCE1O60756 84 aa7.36□□□□□ -1.23
SYNE2-206ENST00000441438 RMI2Q96E14 147 aa7.36□□□□□ -1.23
SYNE2-206ENST00000441438 RPP21Q9H633 154 aaKnown RBP7.36□□□□□ -1.23
SYNE2-206ENST00000441438 LINC00574Q9H8X3 128 aa7.36□□□□□ -1.23
SYNE2-206ENST00000441438 F8WEM9 126 aa7.36□□□□□ -1.23
SYNE2-206ENST00000441438 TMEM190Q8WZ59 177 aa7.36□□□□□ -1.23
SYNE2-206ENST00000441438 TRBV25-1A0A075B6N4 114 aa7.35□□□□□ -1.23
SYNE2-206ENST00000441438 TMEM141Q96I45 108 aa7.35□□□□□ -1.23
SYNE2-206ENST00000441438 CENPEQ02224 2701 aa7.35□□□□□ -1.23
SYNE2-206ENST00000441438 A0A1B0GW54 56 aa7.35□□□□□ -1.23
SYNE2-206ENST00000441438 PRCDQ00LT1 54 aa7.35□□□□□ -1.23
SYNE2-206ENST00000441438 IGKV3-15P01624 115 aa7.34□□□□□ -1.23
SYNE2-206ENST00000441438 DSCR9P59020 149 aa7.34□□□□□ -1.23
SYNE2-206ENST00000441438 APELAP0DMC3 54 aa7.34□□□□□ -1.23
SYNE2-206ENST00000441438 ZFHX3Q15911 3703 aa7.34□□□□□ -1.23
SYNE2-206ENST00000441438 CUBNO60494 3623 aa7.34□□□□□ -1.24
SYNE2-206ENST00000441438 PRSS1P07477 247 aa7.33□□□□□ -1.24
SYNE2-206ENST00000441438 HCG22E2RYF7 251 aa7.33□□□□□ -1.24
SYNE2-206ENST00000441438 IGLV1-51P01701 117 aa7.33□□□□□ -1.24
SYNE2-206ENST00000441438 TRBV7-3A0A075B6L6 115 aa7.33□□□□□ -1.24
SYNE2-206ENST00000441438 SPANXN1Q5VSR9 72 aa7.33□□□□□ -1.24
SYNE2-206ENST00000441438 NDUFA11Q86Y39 141 aa7.33□□□□□ -1.24
SYNE2-206ENST00000441438 LINC01549A6NIU2 74 aa7.32□□□□□ -1.24
SYNE2-206ENST00000441438 RPL27AP46776 148 aaKnown RBP7.32□□□□□ -1.24
SYNE2-206ENST00000441438 UBE2D1P51668 147 aa7.32□□□□□ -1.24
SYNE2-206ENST00000441438 ASB16-AS1Q495Z4 193 aa7.32□□□□□ -1.24
SYNE2-206ENST00000441438 TIMM21Q9BVV7 248 aa7.32□□□□□ -1.24
SYNE2-206ENST00000441438 TRBV6-1A0A0K0K1D8 114 aa7.31□□□□□ -1.24
SYNE2-206ENST00000441438 CYSRT1A8MQ03 144 aa7.31□□□□□ -1.24
SYNE2-206ENST00000441438 DYNLRB2Q8TF09 96 aa7.31□□□□□ -1.24
SYNE2-206ENST00000441438 IGKV2D-26A0A0A0MRZ7 120 aa7.31□□□□□ -1.24
SYNE2-206ENST00000441438 Q8N814 137 aa7.31□□□□□ -1.24
SYNE2-206ENST00000441438 MUC4Q99102 2169 aa7.31□□□□□ -1.24
SYNE2-206ENST00000441438 VPS13CQ709C8 3753 aa7.31□□□□□ -1.24
SYNE2-206ENST00000441438 IGHV3-72A0A0B4J1Y9 119 aa7.31□□□□□ -1.24
SYNE2-206ENST00000441438 TRAV22A0A0B4J277 110 aa7.31□□□□□ -1.24
SYNE2-206ENST00000441438 KRTAP4-16G5E9R7 235 aaPredicted RBP7.31□□□□□ -1.24
SYNE2-206ENST00000441438 PRSS2P07478 247 aa7.31□□□□□ -1.24
SYNE2-206ENST00000441438 ZFAND2AQ8N6M9 145 aa7.31□□□□□ -1.24
SYNE2-206ENST00000441438 HRNRQ86YZ3 2850 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-206ENST00000441438 K7EMI3 77 aa7.3□□□□□ -1.24
SYNE2-206ENST00000441438 SAA2P0DJI9 122 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-206ENST00000441438 C10orf113Q5VZT2 155 aa7.3□□□□□ -1.24
SYNE2-206ENST00000441438 Q8N6K4 173 aa7.3□□□□□ -1.24
SYNE2-206ENST00000441438 SMAD5-AS1Q9Y6J3 95 aa7.3□□□□□ -1.24
SYNE2-206ENST00000441438 CRYBG3Q68DQ2 2970 aa7.29□□□□□ -1.24
SYNE2-206ENST00000441438 CCL3L1P16619 93 aa7.29□□□□□ -1.24
SYNE2-206ENST00000441438 LINC00322Q6ZN03 302 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-206ENST00000441438 FAM215AQ9Y5M1 114 aa7.29□□□□□ -1.24
SYNE2-206ENST00000441438 PTPN13Q12923 2485 aa7.29□□□□□ -1.24
SYNE2-206ENST00000441438 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.29□□□□□ -1.24
SYNE2-206ENST00000441438 SRRM5B3KS81 715 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms