RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 ACANP16112 2415 aa12.33□□□□□ -0.44
PMS1-213ENST00000441310 IGHV1-58A0A0C4DH39 117 aa12.33□□□□□ -0.44
PMS1-213ENST00000441310 UBR5O95071 2799 aaPredicted RBP12.32□□□□□ -0.44
PMS1-213ENST00000441310 TRBV7-1A0A0A6YYK4 115 aa12.32□□□□□ -0.44
PMS1-213ENST00000441310 TRBV6-5A0A0K0K1A5 114 aa12.32□□□□□ -0.44
PMS1-213ENST00000441310 C5orf38Q86SI9 138 aa12.32□□□□□ -0.44
PMS1-213ENST00000441310 DSCR8Q96T75 97 aa12.32□□□□□ -0.44
PMS1-213ENST00000441310 M0QY20 66 aa12.32□□□□□ -0.44
PMS1-213ENST00000441310 UNQ9165/PRO28630Q6UXU0 137 aa12.32□□□□□ -0.44
PMS1-213ENST00000441310 CITED2Q99967 270 aaPredicted RBP12.32□□□□□ -0.44
PMS1-213ENST00000441310 RPS28P62857 69 aaKnown RBP12.31□□□□□ -0.44
PMS1-213ENST00000441310 SDIM1Q6ZPB5 146 aa12.31□□□□□ -0.44
PMS1-213ENST00000441310 B4DSR2 109 aa12.31□□□□□ -0.44
PMS1-213ENST00000441310 BAALC-AS2P0C853 105 aa12.31□□□□□ -0.44
PMS1-213ENST00000441310 TIRAPP58753 221 aa12.31□□□□□ -0.44
PMS1-213ENST00000441310 C4orf26Q17RF5 130 aa12.31□□□□□ -0.44
PMS1-213ENST00000441310 ATOX1O00244 68 aa12.3□□□□□ -0.44
PMS1-213ENST00000441310 WIPF1O43516 503 aa12.3□□□□□ -0.44
PMS1-213ENST00000441310 ZNF843Q8N446 348 aa12.3□□□□□ -0.44
PMS1-213ENST00000441310 CXCL5P42830 114 aa12.3□□□□□ -0.44
PMS1-213ENST00000441310 DPH3Q96FX2 82 aa12.3□□□□□ -0.44
PMS1-213ENST00000441310 IGHV4-59P01825 116 aa12.29□□□□□ -0.44
PMS1-213ENST00000441310 HRCT1Q6UXD1 115 aa12.29□□□□□ -0.44
PMS1-213ENST00000441310 ZNF625Q96I27 306 aaPredicted RBP12.29□□□□□ -0.44
PMS1-213ENST00000441310 VSIG2Q96IQ7 327 aa12.29□□□□□ -0.44
PMS1-213ENST00000441310 PEMTQ9UBM1 199 aa12.29□□□□□ -0.44
PMS1-213ENST00000441310 COX7A2LO14548 114 aa12.29□□□□□ -0.44
PMS1-213ENST00000441310 FAM19A4Q96LR4 140 aa12.29□□□□□ -0.44
PMS1-213ENST00000441310 APCP25054 2843 aa12.29□□□□□ -0.44
PMS1-213ENST00000441310 OXTP01178 125 aa12.28□□□□□ -0.44
PMS1-213ENST00000441310 C10orf99Q6UWK7 81 aa12.28□□□□□ -0.44
PMS1-213ENST00000441310 MTORP42345 2549 aa12.28□□□□□ -0.44
PMS1-213ENST00000441310 IGKV3D-7A0A0C4DH55 119 aa12.28□□□□□ -0.44
PMS1-213ENST00000441310 SOCS3O14543 225 aa12.28□□□□□ -0.44
PMS1-213ENST00000441310 MRPS36P82909 103 aaKnown RBP12.28□□□□□ -0.44
PMS1-213ENST00000441310 DEFB112Q30KQ8 113 aa12.28□□□□□ -0.44
PMS1-213ENST00000441310 Q8N2B8 174 aa12.28□□□□□ -0.44
PMS1-213ENST00000441310 A6NDX4 124 aa12.27□□□□□ -0.44
PMS1-213ENST00000441310 NOTCH2Q04721 2471 aa12.27□□□□□ -0.45
PMS1-213ENST00000441310 F5H768 121 aa12.27□□□□□ -0.45
PMS1-213ENST00000441310 IGKV3-20P01619 116 aa12.26□□□□□ -0.45
PMS1-213ENST00000441310 RNF152Q8N8N0 203 aa12.26□□□□□ -0.45
PMS1-213ENST00000441310 IGHV3-73A0A0B4J1V6 119 aa12.25□□□□□ -0.45
PMS1-213ENST00000441310 APRG1Q8IVJ8 170 aa12.25□□□□□ -0.45
PMS1-213ENST00000441310 IGHG2P01859 326 aa12.25□□□□□ -0.45
PMS1-213ENST00000441310 EDN2P20800 178 aa12.25□□□□□ -0.45
PMS1-213ENST00000441310 FAM104AQ969W3 186 aa12.25□□□□□ -0.45
PMS1-213ENST00000441310 Q9HAA7 133 aa12.25□□□□□ -0.45
PMS1-213ENST00000441310 WNK1Q9H4A3 2382 aa12.25□□□□□ -0.45
PMS1-213ENST00000441310 NOTCH3Q9UM47 2321 aa12.25□□□□□ -0.45
PMS1-213ENST00000441310 NF1P21359 2839 aa12.24□□□□□ -0.45
PMS1-213ENST00000441310 TRAV12-2A0A075B6T6 113 aa12.24□□□□□ -0.45
PMS1-213ENST00000441310 A0A087WVE0 104 aa12.24□□□□□ -0.45
PMS1-213ENST00000441310 C19orf54Q5BKX5 351 aa12.24□□□□□ -0.45
PMS1-213ENST00000441310 ITPR3Q14573 2671 aa12.24□□□□□ -0.45
PMS1-213ENST00000441310 RPL18AQ02543 176 aaKnown RBP12.24□□□□□ -0.45
PMS1-213ENST00000441310 FLNAP21333 2647 aaKnown RBP12.24□□□□□ -0.45
PMS1-213ENST00000441310 HELZ2Q9BYK8 2649 aaKnown RBP12.24□□□□□ -0.45
PMS1-213ENST00000441310 HOXD3P31249 432 aaPredicted RBP12.23□□□□□ -0.45
PMS1-213ENST00000441310 HIST1H4AP62805 103 aaKnown RBP12.23□□□□□ -0.45
PMS1-213ENST00000441310 HIST2H2BCQ6DN03 193 aa12.23□□□□□ -0.45
PMS1-213ENST00000441310 KLK9Q9UKQ9 250 aa12.23□□□□□ -0.45
PMS1-213ENST00000441310 C22orf24Q9Y442 160 aa12.23□□□□□ -0.45
PMS1-213ENST00000441310 FAM223BA6NKX1 122 aa12.23□□□□□ -0.45
PMS1-213ENST00000441310 TMEM258P61165 79 aa12.23□□□□□ -0.45
PMS1-213ENST00000441310 FAM223AQ8IWN6 122 aa12.23□□□□□ -0.45
PMS1-213ENST00000441310 FAM218AQ96MZ4 157 aa12.23□□□□□ -0.45
PMS1-213ENST00000441310 KLLNB2CW77 178 aa12.22□□□□□ -0.45
PMS1-213ENST00000441310 LINC00308Q8TCZ7 52 aa12.22□□□□□ -0.45
PMS1-213ENST00000441310 CUBNO60494 3623 aa12.22□□□□□ -0.45
PMS1-213ENST00000441310 LINC01356Q8N9X3 169 aa12.22□□□□□ -0.45
PMS1-213ENST00000441310 NBPF19A0A087WUL8 3843 aa12.21□□□□□ -0.45
PMS1-213ENST00000441310 IGHV3-16A0A0C4DH30 117 aa12.21□□□□□ -0.45
PMS1-213ENST00000441310 INAFM2P0DMQ5 153 aa12.21□□□□□ -0.46
PMS1-213ENST00000441310 CIRBPQ14011 172 aaKnown RBP12.21□□□□□ -0.46
PMS1-213ENST00000441310 KLK9Q2XQG4 91 aa12.2□□□□□ -0.46
PMS1-213ENST00000441310 BEAN1Q3B7T3 259 aa12.2□□□□□ -0.46
PMS1-213ENST00000441310 CDKN2A-AS1Q9UH64 79 aa12.2□□□□□ -0.46
PMS1-213ENST00000441310 TENM4Q6N022 2769 aa12.19□□□□□ -0.46
PMS1-213ENST00000441310 ITPR2Q14571 2701 aa12.19□□□□□ -0.46
PMS1-213ENST00000441310 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.19□□□□□ -0.46
PMS1-213ENST00000441310 IGKV2-29A2NJV5 120 aaPredicted RBP12.19□□□□□ -0.46
PMS1-213ENST00000441310 PROK1P58294 105 aa12.19□□□□□ -0.46
PMS1-213ENST00000441310 HIST2H2BDQ6DRA6 164 aa12.19□□□□□ -0.46
PMS1-213ENST00000441310 SERP2Q8N6R1 65 aa12.19□□□□□ -0.46
PMS1-213ENST00000441310 C9orf85Q96MD7 179 aa12.19□□□□□ -0.46
PMS1-213ENST00000441310 ZNF469Q96JG9 3925 aaPredicted RBP12.19□□□□□ -0.46
PMS1-213ENST00000441310 TINCRA0A1B0GVN0 87 aa12.19□□□□□ -0.46
PMS1-213ENST00000441310 DNAL4O96015 105 aa12.19□□□□□ -0.46
PMS1-213ENST00000441310 Q9H8V8 135 aa12.19□□□□□ -0.46
PMS1-213ENST00000441310 RHPN1-AS1Q9BWJ2 59 aa12.18□□□□□ -0.46
PMS1-213ENST00000441310 TIMM17BO60830 172 aa12.18□□□□□ -0.46
PMS1-213ENST00000441310 DSCR9P59020 149 aa12.18□□□□□ -0.46
PMS1-213ENST00000441310 SOSTDC1Q6X4U4 206 aa12.18□□□□□ -0.46
PMS1-213ENST00000441310 PYGO1Q9Y3Y4 419 aa12.18□□□□□ -0.46
PMS1-213ENST00000441310 Q5XG85 94 aa12.18□□□□□ -0.46
PMS1-213ENST00000441310 A0A096LNT2 108 aa12.17□□□□□ -0.46
PMS1-213ENST00000441310 C14orf132Q9NPU4 83 aa12.17□□□□□ -0.46
PMS1-213ENST00000441310 UPK3BQ9BT76 320 aa12.17□□□□□ -0.46
PMS1-213ENST00000441310 HTN1P15515 57 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms