RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 SMIM2Q9BVW6 85 aa11.91□□□□□ -0.5
CPSF4-205ENST00000440514 MAP1LC3AQ9H492 121 aa11.91□□□□□ -0.5
CPSF4-205ENST00000440514 PGPEP1Q9NXJ5 209 aa11.91□□□□□ -0.5
CPSF4-205ENST00000440514 LRP1BQ9NZR2 4599 aa11.91□□□□□ -0.5
CPSF4-205ENST00000440514 PRSS47A8MTI9 375 aa11.9□□□□□ -0.5
CPSF4-205ENST00000440514 IGKV3OR2-268A0A0C4DH90 116 aa11.89□□□□□ -0.51
CPSF4-205ENST00000440514 DGAT2L7PQ6IED9 249 aa11.89□□□□□ -0.51
CPSF4-205ENST00000440514 KRTAP26-1Q6PEX3 210 aa11.89□□□□□ -0.51
CPSF4-205ENST00000440514 IGLV5-52A0A0A0MRZ9 124 aa11.88□□□□□ -0.51
CPSF4-205ENST00000440514 MRPL52Q86TS9 123 aaKnown RBP11.88□□□□□ -0.51
CPSF4-205ENST00000440514 OR5A1Q8NGJ0 315 aa11.88□□□□□ -0.51
CPSF4-205ENST00000440514 CSDC2Q9Y534 153 aaKnown RBP11.88□□□□□ -0.51
CPSF4-205ENST00000440514 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.87□□□□□ -0.51
CPSF4-205ENST00000440514 NTN5Q8WTR8 489 aaPredicted RBP11.87□□□□□ -0.51
CPSF4-205ENST00000440514 NXT2Q9NPJ8 142 aaKnown RBP11.87□□□□□ -0.51
CPSF4-205ENST00000440514 HERC2O95714 4834 aa11.87□□□□□ -0.51
CPSF4-205ENST00000440514 C14orf177Q52M58 125 aa11.86□□□□□ -0.51
CPSF4-205ENST00000440514 CCL25O15444 150 aa11.85□□□□□ -0.51
CPSF4-205ENST00000440514 KRTAP10-1P60331 282 aa11.85□□□□□ -0.51
CPSF4-205ENST00000440514 ORMDL2Q53FV1 153 aa11.85□□□□□ -0.51
CPSF4-205ENST00000440514 TIMM21Q9BVV7 248 aa11.85□□□□□ -0.51
CPSF4-205ENST00000440514 SMCO4Q9NRQ5 59 aa11.85□□□□□ -0.51
CPSF4-205ENST00000440514 LINC01549A6NIU2 74 aa11.84□□□□□ -0.51
CPSF4-205ENST00000440514 USP17L23D6RBM5 183 aa11.84□□□□□ -0.51
CPSF4-205ENST00000440514 SLC7A5P1Q8MH63 180 aa11.84□□□□□ -0.51
CPSF4-205ENST00000440514 Q8N8P6 123 aa11.84□□□□□ -0.51
CPSF4-205ENST00000440514 RYR1P21817 5038 aa11.83□□□□□ -0.52
CPSF4-205ENST00000440514 GCSHP23434 173 aa11.83□□□□□ -0.52
CPSF4-205ENST00000440514 UBE2D4Q9Y2X8 147 aa11.83□□□□□ -0.52
CPSF4-205ENST00000440514 LOC389332A0A1B0GUA5 103 aa11.82□□□□□ -0.52
CPSF4-205ENST00000440514 RPL39P62891 51 aaKnown RBP11.82□□□□□ -0.52
CPSF4-205ENST00000440514 FABP9Q0Z7S8 132 aa11.82□□□□□ -0.52
CPSF4-205ENST00000440514 KIAA1644Q3SXP7 199 aa11.82□□□□□ -0.52
CPSF4-205ENST00000440514 MRPL18Q9H0U6 180 aaKnown RBP11.82□□□□□ -0.52
CPSF4-205ENST00000440514 CDC42SE2Q9NRR3 84 aa11.82□□□□□ -0.52
CPSF4-205ENST00000440514 SPANXA1Q9NS26 97 aa11.82□□□□□ -0.52
CPSF4-205ENST00000440514 APOBP04114 4563 aaKnown RBP11.82□□□□□ -0.52
CPSF4-205ENST00000440514 GAGE12HA6NDE8 117 aa11.81□□□□□ -0.52
CPSF4-205ENST00000440514 CDK2AP2O75956 126 aa11.81□□□□□ -0.52
CPSF4-205ENST00000440514 RNASE13Q5GAN3 156 aaKnown RBP11.81□□□□□ -0.52
CPSF4-205ENST00000440514 ZNF664Q8N3J9 261 aa11.81□□□□□ -0.52
CPSF4-205ENST00000440514 CHCHD10Q8WYQ3 142 aaPredicted RBP11.81□□□□□ -0.52
CPSF4-205ENST00000440514 TRAPPC1Q9Y5R8 145 aa11.81□□□□□ -0.52
CPSF4-205ENST00000440514 Q6ZUT4 128 aa11.8□□□□□ -0.52
CPSF4-205ENST00000440514 PRSS3P2Q8NHM4 247 aa11.8□□□□□ -0.52
CPSF4-205ENST00000440514 NPSP0C0P6 89 aa11.79□□□□□ -0.52
CPSF4-205ENST00000440514 IFI27P40305 119 aaPredicted RBP11.79□□□□□ -0.52
CPSF4-205ENST00000440514 SS18Q15532 418 aa11.79□□□□□ -0.52
CPSF4-205ENST00000440514 LINC01620Q4KN68 170 aa11.79□□□□□ -0.52
CPSF4-205ENST00000440514 HSPG2P98160 4391 aa11.79□□□□□ -0.52
CPSF4-205ENST00000440514 TGIF2-C20orf24A0A0A6YYL0 155 aa11.78□□□□□ -0.52
CPSF4-205ENST00000440514 LINC00959A0A1B0GUT2 108 aa11.78□□□□□ -0.52
CPSF4-205ENST00000440514 PRSS1P07477 247 aa11.78□□□□□ -0.52
CPSF4-205ENST00000440514 CFAP161Q6P656 301 aa11.78□□□□□ -0.52
CPSF4-205ENST00000440514 ALKBH7Q9BT30 221 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-205ENST00000440514 CYSLTR1Q9Y271 337 aa11.78□□□□□ -0.52
CPSF4-205ENST00000440514 PYGO1Q9Y3Y4 419 aa11.78□□□□□ -0.52
CPSF4-205ENST00000440514 XCL1P47992 114 aa11.77□□□□□ -0.53
CPSF4-205ENST00000440514 MRPS36P82909 103 aaKnown RBP11.77□□□□□ -0.53
CPSF4-205ENST00000440514 PAPPA-AS1Q5QFB9 102 aa11.77□□□□□ -0.53
CPSF4-205ENST00000440514 C1orf196B1AJZ1 125 aa11.76□□□□□ -0.53
CPSF4-205ENST00000440514 RAB5BP61020 215 aa11.75□□□□□ -0.53
CPSF4-205ENST00000440514 HAMPP81172 84 aa11.75□□□□□ -0.53
CPSF4-205ENST00000440514 FOXI1Q12951 378 aa11.75□□□□□ -0.53
CPSF4-205ENST00000440514 C15orf56Q8N910 161 aa11.75□□□□□ -0.53
CPSF4-205ENST00000440514 FAM104AQ969W3 186 aa11.75□□□□□ -0.53
CPSF4-205ENST00000440514 OPRPNQ99935 248 aaPredicted RBP11.75□□□□□ -0.53
CPSF4-205ENST00000440514 Q6ZN92 141 aa11.74□□□□□ -0.53
CPSF4-205ENST00000440514 KRTAP17-1Q9BYP8 105 aa11.74□□□□□ -0.53
CPSF4-205ENST00000440514 hDV102S1A0JD36 115 aa11.73□□□□□ -0.53
CPSF4-205ENST00000440514 FA2HQ7L5A8 372 aa11.73□□□□□ -0.53
CPSF4-205ENST00000440514 TRAV13-1A0A0B4J241 112 aa11.72□□□□□ -0.53
CPSF4-205ENST00000440514 XGP55808 180 aa11.72□□□□□ -0.53
CPSF4-205ENST00000440514 C2orf66Q6UXQ4 117 aa11.72□□□□□ -0.53
CPSF4-205ENST00000440514 FAM30AQ9NZY2 134 aa11.72□□□□□ -0.53
CPSF4-205ENST00000440514 LINC01546A6NGU7 62 aa11.71□□□□□ -0.53
CPSF4-205ENST00000440514 HIGD2BQ4VC39 106 aa11.71□□□□□ -0.53
CPSF4-205ENST00000440514 CD164L2Q6UWJ8 174 aa11.71□□□□□ -0.53
CPSF4-205ENST00000440514 YPEL4Q96NS1 127 aa11.71□□□□□ -0.53
CPSF4-205ENST00000440514 C2orf88Q9BSF0 95 aa11.71□□□□□ -0.53
CPSF4-205ENST00000440514 CBLN2Q8IUK8 224 aa11.7□□□□□ -0.54
CPSF4-205ENST00000440514 TMEM141Q96I45 108 aa11.7□□□□□ -0.54
CPSF4-205ENST00000440514 AP5S1Q9NUS5 200 aa11.7□□□□□ -0.54
CPSF4-205ENST00000440514 IGLV4-3A0A075B6K6 122 aa11.69□□□□□ -0.54
CPSF4-205ENST00000440514 IFITM10A6NMD0 228 aa11.69□□□□□ -0.54
CPSF4-205ENST00000440514 TEX43Q6ZNM6 134 aa11.69□□□□□ -0.54
CPSF4-205ENST00000440514 DNAH8Q96JB1 4490 aa11.69□□□□□ -0.54
CPSF4-205ENST00000440514 TOMM6Q96B49 74 aa11.68□□□□□ -0.54
CPSF4-205ENST00000440514 TIMM17AQ99595 171 aa11.68□□□□□ -0.54
CPSF4-205ENST00000440514 VCX2Q9H322 139 aa11.68□□□□□ -0.54
CPSF4-205ENST00000440514 GVQW2A0A096LPI5 108 aaPredicted RBP11.67□□□□□ -0.54
CPSF4-205ENST00000440514 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.67□□□□□ -0.54
CPSF4-205ENST00000440514 APOMO95445 188 aa11.67□□□□□ -0.54
CPSF4-205ENST00000440514 SLPIP03973 132 aa11.67□□□□□ -0.54
CPSF4-205ENST00000440514 LINC00614P0C842 121 aa11.67□□□□□ -0.54
CPSF4-205ENST00000440514 CNBPP62633 177 aaKnown RBP11.67□□□□□ -0.54
CPSF4-205ENST00000440514 SEC11AP67812 179 aa11.67□□□□□ -0.54
CPSF4-205ENST00000440514 Q6ZSA8 131 aa11.67□□□□□ -0.54
CPSF4-205ENST00000440514 ERASQ7Z444 233 aa11.67□□□□□ -0.54
CPSF4-205ENST00000440514 MALP21145 153 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms