RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 UBE2WQ96B02 151 aa13.32□□□□□ -0.28
PTPRJ-202ENST00000440289 HIVEP2P31629 2446 aa13.32□□□□□ -0.28
PTPRJ-202ENST00000440289 RBMY1BA6NDE4 496 aaKnown RBP13.32□□□□□ -0.28
PTPRJ-202ENST00000440289 RBMY1EA6NEQ0 496 aaKnown RBP13.32□□□□□ -0.28
PTPRJ-202ENST00000440289 RBMY1DP0C7P1 496 aaKnown RBP13.32□□□□□ -0.28
PTPRJ-202ENST00000440289 Q9H8V8 135 aa13.32□□□□□ -0.28
PTPRJ-202ENST00000440289 TRBV7-9A0A0J9YWB2 115 aa13.31□□□□□ -0.28
PTPRJ-202ENST00000440289 IGHV1-58A0A0C4DH39 117 aa13.31□□□□□ -0.28
PTPRJ-202ENST00000440289 GAGE12JA6NER3 117 aa13.3□□□□□ -0.28
PTPRJ-202ENST00000440289 GAGE4Q13068 117 aa13.3□□□□□ -0.28
PTPRJ-202ENST00000440289 GAGE5Q13069 117 aa13.3□□□□□ -0.28
PTPRJ-202ENST00000440289 TMEM262E9PQX1 116 aa13.29□□□□□ -0.28
PTPRJ-202ENST00000440289 COX6A2Q02221 97 aa13.29□□□□□ -0.28
PTPRJ-202ENST00000440289 RPL32P62910 135 aaKnown RBP13.29□□□□□ -0.28
PTPRJ-202ENST00000440289 C11orf68Q9H3H3 251 aaKnown RBP13.29□□□□□ -0.28
PTPRJ-202ENST00000440289 RS1O15537 224 aa13.28□□□□□ -0.28
PTPRJ-202ENST00000440289 VSIG2Q96IQ7 327 aa13.28□□□□□ -0.28
PTPRJ-202ENST00000440289 SETXQ7Z333 2677 aaKnown RBP13.28□□□□□ -0.28
PTPRJ-202ENST00000440289 A0A0B4J2C4 111 aa13.28□□□□□ -0.28
PTPRJ-202ENST00000440289 ZNF415Q09FC8 603 aa13.28□□□□□ -0.28
PTPRJ-202ENST00000440289 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.28□□□□□ -0.28
PTPRJ-202ENST00000440289 LINC00694P0DN24 101 aa13.26□□□□□ -0.29
PTPRJ-202ENST00000440289 PRIMA1Q86XR5 153 aa13.26□□□□□ -0.29
PTPRJ-202ENST00000440289 UBE2D4Q9Y2X8 147 aa13.26□□□□□ -0.29
PTPRJ-202ENST00000440289 KRTAP10-9P60411 292 aa13.26□□□□□ -0.29
PTPRJ-202ENST00000440289 H7C423 109 aa13.26□□□□□ -0.29
PTPRJ-202ENST00000440289 LINC01356Q8N9X3 169 aa13.26□□□□□ -0.29
PTPRJ-202ENST00000440289 VPREB3Q9UKI3 123 aa13.26□□□□□ -0.29
PTPRJ-202ENST00000440289 CHCHD7Q9BUK0 85 aa13.25□□□□□ -0.29
PTPRJ-202ENST00000440289 TRBV10-2A0A0K0K1G8 114 aa13.24□□□□□ -0.29
PTPRJ-202ENST00000440289 MRPS36P82909 103 aaKnown RBP13.24□□□□□ -0.29
PTPRJ-202ENST00000440289 PIK3CD-AS1Q5SR53 167 aa13.24□□□□□ -0.29
PTPRJ-202ENST00000440289 GCN1Q92616 2671 aaKnown RBP13.24□□□□□ -0.29
PTPRJ-202ENST00000440289 TENM4Q6N022 2769 aa13.24□□□□□ -0.29
PTPRJ-202ENST00000440289 CCDC179H3BU77 68 aa13.24□□□□□ -0.29
PTPRJ-202ENST00000440289 PLA2G2AP14555 144 aa13.24□□□□□ -0.29
PTPRJ-202ENST00000440289 MIAQ16674 131 aa13.24□□□□□ -0.29
PTPRJ-202ENST00000440289 FAM104AQ969W3 186 aa13.24□□□□□ -0.29
PTPRJ-202ENST00000440289 HIST2H2BCQ6DN03 193 aa13.24□□□□□ -0.29
PTPRJ-202ENST00000440289 LITAFQ99732 161 aa13.24□□□□□ -0.29
PTPRJ-202ENST00000440289 HECTD1Q9ULT8 2610 aa13.23□□□□□ -0.29
PTPRJ-202ENST00000440289 CIRBPQ14011 172 aaKnown RBP13.23□□□□□ -0.29
PTPRJ-202ENST00000440289 TMEM101Q96IK0 257 aa13.23□□□□□ -0.29
PTPRJ-202ENST00000440289 WFDC10AQ9H1F0 79 aa13.23□□□□□ -0.29
PTPRJ-202ENST00000440289 RPL35AP18077 110 aaKnown RBP13.22□□□□□ -0.29
PTPRJ-202ENST00000440289 STHQ8IWL8 128 aa13.22□□□□□ -0.29
PTPRJ-202ENST00000440289 BBC3Q96PG8 261 aaPredicted RBP13.22□□□□□ -0.29
PTPRJ-202ENST00000440289 MAP6D1Q9H9H5 199 aa13.22□□□□□ -0.29
PTPRJ-202ENST00000440289 HELZ2Q9BYK8 2649 aaKnown RBP13.22□□□□□ -0.29
PTPRJ-202ENST00000440289 Q6ZTI0 123 aa13.22□□□□□ -0.29
PTPRJ-202ENST00000440289 ZNF702PQ9H963 129 aa13.21□□□□□ -0.29
PTPRJ-202ENST00000440289 Q9HAA7 133 aa13.21□□□□□ -0.3
PTPRJ-202ENST00000440289 Q8N2B8 174 aa13.2□□□□□ -0.3
PTPRJ-202ENST00000440289 SBSPONQ8IVN8 264 aa13.2□□□□□ -0.3
PTPRJ-202ENST00000440289 NOP10Q9NPE3 64 aaKnown RBP13.2□□□□□ -0.3
PTPRJ-202ENST00000440289 LOC100131303A0A0U1RQF7 123 aa13.19□□□□□ -0.3
PTPRJ-202ENST00000440289 INSP01308 110 aa13.19□□□□□ -0.3
PTPRJ-202ENST00000440289 IFITM1P13164 125 aa13.19□□□□□ -0.3
PTPRJ-202ENST00000440289 NDUFV3P56181 108 aaKnown RBP13.19□□□□□ -0.3
PTPRJ-202ENST00000440289 TRGV2A0A075B6R0 118 aa13.19□□□□□ -0.3
PTPRJ-202ENST00000440289 CHCHD5Q9BSY4 110 aa13.19□□□□□ -0.3
PTPRJ-202ENST00000440289 TRBV30A0A0K0K1B3 111 aa13.18□□□□□ -0.3
PTPRJ-202ENST00000440289 GAGE7O76087 117 aa13.18□□□□□ -0.3
PTPRJ-202ENST00000440289 GAGE12FP0CL80 117 aa13.18□□□□□ -0.3
PTPRJ-202ENST00000440289 GAGE12GP0CL81 117 aa13.18□□□□□ -0.3
PTPRJ-202ENST00000440289 GAGE12IP0CL82 117 aa13.18□□□□□ -0.3
PTPRJ-202ENST00000440289 ODF3Q96PU9 254 aa13.18□□□□□ -0.3
PTPRJ-202ENST00000440289 TINCRA0A1B0GVN0 87 aa13.18□□□□□ -0.3
PTPRJ-202ENST00000440289 UBE2L6O14933 153 aa13.18□□□□□ -0.3
PTPRJ-202ENST00000440289 FASNP49327 2511 aaKnown RBP13.17□□□□□ -0.3
PTPRJ-202ENST00000440289 UBR5O95071 2799 aaPredicted RBP13.17□□□□□ -0.3
PTPRJ-202ENST00000440289 BRI3O95415 125 aa13.17□□□□□ -0.3
PTPRJ-202ENST00000440289 SPANXA1Q9NS26 97 aa13.17□□□□□ -0.3
PTPRJ-202ENST00000440289 PFN2P35080 140 aa13.16□□□□□ -0.3
PTPRJ-202ENST00000440289 GAGE6Q13070 117 aa13.16□□□□□ -0.3
PTPRJ-202ENST00000440289 LINC00308Q8TCZ7 52 aa13.16□□□□□ -0.3
PTPRJ-202ENST00000440289 PEMTQ9UBM1 199 aa13.16□□□□□ -0.3
PTPRJ-202ENST00000440289 PYGO1Q9Y3Y4 419 aa13.16□□□□□ -0.3
PTPRJ-202ENST00000440289 YAE1D1Q9NRH1 226 aa13.15□□□□□ -0.3
PTPRJ-202ENST00000440289 CLPSL2Q6UWE3 100 aa13.15□□□□□ -0.3
PTPRJ-202ENST00000440289 TMEM89A2RUT3 159 aa13.14□□□□□ -0.31
PTPRJ-202ENST00000440289 LINC00242Q5T6M2 205 aa13.14□□□□□ -0.31
PTPRJ-202ENST00000440289 A0A096LPF7 62 aa13.14□□□□□ -0.31
PTPRJ-202ENST00000440289 RPL36AP83881 106 aaKnown RBP13.14□□□□□ -0.31
PTPRJ-202ENST00000440289 RPL36ALQ969Q0 106 aaKnown RBP13.14□□□□□ -0.31
PTPRJ-202ENST00000440289 NHLRC4P0CG21 123 aaPredicted RBP13.14□□□□□ -0.31
PTPRJ-202ENST00000440289 OR13C6PQ8NH95 151 aa13.14□□□□□ -0.31
PTPRJ-202ENST00000440289 SOSTDC1Q6X4U4 206 aa13.13□□□□□ -0.31
PTPRJ-202ENST00000440289 VWFP04275 2813 aa13.13□□□□□ -0.31
PTPRJ-202ENST00000440289 CITED2Q99967 270 aaPredicted RBP13.13□□□□□ -0.31
PTPRJ-202ENST00000440289 LINC00158P58513 81 aa13.12□□□□□ -0.31
PTPRJ-202ENST00000440289 CITED1Q99966 193 aa13.12□□□□□ -0.31
PTPRJ-202ENST00000440289 LST1O00453 97 aa13.12□□□□□ -0.31
PTPRJ-202ENST00000440289 Q96MF0 132 aa13.12□□□□□ -0.31
PTPRJ-202ENST00000440289 GAGE2AQ6NT46 116 aa13.11□□□□□ -0.31
PTPRJ-202ENST00000440289 DEFB114Q30KQ6 69 aa13.11□□□□□ -0.31
PTPRJ-202ENST00000440289 C5orf38Q86SI9 138 aa13.11□□□□□ -0.31
PTPRJ-202ENST00000440289 C11orf72Q8NBR9 251 aa13.11□□□□□ -0.31
PTPRJ-202ENST00000440289 SPANXDQ9BXN6 97 aa13.11□□□□□ -0.31
PTPRJ-202ENST00000440289 SPANXCQ9NY87 97 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms