RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 MIFP14174 115 aa10.63□□□□□ -0.71
CPSF7-205ENST00000439958 OR5A1Q8NGJ0 315 aa10.63□□□□□ -0.71
CPSF7-205ENST00000439958 C2orf88Q9BSF0 95 aa10.63□□□□□ -0.71
CPSF7-205ENST00000439958 PRO0255Q9UI72 69 aa10.63□□□□□ -0.71
CPSF7-205ENST00000439958 ATP5G1P05496 136 aa10.63□□□□□ -0.71
CPSF7-205ENST00000439958 UBE2D4Q9Y2X8 147 aa10.63□□□□□ -0.71
CPSF7-205ENST00000439958 Q8NAQ8 132 aa10.62□□□□□ -0.71
CPSF7-205ENST00000439958 ATP6V0E2Q8NHE4 81 aa10.62□□□□□ -0.71
CPSF7-205ENST00000439958 LINC01549A6NIU2 74 aa10.62□□□□□ -0.71
CPSF7-205ENST00000439958 ZNF815PA8K554 130 aa10.62□□□□□ -0.71
CPSF7-205ENST00000439958 GCSHP23434 173 aa10.62□□□□□ -0.71
CPSF7-205ENST00000439958 Q6ZVH6 145 aa10.62□□□□□ -0.71
CPSF7-205ENST00000439958 TMEM101Q96IK0 257 aa10.62□□□□□ -0.71
CPSF7-205ENST00000439958 LYRM9A8MSI8 78 aa10.62□□□□□ -0.71
CPSF7-205ENST00000439958 IGLV4-69A0A075B6H9 119 aa10.61□□□□□ -0.71
CPSF7-205ENST00000439958 MAPKAPK5-AS1Q8N8E1 139 aa10.61□□□□□ -0.71
CPSF7-205ENST00000439958 CRYBA4P53673 196 aa10.6□□□□□ -0.71
CPSF7-205ENST00000439958 PTTG1IPP53801 180 aa10.6□□□□□ -0.71
CPSF7-205ENST00000439958 EDA2RQ9HAV5 297 aa10.6□□□□□ -0.71
CPSF7-205ENST00000439958 TRAV8-3A0A0A6YYJ7 113 aa10.59□□□□□ -0.71
CPSF7-205ENST00000439958 SPANXA1Q9NS26 97 aa10.59□□□□□ -0.71
CPSF7-205ENST00000439958 WIPF1O43516 503 aa10.59□□□□□ -0.71
CPSF7-205ENST00000439958 SPINK8P0C7L1 97 aa10.59□□□□□ -0.71
CPSF7-205ENST00000439958 LGALS3P17931 250 aaKnown RBP10.59□□□□□ -0.71
CPSF7-205ENST00000439958 MRPS16Q9Y3D3 137 aaKnown RBP10.59□□□□□ -0.71
CPSF7-205ENST00000439958 STAB2Q8WWQ8 2551 aa10.58□□□□□ -0.72
CPSF7-205ENST00000439958 A0A0J9YWU9 116 aa10.58□□□□□ -0.72
CPSF7-205ENST00000439958 A8MZ25 164 aa10.58□□□□□ -0.72
CPSF7-205ENST00000439958 BOD1L2Q8IYS8 172 aa10.58□□□□□ -0.72
CPSF7-205ENST00000439958 SBSPONQ8IVN8 264 aa10.58□□□□□ -0.72
CPSF7-205ENST00000439958 VSIG2Q96IQ7 327 aa10.58□□□□□ -0.72
CPSF7-205ENST00000439958 C2orf91Q6ZV80 131 aa10.58□□□□□ -0.72
CPSF7-205ENST00000439958 HIST1H4GQ99525 98 aa10.58□□□□□ -0.72
CPSF7-205ENST00000439958 TRBV6-8A0A0A6YYG3 113 aa10.57□□□□□ -0.72
CPSF7-205ENST00000439958 RAB37Q96AX2 223 aa10.57□□□□□ -0.72
CPSF7-205ENST00000439958 SRSF9Q13242 221 aaKnown RBP eCLIP10.57□□□□□ -0.72
CPSF7-205ENST00000439958 COL5A1-AS1Q5SY13 56 aa10.57□□□□□ -0.72
CPSF7-205ENST00000439958 EGFEM1PQ0D2K5 195 aa10.57□□□□□ -0.72
CPSF7-205ENST00000439958 K7EP13 123 aa10.56□□□□□ -0.72
CPSF7-205ENST00000439958 Q6ZTC4 211 aa10.56□□□□□ -0.72
CPSF7-205ENST00000439958 NANOS2P60321 138 aaKnown RBP10.56□□□□□ -0.72
CPSF7-205ENST00000439958 NAA38Q9BRA0 125 aaKnown RBP10.56□□□□□ -0.72
CPSF7-205ENST00000439958 ZNF22P17026 224 aaPredicted RBP10.55□□□□□ -0.72
CPSF7-205ENST00000439958 TIMM21Q9BVV7 248 aa10.55□□□□□ -0.72
CPSF7-205ENST00000439958 A0A0U1RRA0 63 aa10.55□□□□□ -0.72
CPSF7-205ENST00000439958 PYGO1Q9Y3Y4 419 aa10.55□□□□□ -0.72
CPSF7-205ENST00000439958 IGLV4-60A0A075B6I1 120 aa10.55□□□□□ -0.72
CPSF7-205ENST00000439958 ZNF625Q96I27 306 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-205ENST00000439958 TOMM7Q9P0U1 55 aa10.54□□□□□ -0.72
CPSF7-205ENST00000439958 CDKN2A-AS1Q9UH64 79 aa10.54□□□□□ -0.72
CPSF7-205ENST00000439958 ANK2Q01484 3957 aa10.54□□□□□ -0.72
CPSF7-205ENST00000439958 MYMXA0A1B0GTQ4 84 aa10.54□□□□□ -0.72
CPSF7-205ENST00000439958 E9PLD3 99 aa10.54□□□□□ -0.72
CPSF7-205ENST00000439958 CIDEAO60543 219 aa10.54□□□□□ -0.72
CPSF7-205ENST00000439958 J3QQQ9 107 aa10.54□□□□□ -0.72
CPSF7-205ENST00000439958 Q8N3U1 123 aa10.54□□□□□ -0.72
CPSF7-205ENST00000439958 TSPEAR-AS2P59090 65 aa10.53□□□□□ -0.72
CPSF7-205ENST00000439958 BVES-AS1Q5T3Y7 98 aa10.53□□□□□ -0.72
CPSF7-205ENST00000439958 SAMD5Q5TGI4 173 aa10.53□□□□□ -0.72
CPSF7-205ENST00000439958 PLEKHB2Q96CS7 222 aa10.53□□□□□ -0.72
CPSF7-205ENST00000439958 IGLV10-54A0A075B6I4 117 aa10.53□□□□□ -0.72
CPSF7-205ENST00000439958 C12orf74Q32Q52 190 aa10.53□□□□□ -0.72
CPSF7-205ENST00000439958 C11orf68Q9H3H3 251 aaKnown RBP10.53□□□□□ -0.72
CPSF7-205ENST00000439958 COX6A2Q02221 97 aa10.52□□□□□ -0.73
CPSF7-205ENST00000439958 FAM104AQ969W3 186 aa10.52□□□□□ -0.73
CPSF7-205ENST00000439958 AMELXQ99217 191 aa10.52□□□□□ -0.73
CPSF7-205ENST00000439958 NPC2P61916 151 aa10.51□□□□□ -0.73
CPSF7-205ENST00000439958 C11orf45Q8TAV5 145 aa10.51□□□□□ -0.73
CPSF7-205ENST00000439958 K7EIL1 84 aa10.51□□□□□ -0.73
CPSF7-205ENST00000439958 ANGP03950 147 aaKnown RBP10.51□□□□□ -0.73
CPSF7-205ENST00000439958 SMAGPQ0VAQ4 97 aa10.51□□□□□ -0.73
CPSF7-205ENST00000439958 LINC00612Q8N6U2 182 aa10.51□□□□□ -0.73
CPSF7-205ENST00000439958 PRSS2P07478 247 aa10.51□□□□□ -0.73
CPSF7-205ENST00000439958 XCL1P47992 114 aa10.51□□□□□ -0.73
CPSF7-205ENST00000439958 CDC42SE2Q9NRR3 84 aa10.51□□□□□ -0.73
CPSF7-205ENST00000439958 MRPL23Q16540 153 aaKnown RBP10.5□□□□□ -0.73
CPSF7-205ENST00000439958 GTSF1LQ9H1H1 148 aa10.5□□□□□ -0.73
CPSF7-205ENST00000439958 NHP2Q9NX24 153 aaKnown RBP10.5□□□□□ -0.73
CPSF7-205ENST00000439958 HSD52Q0P140 79 aa10.5□□□□□ -0.73
CPSF7-205ENST00000439958 ICOSQ9Y6W8 199 aa10.5□□□□□ -0.73
CPSF7-205ENST00000439958 C5orf38Q86SI9 138 aa10.5□□□□□ -0.73
CPSF7-205ENST00000439958 K7ERJ3 54 aa10.49□□□□□ -0.73
CPSF7-205ENST00000439958 IGHV3-30-3P0DP02 117 aa10.49□□□□□ -0.73
CPSF7-205ENST00000439958 UBE2D1P51668 147 aa10.49□□□□□ -0.73
CPSF7-205ENST00000439958 TMEM223A0PJW6 202 aa10.49□□□□□ -0.73
CPSF7-205ENST00000439958 H3BRM9 83 aa10.49□□□□□ -0.73
CPSF7-205ENST00000439958 NFE4Q86UQ8 179 aa10.49□□□□□ -0.73
CPSF7-205ENST00000439958 ORAOV1Q8WV07 137 aa10.49□□□□□ -0.73
CPSF7-205ENST00000439958 FXYD2P54710 66 aa10.49□□□□□ -0.73
CPSF7-205ENST00000439958 LBHQ53QV2 105 aaPredicted RBP10.49□□□□□ -0.73
CPSF7-205ENST00000439958 RBX1P62877 108 aa10.48□□□□□ -0.73
CPSF7-205ENST00000439958 MRPS36P82909 103 aaKnown RBP10.48□□□□□ -0.73
CPSF7-205ENST00000439958 LINC00242Q5T6M2 205 aa10.48□□□□□ -0.73
CPSF7-205ENST00000439958 DEFB131BA0A096LNP1 70 aa10.47□□□□□ -0.73
CPSF7-205ENST00000439958 IGHV3-30P01768 117 aa10.47□□□□□ -0.73
CPSF7-205ENST00000439958 IGHV3-33P01772 117 aa10.47□□□□□ -0.73
CPSF7-205ENST00000439958 IGHV3-30-5P0DP03 117 aa10.47□□□□□ -0.73
CPSF7-205ENST00000439958 VAMP3Q15836 100 aa10.47□□□□□ -0.73
CPSF7-205ENST00000439958 KPRPQ5T749 579 aaPredicted RBP10.47□□□□□ -0.73
CPSF7-205ENST00000439958 LINC00269Q8N2A0 174 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms