RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 DGAT2L7PQ6IED9 249 aa8.31□□□□□ -1.08
SMAD3-202ENST00000439724 PLEKHB2Q96CS7 222 aa8.31□□□□□ -1.08
SMAD3-202ENST00000439724 TMEM243Q9BU79 118 aa8.31□□□□□ -1.08
SMAD3-202ENST00000439724 LGALS3P17931 250 aaKnown RBP8.3□□□□□ -1.08
SMAD3-202ENST00000439724 HIST1H4GQ99525 98 aa8.3□□□□□ -1.08
SMAD3-202ENST00000439724 IGHV4-30-4P0DP06 118 aa8.29□□□□□ -1.08
SMAD3-202ENST00000439724 MIFP14174 115 aa8.29□□□□□ -1.08
SMAD3-202ENST00000439724 TIRAPP58753 221 aa8.29□□□□□ -1.08
SMAD3-202ENST00000439724 FAM222AQ5U5X8 452 aa8.29□□□□□ -1.08
SMAD3-202ENST00000439724 SHISA2Q6UWI4 295 aa8.29□□□□□ -1.08
SMAD3-202ENST00000439724 SCGB1D4Q6XE38 83 aa8.29□□□□□ -1.08
SMAD3-202ENST00000439724 FAM19A3Q7Z5A8 133 aa8.29□□□□□ -1.08
SMAD3-202ENST00000439724 TEP1Q99973 2627 aaKnown RBP8.29□□□□□ -1.08
SMAD3-202ENST00000439724 IGLV5-45A0A087WSX0 123 aa8.29□□□□□ -1.08
SMAD3-202ENST00000439724 IGHV4-28A0A0C4DH34 117 aa8.29□□□□□ -1.08
SMAD3-202ENST00000439724 A0A0J9YY99 117 aa8.29□□□□□ -1.08
SMAD3-202ENST00000439724 C3orf56Q8N813 242 aa8.29□□□□□ -1.08
SMAD3-202ENST00000439724 OR5A1Q8NGJ0 315 aa8.29□□□□□ -1.08
SMAD3-202ENST00000439724 RNF183Q96D59 192 aa8.29□□□□□ -1.08
SMAD3-202ENST00000439724 SPANXB1Q9NS25 103 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-202ENST00000439724 C9orf118A6NHY6 69 aa8.28□□□□□ -1.08
SMAD3-202ENST00000439724 K7EP13 123 aa8.28□□□□□ -1.08
SMAD3-202ENST00000439724 UBE2L6O14933 153 aa8.28□□□□□ -1.08
SMAD3-202ENST00000439724 PTTG1IPP53801 180 aa8.28□□□□□ -1.08
SMAD3-202ENST00000439724 Q8NAQ8 132 aa8.28□□□□□ -1.08
SMAD3-202ENST00000439724 GEMIN7Q9H840 131 aaKnown RBP8.28□□□□□ -1.08
SMAD3-202ENST00000439724 PRO0255Q9UI72 69 aa8.28□□□□□ -1.08
SMAD3-202ENST00000439724 ATRQ13535 2644 aa8.27□□□□□ -1.09
SMAD3-202ENST00000439724 TRBV6-8A0A0A6YYG3 113 aa8.27□□□□□ -1.09
SMAD3-202ENST00000439724 IGHV1-58A0A0C4DH39 117 aa8.27□□□□□ -1.09
SMAD3-202ENST00000439724 SMIM13P0DJ93 91 aa8.27□□□□□ -1.09
SMAD3-202ENST00000439724 IGHV3-30-3P0DP02 117 aa8.27□□□□□ -1.09
SMAD3-202ENST00000439724 EGFEM1PQ0D2K5 195 aa8.27□□□□□ -1.09
SMAD3-202ENST00000439724 AMMECR1LQ6DCA0 310 aa8.27□□□□□ -1.09
SMAD3-202ENST00000439724 CDC42SE2Q9NRR3 84 aa8.27□□□□□ -1.09
SMAD3-202ENST00000439724 NIPBLQ6KC79 2804 aaeCLIP8.27□□□□□ -1.09
SMAD3-202ENST00000439724 IGHV3-64A0A075B6Q5 118 aa8.26□□□□□ -1.09
SMAD3-202ENST00000439724 A8MZ25 164 aa8.26□□□□□ -1.09
SMAD3-202ENST00000439724 HERVK_113P63121 156 aa8.26□□□□□ -1.09
SMAD3-202ENST00000439724 UBE2V1Q13404 147 aa8.26□□□□□ -1.09
SMAD3-202ENST00000439724 VAMP3Q15836 100 aa8.26□□□□□ -1.09
SMAD3-202ENST00000439724 OXLD1Q5BKU9 147 aa8.26□□□□□ -1.09
SMAD3-202ENST00000439724 TMEM101Q96IK0 257 aa8.26□□□□□ -1.09
SMAD3-202ENST00000439724 TENM1Q9UKZ4 2725 aa8.26□□□□□ -1.09
SMAD3-202ENST00000439724 CYSRT1A8MQ03 144 aa8.25□□□□□ -1.09
SMAD3-202ENST00000439724 GYPEP15421 78 aa8.25□□□□□ -1.09
SMAD3-202ENST00000439724 LINC00242Q5T6M2 205 aa8.25□□□□□ -1.09
SMAD3-202ENST00000439724 PRIMA1Q86XR5 153 aa8.25□□□□□ -1.09
SMAD3-202ENST00000439724 VSIG2Q96IQ7 327 aa8.25□□□□□ -1.09
SMAD3-202ENST00000439724 NHP2Q9NX24 153 aaKnown RBP8.25□□□□□ -1.09
SMAD3-202ENST00000439724 TRAV8-3A0A0A6YYJ7 113 aa8.24□□□□□ -1.09
SMAD3-202ENST00000439724 A0A1B0GWB2 263 aa8.24□□□□□ -1.09
SMAD3-202ENST00000439724 KRTAP10-11P60412 298 aa8.24□□□□□ -1.09
SMAD3-202ENST00000439724 DAD1P61803 113 aa8.24□□□□□ -1.09
SMAD3-202ENST00000439724 SRSF9Q13242 221 aaKnown RBP eCLIP8.24□□□□□ -1.09
SMAD3-202ENST00000439724 ATP6V0E2Q8NHE4 81 aa8.24□□□□□ -1.09
SMAD3-202ENST00000439724 CDKN2A-AS1Q9UH64 79 aa8.24□□□□□ -1.09
SMAD3-202ENST00000439724 FLNBO75369 2602 aaKnown RBP8.24□□□□□ -1.09
SMAD3-202ENST00000439724 TMEM238LA0A1B0GVL6 79 aa8.24□□□□□ -1.09
SMAD3-202ENST00000439724 A6NJY4 79 aa8.24□□□□□ -1.09
SMAD3-202ENST00000439724 DEFB4AO15263 64 aa8.24□□□□□ -1.09
SMAD3-202ENST00000439724 SPINK8P0C7L1 97 aa8.24□□□□□ -1.09
SMAD3-202ENST00000439724 C12orf74Q32Q52 190 aa8.24□□□□□ -1.09
SMAD3-202ENST00000439724 RAB37Q96AX2 223 aa8.24□□□□□ -1.09
SMAD3-202ENST00000439724 VWFP04275 2813 aa8.23□□□□□ -1.09
SMAD3-202ENST00000439724 H3BUT2 72 aa8.23□□□□□ -1.09
SMAD3-202ENST00000439724 K7ERJ3 54 aa8.23□□□□□ -1.09
SMAD3-202ENST00000439724 CCL25O15444 150 aa8.23□□□□□ -1.09
SMAD3-202ENST00000439724 PAX4O43316 350 aa8.23□□□□□ -1.09
SMAD3-202ENST00000439724 ATP5G1P05496 136 aa8.23□□□□□ -1.09
SMAD3-202ENST00000439724 SPART-AS1P0CW21 52 aa8.23□□□□□ -1.09
SMAD3-202ENST00000439724 COX6A2Q02221 97 aa8.23□□□□□ -1.09
SMAD3-202ENST00000439724 GAGE6Q13070 117 aa8.23□□□□□ -1.09
SMAD3-202ENST00000439724 C10orf126Q8N4M7 172 aa8.23□□□□□ -1.09
SMAD3-202ENST00000439724 CHCHD5Q9BSY4 110 aa8.23□□□□□ -1.09
SMAD3-202ENST00000439724 CELA1Q9UNI1 258 aa8.23□□□□□ -1.09
SMAD3-202ENST00000439724 TRAV13-1A0A0B4J241 112 aa8.22□□□□□ -1.09
SMAD3-202ENST00000439724 IGLV5-39A0A0G2JS06 123 aa8.22□□□□□ -1.09
SMAD3-202ENST00000439724 A0A0J9YXY3 114 aa8.22□□□□□ -1.09
SMAD3-202ENST00000439724 TEX48A0A1B0GUV7 120 aa8.22□□□□□ -1.09
SMAD3-202ENST00000439724 IGHV3-30P01768 117 aa8.22□□□□□ -1.09
SMAD3-202ENST00000439724 IGHV3-30-5P0DP03 117 aa8.22□□□□□ -1.09
SMAD3-202ENST00000439724 ZFAND6Q6FIF0 208 aa8.22□□□□□ -1.09
SMAD3-202ENST00000439724 NDUFA12Q9UI09 145 aa8.22□□□□□ -1.09
SMAD3-202ENST00000439724 TMEM238C9JI98 176 aa8.21□□□□□ -1.1
SMAD3-202ENST00000439724 TRAV26-1A0A087WT03 109 aa8.2□□□□□ -1.1
SMAD3-202ENST00000439724 A0A1W2PPM0 123 aa8.2□□□□□ -1.1
SMAD3-202ENST00000439724 IGLV4-60A0A075B6I1 120 aa8.19□□□□□ -1.1
SMAD3-202ENST00000439724 SMIM1B2RUZ4 78 aa8.19□□□□□ -1.1
SMAD3-202ENST00000439724 IGLL5B9A064 214 aa8.19□□□□□ -1.1
SMAD3-202ENST00000439724 F5H768 121 aa8.19□□□□□ -1.1
SMAD3-202ENST00000439724 SAMD5Q5TGI4 173 aa8.19□□□□□ -1.1
SMAD3-202ENST00000439724 NAA38Q9BRA0 125 aaKnown RBP8.19□□□□□ -1.1
SMAD3-202ENST00000439724 A0A1B0GUV1 79 aa8.19□□□□□ -1.1
SMAD3-202ENST00000439724 K7EP34 96 aa8.19□□□□□ -1.1
SMAD3-202ENST00000439724 NDUFA1O15239 70 aa8.19□□□□□ -1.1
SMAD3-202ENST00000439724 GTF2H5Q6ZYL4 71 aa8.19□□□□□ -1.1
SMAD3-202ENST00000439724 LITAFQ99732 161 aa8.19□□□□□ -1.1
SMAD3-202ENST00000439724 GAGE10A6NGK3 116 aa8.18□□□□□ -1.1
SMAD3-202ENST00000439724 TIMM17BO60830 172 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms