RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 RNASEKQ6P5S7 137 aaKnown RBP7.17□□□□□ -1.26
HLA-DMB-259ENST00000438510 BAGE3Q86Y29 109 aa7.17□□□□□ -1.26
HLA-DMB-259ENST00000438510 TMEM101Q96IK0 257 aa7.17□□□□□ -1.26
HLA-DMB-259ENST00000438510 CYSLTR1Q9Y271 337 aa7.17□□□□□ -1.26
HLA-DMB-259ENST00000438510 DNAH6Q9C0G6 4158 aa7.16□□□□□ -1.26
HLA-DMB-259ENST00000438510 LINC01549A6NIU2 74 aa7.16□□□□□ -1.26
HLA-DMB-259ENST00000438510 TSTD3H0UI37 97 aa7.16□□□□□ -1.26
HLA-DMB-259ENST00000438510 BTF3P20290 206 aaKnown RBP7.16□□□□□ -1.26
HLA-DMB-259ENST00000438510 DGAT2L7PQ6IED9 249 aa7.16□□□□□ -1.26
HLA-DMB-259ENST00000438510 MRPL52Q86TS9 123 aaKnown RBP7.16□□□□□ -1.26
HLA-DMB-259ENST00000438510 OR5A1Q8NGJ0 315 aa7.16□□□□□ -1.26
HLA-DMB-259ENST00000438510 CHCHD1Q96BP2 118 aaKnown RBP7.16□□□□□ -1.26
HLA-DMB-259ENST00000438510 IBA57-AS1B1ANH7 110 aa7.15□□□□□ -1.26
HLA-DMB-259ENST00000438510 CRPP02741 224 aa7.15□□□□□ -1.26
HLA-DMB-259ENST00000438510 ANGP03950 147 aaKnown RBP7.15□□□□□ -1.26
HLA-DMB-259ENST00000438510 C2orf66Q6UXQ4 117 aa7.15□□□□□ -1.26
HLA-DMB-259ENST00000438510 Q6ZR54 194 aa7.15□□□□□ -1.26
HLA-DMB-259ENST00000438510 Q8N3U1 123 aa7.15□□□□□ -1.26
HLA-DMB-259ENST00000438510 Q8N976 141 aa7.15□□□□□ -1.26
HLA-DMB-259ENST00000438510 TIMM21Q9BVV7 248 aa7.15□□□□□ -1.26
HLA-DMB-259ENST00000438510 SPANXA1Q9NS26 97 aa7.15□□□□□ -1.26
HLA-DMB-259ENST00000438510 KLK12Q9UKR0 248 aa7.15□□□□□ -1.26
HLA-DMB-259ENST00000438510 UBE2D4Q9Y2X8 147 aa7.15□□□□□ -1.26
HLA-DMB-259ENST00000438510 CSDC2Q9Y534 153 aaKnown RBP7.15□□□□□ -1.26
HLA-DMB-259ENST00000438510 TRAV8-3A0A0A6YYJ7 113 aa7.14□□□□□ -1.27
HLA-DMB-259ENST00000438510 M0R2N4 97 aa7.14□□□□□ -1.27
HLA-DMB-259ENST00000438510 LORP23490 312 aaPredicted RBP7.14□□□□□ -1.27
HLA-DMB-259ENST00000438510 RPL39P62891 51 aaKnown RBP7.14□□□□□ -1.27
HLA-DMB-259ENST00000438510 KRTAP1-5Q9BYS1 174 aa7.14□□□□□ -1.27
HLA-DMB-259ENST00000438510 IGLV4-60A0A075B6I1 120 aa7.13□□□□□ -1.27
HLA-DMB-259ENST00000438510 HSBP1O75506 76 aa7.13□□□□□ -1.27
HLA-DMB-259ENST00000438510 SERF1AO75920 110 aa7.13□□□□□ -1.27
HLA-DMB-259ENST00000438510 PDZD11Q5EBL8 140 aa7.13□□□□□ -1.27
HLA-DMB-259ENST00000438510 NFE4Q86UQ8 179 aa7.13□□□□□ -1.27
HLA-DMB-259ENST00000438510 LINC00269Q8N2A0 174 aa7.13□□□□□ -1.27
HLA-DMB-259ENST00000438510 TOMM6Q96B49 74 aa7.13□□□□□ -1.27
HLA-DMB-259ENST00000438510 URB1-AS1Q96HZ7 61 aa7.13□□□□□ -1.27
HLA-DMB-259ENST00000438510 PYGO1Q9Y3Y4 419 aa7.13□□□□□ -1.27
HLA-DMB-259ENST00000438510 KMT2AQ03164 3969 aa7.13□□□□□ -1.27
HLA-DMB-259ENST00000438510 SACSQ9NZJ4 4579 aa7.12□□□□□ -1.27
HLA-DMB-259ENST00000438510 HBDP02042 147 aa7.12□□□□□ -1.27
HLA-DMB-259ENST00000438510 NPSP0C0P6 89 aa7.12□□□□□ -1.27
HLA-DMB-259ENST00000438510 MRPS36P82909 103 aaKnown RBP7.12□□□□□ -1.27
HLA-DMB-259ENST00000438510 REG3AQ06141 175 aa7.12□□□□□ -1.27
HLA-DMB-259ENST00000438510 MIAQ16674 131 aa7.12□□□□□ -1.27
HLA-DMB-259ENST00000438510 LBHQ53QV2 105 aaPredicted RBP7.12□□□□□ -1.27
HLA-DMB-259ENST00000438510 C6orf223Q8N319 242 aa7.12□□□□□ -1.27
HLA-DMB-259ENST00000438510 ZNF664Q8N3J9 261 aa7.12□□□□□ -1.27
HLA-DMB-259ENST00000438510 UBE2WQ96B02 151 aa7.12□□□□□ -1.27
HLA-DMB-259ENST00000438510 RMI2Q96E14 147 aa7.12□□□□□ -1.27
HLA-DMB-259ENST00000438510 CDC42SE2Q9NRR3 84 aa7.12□□□□□ -1.27
HLA-DMB-259ENST00000438510 PRR34Q9NV39 138 aa7.12□□□□□ -1.27
HLA-DMB-259ENST00000438510 PAPPA-AS1Q5QFB9 102 aa7.11□□□□□ -1.27
HLA-DMB-259ENST00000438510 C1orf134Q5TEV5 83 aa7.11□□□□□ -1.27
HLA-DMB-259ENST00000438510 CLPSL2Q6UWE3 100 aa7.11□□□□□ -1.27
HLA-DMB-259ENST00000438510 Q6ZN92 141 aa7.11□□□□□ -1.27
HLA-DMB-259ENST00000438510 Q6ZUT4 128 aa7.11□□□□□ -1.27
HLA-DMB-259ENST00000438510 TIMM17AQ99595 171 aa7.11□□□□□ -1.27
HLA-DMB-259ENST00000438510 Q9HAA7 133 aa7.11□□□□□ -1.27
HLA-DMB-259ENST00000438510 HYDINQ4G0P3 5121 aa7.11□□□□□ -1.27
HLA-DMB-259ENST00000438510 TRAV8-4A0A0B4J246 113 aa7.1□□□□□ -1.27
HLA-DMB-259ENST00000438510 C20orf202A1L168 122 aa7.1□□□□□ -1.27
HLA-DMB-259ENST00000438510 LINC00310P59036 64 aa7.1□□□□□ -1.27
HLA-DMB-259ENST00000438510 PMCHL1Q16048 86 aa7.1□□□□□ -1.27
HLA-DMB-259ENST00000438510 ENHOQ6UWT2 76 aa7.1□□□□□ -1.27
HLA-DMB-259ENST00000438510 ERASQ7Z444 233 aa7.1□□□□□ -1.27
HLA-DMB-259ENST00000438510 TMEM141Q96I45 108 aa7.1□□□□□ -1.27
HLA-DMB-259ENST00000438510 SCGB3A1Q96QR1 104 aa7.1□□□□□ -1.27
HLA-DMB-259ENST00000438510 C1orf43Q9BWL3 253 aa7.1□□□□□ -1.27
HLA-DMB-259ENST00000438510 TM2D2Q9BX73 214 aa7.1□□□□□ -1.27
HLA-DMB-259ENST00000438510 COX11Q9Y6N1 276 aa7.1□□□□□ -1.27
HLA-DMB-259ENST00000438510 IGLV4-3A0A075B6K6 122 aa7.09□□□□□ -1.27
HLA-DMB-259ENST00000438510 A0A096LNJ9 63 aa7.09□□□□□ -1.27
HLA-DMB-259ENST00000438510 IGIPA6NJ69 53 aa7.09□□□□□ -1.27
HLA-DMB-259ENST00000438510 PCP4L1A6NKN8 68 aa7.09□□□□□ -1.27
HLA-DMB-259ENST00000438510 TEX43Q6ZNM6 134 aa7.09□□□□□ -1.27
HLA-DMB-259ENST00000438510 C2orf88Q9BSF0 95 aa7.09□□□□□ -1.27
HLA-DMB-259ENST00000438510 IGKV2D-24A0A075B6R9 120 aa7.08□□□□□ -1.28
HLA-DMB-259ENST00000438510 IGKV3OR2-268A0A0C4DH90 116 aa7.08□□□□□ -1.28
HLA-DMB-259ENST00000438510 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.08□□□□□ -1.28
HLA-DMB-259ENST00000438510 CCL25O15444 150 aa7.08□□□□□ -1.28
HLA-DMB-259ENST00000438510 ATP5LO75964 103 aa7.08□□□□□ -1.28
HLA-DMB-259ENST00000438510 CTAG1AP78358 180 aa7.08□□□□□ -1.28
HLA-DMB-259ENST00000438510 SS18Q15532 418 aa7.08□□□□□ -1.28
HLA-DMB-259ENST00000438510 RNASE13Q5GAN3 156 aaKnown RBP7.08□□□□□ -1.28
HLA-DMB-259ENST00000438510 VCX2Q9H322 139 aa7.08□□□□□ -1.28
HLA-DMB-259ENST00000438510 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
HLA-DMB-259ENST00000438510 PSCAO43653 123 aa7.07□□□□□ -1.28
HLA-DMB-259ENST00000438510 SCGB1D1O95968 90 aa7.07□□□□□ -1.28
HLA-DMB-259ENST00000438510 FAM19A2Q8N3H0 131 aa7.07□□□□□ -1.28
HLA-DMB-259ENST00000438510 OPRPNQ99935 248 aaPredicted RBP7.07□□□□□ -1.28
HLA-DMB-259ENST00000438510 KRTAP4-6Q9BYQ5 205 aa7.07□□□□□ -1.28
HLA-DMB-259ENST00000438510 HSPB8Q9UJY1 196 aa7.07□□□□□ -1.28
HLA-DMB-259ENST00000438510 RYR2Q92736 4967 aa7.07□□□□□ -1.28
HLA-DMB-259ENST00000438510 IGLV10-54A0A075B6I4 117 aa7.06□□□□□ -1.28
HLA-DMB-259ENST00000438510 LINC00959A0A1B0GUT2 108 aa7.06□□□□□ -1.28
HLA-DMB-259ENST00000438510 NUPR1O60356 82 aa7.06□□□□□ -1.28
HLA-DMB-259ENST00000438510 LEPROTL1O95214 131 aa7.06□□□□□ -1.28
HLA-DMB-259ENST00000438510 DDTP30046 118 aa7.06□□□□□ -1.28
HLA-DMB-259ENST00000438510 Q6ZRN7 208 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms