RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 PCP2Q8IVA1 136 aa10.83□□□□□ -0.68
SGCE-205ENST00000437425 OPRPNQ99935 248 aaPredicted RBP10.83□□□□□ -0.68
SGCE-205ENST00000437425 TRRAPQ9Y4A5 3859 aa10.82□□□□□ -0.68
SGCE-205ENST00000437425 TRBV6-8A0A0A6YYG3 113 aa10.82□□□□□ -0.68
SGCE-205ENST00000437425 TINCRA0A1B0GVN0 87 aa10.82□□□□□ -0.68
SGCE-205ENST00000437425 PAX4O43316 350 aa10.82□□□□□ -0.68
SGCE-205ENST00000437425 SH2D6Q7Z4S9 175 aa10.82□□□□□ -0.68
SGCE-205ENST00000437425 GYPEP15421 78 aa10.81□□□□□ -0.68
SGCE-205ENST00000437425 HSD52Q0P140 79 aa10.81□□□□□ -0.68
SGCE-205ENST00000437425 AMMECR1LQ6DCA0 310 aa10.81□□□□□ -0.68
SGCE-205ENST00000437425 OR5A1Q8NGJ0 315 aa10.81□□□□□ -0.68
SGCE-205ENST00000437425 ATP6V0E2Q8NHE4 81 aa10.81□□□□□ -0.68
SGCE-205ENST00000437425 FAM104AQ969W3 186 aa10.81□□□□□ -0.68
SGCE-205ENST00000437425 TRAV26-1A0A087WT03 109 aa10.8□□□□□ -0.68
SGCE-205ENST00000437425 TRAV8-6A0A0B4J262 113 aa10.8□□□□□ -0.68
SGCE-205ENST00000437425 LOC100131303A0A0U1RQF7 123 aa10.8□□□□□ -0.68
SGCE-205ENST00000437425 MYMXA0A1B0GTQ4 84 aa10.8□□□□□ -0.68
SGCE-205ENST00000437425 G3V4G9 280 aa10.8□□□□□ -0.68
SGCE-205ENST00000437425 BATFQ16520 125 aa10.8□□□□□ -0.68
SGCE-205ENST00000437425 Q6ZUT4 128 aa10.8□□□□□ -0.68
SGCE-205ENST00000437425 C11orf68Q9H3H3 251 aaKnown RBP10.8□□□□□ -0.68
SGCE-205ENST00000437425 HINT1P49773 126 aaPredicted RBP10.79□□□□□ -0.68
SGCE-205ENST00000437425 TCTAP57738 103 aa10.79□□□□□ -0.68
SGCE-205ENST00000437425 TIRAPP58753 221 aa10.79□□□□□ -0.68
SGCE-205ENST00000437425 FAM19A3Q7Z5A8 133 aa10.79□□□□□ -0.68
SGCE-205ENST00000437425 A0A0J9YXV3 536 aa10.79□□□□□ -0.68
SGCE-205ENST00000437425 TMEM223A0PJW6 202 aa10.79□□□□□ -0.68
SGCE-205ENST00000437425 ZNF22P17026 224 aaPredicted RBP10.79□□□□□ -0.68
SGCE-205ENST00000437425 UBE2D1P51668 147 aa10.79□□□□□ -0.68
SGCE-205ENST00000437425 TAL2Q16559 108 aa10.79□□□□□ -0.68
SGCE-205ENST00000437425 MPV17L2Q567V2 206 aa10.79□□□□□ -0.68
SGCE-205ENST00000437425 CEMP1Q6PRD7 247 aaPredicted RBP10.79□□□□□ -0.68
SGCE-205ENST00000437425 PLEKHB2Q96CS7 222 aa10.79□□□□□ -0.68
SGCE-205ENST00000437425 LEPROTO15243 131 aa10.78□□□□□ -0.68
SGCE-205ENST00000437425 DEFB4AO15263 64 aa10.78□□□□□ -0.68
SGCE-205ENST00000437425 BVES-AS1Q5T3Y7 98 aa10.78□□□□□ -0.68
SGCE-205ENST00000437425 GEMIN7Q9H840 131 aaKnown RBP10.78□□□□□ -0.68
SGCE-205ENST00000437425 CDC42SE2Q9NRR3 84 aa10.78□□□□□ -0.68
SGCE-205ENST00000437425 H3BRM9 83 aa10.77□□□□□ -0.69
SGCE-205ENST00000437425 HERVK_113P63121 156 aa10.77□□□□□ -0.69
SGCE-205ENST00000437425 MRPL23Q16540 153 aaKnown RBP10.76□□□□□ -0.69
SGCE-205ENST00000437425 CELA1Q9UNI1 258 aa10.76□□□□□ -0.69
SGCE-205ENST00000437425 IGLV5-45A0A087WSX0 123 aa10.75□□□□□ -0.69
SGCE-205ENST00000437425 ZNF815PA8K554 130 aa10.75□□□□□ -0.69
SGCE-205ENST00000437425 LGALS3P17931 250 aaKnown RBP10.75□□□□□ -0.69
SGCE-205ENST00000437425 CHCHD5Q9BSY4 110 aa10.75□□□□□ -0.69
SGCE-205ENST00000437425 TP73-AS1Q9UF72 201 aa10.75□□□□□ -0.69
SGCE-205ENST00000437425 F5H768 121 aa10.74□□□□□ -0.69
SGCE-205ENST00000437425 H3BNG1 76 aa10.74□□□□□ -0.69
SGCE-205ENST00000437425 J3QQQ9 107 aa10.74□□□□□ -0.69
SGCE-205ENST00000437425 KPRPQ5T749 579 aaPredicted RBP10.74□□□□□ -0.69
SGCE-205ENST00000437425 MAPKAPK5-AS1Q8N8E1 139 aa10.74□□□□□ -0.69
SGCE-205ENST00000437425 VSIG2Q96IQ7 327 aa10.74□□□□□ -0.69
SGCE-205ENST00000437425 A0A1B0GUV1 79 aa10.74□□□□□ -0.69
SGCE-205ENST00000437425 A6NDN8 102 aa10.74□□□□□ -0.69
SGCE-205ENST00000437425 ORAOV1Q8WV07 137 aa10.74□□□□□ -0.69
SGCE-205ENST00000437425 ICOSQ9Y6W8 199 aa10.74□□□□□ -0.69
SGCE-205ENST00000437425 IGHV1-58A0A0C4DH39 117 aa10.73□□□□□ -0.69
SGCE-205ENST00000437425 RNASE13Q5GAN3 156 aaKnown RBP10.73□□□□□ -0.69
SGCE-205ENST00000437425 LINC00469Q8N7U9 141 aa10.73□□□□□ -0.69
SGCE-205ENST00000437425 TTTY13Q9BZ97 58 aa10.73□□□□□ -0.69
SGCE-205ENST00000437425 GAGE6Q13070 117 aa10.72□□□□□ -0.69
SGCE-205ENST00000437425 SCGB1D4Q6XE38 83 aa10.72□□□□□ -0.69
SGCE-205ENST00000437425 SPATA25Q9BR10 227 aa10.72□□□□□ -0.69
SGCE-205ENST00000437425 ANK2Q01484 3957 aa10.71□□□□□ -0.69
SGCE-205ENST00000437425 CCL25O15444 150 aa10.71□□□□□ -0.69
SGCE-205ENST00000437425 C12orf74Q32Q52 190 aa10.71□□□□□ -0.69
SGCE-205ENST00000437425 TM2D2Q9BX73 214 aa10.71□□□□□ -0.69
SGCE-205ENST00000437425 CMYA5Q8N3K9 4069 aa10.7□□□□□ -0.7
SGCE-205ENST00000437425 LINC00242Q5T6M2 205 aa10.7□□□□□ -0.7
SGCE-205ENST00000437425 A0A0J9YY99 117 aa10.69□□□□□ -0.7
SGCE-205ENST00000437425 A0A1B0GV90 55 aa10.69□□□□□ -0.7
SGCE-205ENST00000437425 IGHV3-30-3P0DP02 117 aa10.69□□□□□ -0.7
SGCE-205ENST00000437425 CEND1Q8N111 149 aa10.69□□□□□ -0.7
SGCE-205ENST00000437425 HIST1H4GQ99525 98 aa10.69□□□□□ -0.7
SGCE-205ENST00000437425 TRAV13-1A0A0B4J241 112 aa10.68□□□□□ -0.7
SGCE-205ENST00000437425 SPANXB1Q9NS25 103 aaPredicted RBP10.68□□□□□ -0.7
SGCE-205ENST00000437425 HTN3P15516 51 aa10.68□□□□□ -0.7
SGCE-205ENST00000437425 RETNQ9HD89 108 aa10.68□□□□□ -0.7
SGCE-205ENST00000437425 CDKN2A-AS1Q9UH64 79 aa10.68□□□□□ -0.7
SGCE-205ENST00000437425 DNAH3Q8TD57 4116 aa10.67□□□□□ -0.7
SGCE-205ENST00000437425 NBEAL2Q6ZNJ1 2754 aa10.67□□□□□ -0.7
SGCE-205ENST00000437425 TMEM262E9PQX1 116 aa10.67□□□□□ -0.7
SGCE-205ENST00000437425 GCSHP23434 173 aa10.67□□□□□ -0.7
SGCE-205ENST00000437425 TSPEAR-AS2P59090 65 aa10.67□□□□□ -0.7
SGCE-205ENST00000437425 LELP1Q5T871 98 aa10.67□□□□□ -0.7
SGCE-205ENST00000437425 TM2D3Q9BRN9 247 aa10.67□□□□□ -0.7
SGCE-205ENST00000437425 TMEM238LA0A1B0GVL6 79 aa10.66□□□□□ -0.7
SGCE-205ENST00000437425 A6NJY4 79 aa10.66□□□□□ -0.7
SGCE-205ENST00000437425 PTTG1IPP53801 180 aa10.66□□□□□ -0.7
SGCE-205ENST00000437425 IGLV5-39A0A0G2JS06 123 aa10.65□□□□□ -0.7
SGCE-205ENST00000437425 SRSF9Q13242 221 aaKnown RBP eCLIP10.65□□□□□ -0.7
SGCE-205ENST00000437425 ZFAND6Q6FIF0 208 aa10.65□□□□□ -0.7
SGCE-205ENST00000437425 C11orf45Q8TAV5 145 aa10.65□□□□□ -0.7
SGCE-205ENST00000437425 IGLV4-60A0A075B6I1 120 aa10.64□□□□□ -0.71
SGCE-205ENST00000437425 A0A096LPF7 62 aa10.64□□□□□ -0.71
SGCE-205ENST00000437425 TMEM238C9JI98 176 aa10.64□□□□□ -0.71
SGCE-205ENST00000437425 K7EIL1 84 aa10.64□□□□□ -0.71
SGCE-205ENST00000437425 SPINK8P0C7L1 97 aa10.64□□□□□ -0.71
SGCE-205ENST00000437425 RBX1P62877 108 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms