RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 SYS1-DBNDD2H3BUS1 97 aa15.74■□□□□ 0.11
CPSF4-204ENST00000436336 PRSS1P07477 247 aa15.74■□□□□ 0.11
CPSF4-204ENST00000436336 MPV17L2Q567V2 206 aa15.74■□□□□ 0.11
CPSF4-204ENST00000436336 WFDC10BQ8IUB3 73 aa15.74■□□□□ 0.11
CPSF4-204ENST00000436336 A0A087WX48 190 aa15.73■□□□□ 0.11
CPSF4-204ENST00000436336 AKR1D1P51857 326 aa15.73■□□□□ 0.11
CPSF4-204ENST00000436336 RBX1P62877 108 aa15.73■□□□□ 0.11
CPSF4-204ENST00000436336 Q6ZUT4 128 aa15.73■□□□□ 0.11
CPSF4-204ENST00000436336 CDC42SE2Q9NRR3 84 aa15.73■□□□□ 0.11
CPSF4-204ENST00000436336 STARD9Q9P2P6 4700 aa15.72■□□□□ 0.11
CPSF4-204ENST00000436336 SPATA12Q7Z6I5 190 aa15.72■□□□□ 0.11
CPSF4-204ENST00000436336 Q8N976 141 aa15.72■□□□□ 0.11
CPSF4-204ENST00000436336 IGLV4-60A0A075B6I1 120 aa15.71■□□□□ 0.11
CPSF4-204ENST00000436336 H0Y8G0 127 aa15.71■□□□□ 0.11
CPSF4-204ENST00000436336 PET117Q6UWS5 81 aa15.71■□□□□ 0.11
CPSF4-204ENST00000436336 ZNF664Q8N3J9 261 aa15.71■□□□□ 0.11
CPSF4-204ENST00000436336 VCX2Q9H322 139 aa15.71■□□□□ 0.11
CPSF4-204ENST00000436336 PLECQ15149 4684 aaKnown RBP15.71■□□□□ 0.11
CPSF4-204ENST00000436336 TRAV12-1A0A0B4J245 112 aa15.71■□□□□ 0.1
CPSF4-204ENST00000436336 PMVKQ15126 192 aa15.71■□□□□ 0.1
CPSF4-204ENST00000436336 TEX43Q6ZNM6 134 aa15.71■□□□□ 0.1
CPSF4-204ENST00000436336 AMELXQ99217 191 aa15.71■□□□□ 0.1
CPSF4-204ENST00000436336 UPK3BQ9BT76 320 aa15.71■□□□□ 0.1
CPSF4-204ENST00000436336 RNASE13Q5GAN3 156 aaKnown RBP15.68■□□□□ 0.1
CPSF4-204ENST00000436336 ZC2HC1BQ5TFG8 222 aa15.68■□□□□ 0.1
CPSF4-204ENST00000436336 Q8N3U1 123 aa15.68■□□□□ 0.1
CPSF4-204ENST00000436336 CST9LQ9H4G1 147 aa15.68■□□□□ 0.1
CPSF4-204ENST00000436336 PRSS29PA6NIE9 313 aa15.67■□□□□ 0.1
CPSF4-204ENST00000436336 LGALS9CQ6DKI2 356 aa15.67■□□□□ 0.1
CPSF4-204ENST00000436336 C2orf88Q9BSF0 95 aa15.67■□□□□ 0.1
CPSF4-204ENST00000436336 LINC01556Q5JQF7 62 aa15.66■□□□□ 0.1
CPSF4-204ENST00000436336 LINC01545Q5VT33 79 aa15.66■□□□□ 0.1
CPSF4-204ENST00000436336 UBE2DNLQ8IWF7 75 aa15.66■□□□□ 0.1
CPSF4-204ENST00000436336 C20orf202A1L168 122 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 SIVA1O15304 175 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 DNAH10OSP0CZ25 163 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 ODF1Q14990 250 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 C3orf84H3BNL1 204 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 IGHV3-30P01768 117 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 IGHV3-33P01772 117 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 ANGP03950 147 aaKnown RBP15.65■□□□□ 0.1
CPSF4-204ENST00000436336 IGHV3-30-3P0DP02 117 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 IGHV3-30-5P0DP03 117 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 JOSD1Q15040 202 aaPredicted RBP15.65■□□□□ 0.1
CPSF4-204ENST00000436336 CHTOPQ9Y3Y2 248 aaKnown RBP15.64■□□□□ 0.09
CPSF4-204ENST00000436336 SCGB1D1O95968 90 aa15.63■□□□□ 0.09
CPSF4-204ENST00000436336 CASC10Q5T4H9 136 aa15.63■□□□□ 0.09
CPSF4-204ENST00000436336 F8VRH5 84 aa15.63■□□□□ 0.09
CPSF4-204ENST00000436336 LINC00269Q8N2A0 174 aa15.62■□□□□ 0.09
CPSF4-204ENST00000436336 MRPL35Q9NZE8 188 aaKnown RBP15.62■□□□□ 0.09
CPSF4-204ENST00000436336 PYY3Q5JQD4 70 aa15.61■□□□□ 0.09
CPSF4-204ENST00000436336 PMCHL2Q9BQD1 86 aa15.61■□□□□ 0.09
CPSF4-204ENST00000436336 Q9H8V8 135 aa15.61■□□□□ 0.09
CPSF4-204ENST00000436336 KLK12Q9UKR0 248 aa15.61■□□□□ 0.09
CPSF4-204ENST00000436336 UBE2D1P51668 147 aa15.6■□□□□ 0.09
CPSF4-204ENST00000436336 REG3AQ06141 175 aa15.6■□□□□ 0.09
CPSF4-204ENST00000436336 PRR34Q9NV39 138 aa15.59■□□□□ 0.09
CPSF4-204ENST00000436336 IGLV4-69A0A075B6H9 119 aa15.58■□□□□ 0.08
CPSF4-204ENST00000436336 TRAV13-1A0A0B4J241 112 aa15.58■□□□□ 0.08
CPSF4-204ENST00000436336 IGKV3OR2-268A0A0C4DH90 116 aa15.58■□□□□ 0.08
CPSF4-204ENST00000436336 FAM19A3Q7Z5A8 133 aa15.58■□□□□ 0.08
CPSF4-204ENST00000436336 TENM2Q9NT68 2774 aa15.58■□□□□ 0.08
CPSF4-204ENST00000436336 DPM2O94777 84 aa15.57■□□□□ 0.08
CPSF4-204ENST00000436336 CLPSL2Q6UWE3 100 aa15.57■□□□□ 0.08
CPSF4-204ENST00000436336 A0A0J9YXV3 536 aa15.57■□□□□ 0.08
CPSF4-204ENST00000436336 LINC00959A0A1B0GUT2 108 aa15.57■□□□□ 0.08
CPSF4-204ENST00000436336 IGLC3P0DOY3 106 aa15.57■□□□□ 0.08
CPSF4-204ENST00000436336 PLNP26678 52 aa15.57■□□□□ 0.08
CPSF4-204ENST00000436336 CCL25O15444 150 aa15.56■□□□□ 0.08
CPSF4-204ENST00000436336 IGKCP01834 107 aa15.56■□□□□ 0.08
CPSF4-204ENST00000436336 CRPP02741 224 aa15.56■□□□□ 0.08
CPSF4-204ENST00000436336 SEC11AP67812 179 aa15.56■□□□□ 0.08
CPSF4-204ENST00000436336 NFE4Q86UQ8 179 aa15.56■□□□□ 0.08
CPSF4-204ENST00000436336 K7EP13 123 aa15.55■□□□□ 0.08
CPSF4-204ENST00000436336 TINCRA0A1B0GVN0 87 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 SS18Q15532 418 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 LINC00242Q5T6M2 205 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 ENHOQ6UWT2 76 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 C10orf126Q8N4M7 172 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 CHAC1Q9BUX1 264 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 LYSTQ99698 3801 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 TRAV9-2A0A087WT02 112 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 UBE2WQ96B02 151 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 C11orf86A6NJI1 115 aa15.53■□□□□ 0.08
CPSF4-204ENST00000436336 SMIM6P0DI80 62 aa15.53■□□□□ 0.08
CPSF4-204ENST00000436336 HERVK_113P63121 156 aa15.52■□□□□ 0.08
CPSF4-204ENST00000436336 ATOH7Q8N100 152 aa15.52■□□□□ 0.08
CPSF4-204ENST00000436336 VPS13DQ5THJ4 4388 aa15.52■□□□□ 0.07
CPSF4-204ENST00000436336 MIAQ16674 131 aa15.51■□□□□ 0.07
CPSF4-204ENST00000436336 GEMIN7Q9H840 131 aaKnown RBP15.51■□□□□ 0.07
CPSF4-204ENST00000436336 IBA57-AS1B1ANH7 110 aa15.51■□□□□ 0.07
CPSF4-204ENST00000436336 TRAV8-4A0A0B4J246 113 aa15.5■□□□□ 0.07
CPSF4-204ENST00000436336 DNAH1Q9P2D7 4330 aa15.49■□□□□ 0.07
CPSF4-204ENST00000436336 COX6A2Q02221 97 aa15.49■□□□□ 0.07
CPSF4-204ENST00000436336 ZNF22P17026 224 aaPredicted RBP15.48■□□□□ 0.07
CPSF4-204ENST00000436336 IGLV5-45A0A087WSX0 123 aa15.48■□□□□ 0.07
CPSF4-204ENST00000436336 TMEM170BQ5T4T1 132 aa15.48■□□□□ 0.07
CPSF4-204ENST00000436336 CHCHD10Q8WYQ3 142 aaPredicted RBP15.48■□□□□ 0.07
CPSF4-204ENST00000436336 IGLV10-54A0A075B6I4 117 aa15.47■□□□□ 0.07
CPSF4-204ENST00000436336 CDPF1Q6NVV7 123 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms