RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 TSSC4Q9Y5U2 329 aaPredicted RBP5.39□□□□□ -1.55
COL17A1-204ENST00000433822 PRKDCP78527 4128 aaKnown RBP5.38□□□□□ -1.55
COL17A1-204ENST00000433822 NACAE9PAV3 2078 aa5.38□□□□□ -1.55
COL17A1-204ENST00000433822 CCL24O00175 119 aa5.38□□□□□ -1.55
COL17A1-204ENST00000433822 NDUFA7O95182 113 aa5.38□□□□□ -1.55
COL17A1-204ENST00000433822 ZNF22P17026 224 aaPredicted RBP5.38□□□□□ -1.55
COL17A1-204ENST00000433822 TCTAP57738 103 aa5.38□□□□□ -1.55
COL17A1-204ENST00000433822 DEFB136Q30KP8 78 aa5.38□□□□□ -1.55
COL17A1-204ENST00000433822 ODF3L2Q3SX64 289 aa5.38□□□□□ -1.55
COL17A1-204ENST00000433822 CD300EQ496F6 205 aaPredicted RBP5.38□□□□□ -1.55
COL17A1-204ENST00000433822 CFAP126Q5VTH2 177 aa5.38□□□□□ -1.55
COL17A1-204ENST00000433822 SCGB1D4Q6XE38 83 aa5.38□□□□□ -1.55
COL17A1-204ENST00000433822 ZNRF2Q8NHG8 242 aa5.38□□□□□ -1.55
COL17A1-204ENST00000433822 RNF183Q96D59 192 aa5.38□□□□□ -1.55
COL17A1-204ENST00000433822 VCX2Q9H322 139 aa5.38□□□□□ -1.55
COL17A1-204ENST00000433822 CSDC2Q9Y534 153 aaKnown RBP5.38□□□□□ -1.55
COL17A1-204ENST00000433822 TNFRSF18Q9Y5U5 241 aa5.38□□□□□ -1.55
COL17A1-204ENST00000433822 TINCRA0A1B0GVN0 87 aa5.37□□□□□ -1.55
COL17A1-204ENST00000433822 LGALS3P17931 250 aaKnown RBP5.37□□□□□ -1.55
COL17A1-204ENST00000433822 TMEM170BQ5T4T1 132 aa5.37□□□□□ -1.55
COL17A1-204ENST00000433822 C18orf65Q6ZTR6 163 aa5.37□□□□□ -1.55
COL17A1-204ENST00000433822 FAM19A3Q7Z5A8 133 aa5.37□□□□□ -1.55
COL17A1-204ENST00000433822 RAB37Q96AX2 223 aa5.37□□□□□ -1.55
COL17A1-204ENST00000433822 PPDPFQ9H3Y8 114 aa5.37□□□□□ -1.55
COL17A1-204ENST00000433822 TRBV20-1A0A075B6N2 111 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 IGLV5-45A0A087WSX0 123 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 A0A0B4J2C4 111 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 TMEM238C9JI98 176 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 G3V4G9 280 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 TIMM17BO60830 172 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 IGHV3-30P01768 117 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 IGHV3-30-5P0DP03 117 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 TIRAPP58753 221 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 UBE2D3P61077 147 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 UBE2D2P62837 147 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 DAZ2Q13117 558 aaKnown RBP5.36□□□□□ -1.55
COL17A1-204ENST00000433822 SRSF9Q13242 221 aaKnown RBP eCLIP5.36□□□□□ -1.55
COL17A1-204ENST00000433822 STHQ8IWL8 128 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 TMEM263Q8WUH6 116 aaKnown RBP5.36□□□□□ -1.55
COL17A1-204ENST00000433822 LINC01587Q99440 93 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 CHCHD7Q9BUK0 85 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 UBE2D4Q9Y2X8 147 aa5.36□□□□□ -1.55
COL17A1-204ENST00000433822 SORL1Q92673 2214 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.35□□□□□ -1.55
COL17A1-204ENST00000433822 TRAV4A0A0B4J268 109 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 J3QR89 54 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 K7ERJ3 54 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 M0QXV9 152 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 CD28P10747 220 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 TSPEAR-AS2P59090 65 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 COTL1Q14019 142 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 KHDC1LQ5JSQ8 128 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 C1orf158Q8N1D5 194 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 C10orf126Q8N4M7 172 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 ATP6V0E2Q8NHE4 81 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 FAM104AQ969W3 186 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 C1QTNF4Q9BXJ3 329 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 SELENOKQ9Y6D0 94 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 WNK1Q9H4A3 2382 aa5.35□□□□□ -1.55
COL17A1-204ENST00000433822 IGHV1-58A0A0C4DH39 117 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 A0A0J9YXY3 114 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 H7C423 109 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 CRLF1O75462 422 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 IGLV1-51P01701 117 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 HILS1P60008 231 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 RPL24P83731 157 aaKnown RBP5.34□□□□□ -1.55
COL17A1-204ENST00000433822 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 KRTAP24-1Q3LI83 254 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 DAZ4Q86SG3 579 aaKnown RBP5.34□□□□□ -1.55
COL17A1-204ENST00000433822 NDUFA11Q86Y39 141 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 LINC01006Q8NI28 216 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 ZNF418Q8TF45 676 aaPredicted RBP5.34□□□□□ -1.55
COL17A1-204ENST00000433822 C16orf74Q96GX8 76 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 LINC01600Q96MT4 127 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 SPANXDQ9BXN6 97 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 ESM1Q9NQ30 184 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 DAZ3Q9NR90 486 aaKnown RBP5.34□□□□□ -1.55
COL17A1-204ENST00000433822 SPANXCQ9NY87 97 aa5.34□□□□□ -1.55
COL17A1-204ENST00000433822 IGHV3-30-3P0DP02 117 aa5.33□□□□□ -1.56
COL17A1-204ENST00000433822 IFITM1P13164 125 aa5.33□□□□□ -1.56
COL17A1-204ENST00000433822 RPL36AP83881 106 aaKnown RBP5.33□□□□□ -1.56
COL17A1-204ENST00000433822 Q6ZSN1 163 aa5.33□□□□□ -1.56
COL17A1-204ENST00000433822 RPL36ALQ969Q0 106 aaKnown RBP5.33□□□□□ -1.56
COL17A1-204ENST00000433822 OVOL2Q9BRP0 275 aa5.33□□□□□ -1.56
COL17A1-204ENST00000433822 GTSF1LQ9H1H1 148 aa5.33□□□□□ -1.56
COL17A1-204ENST00000433822 PRO1854Q9UHT4 67 aa5.33□□□□□ -1.56
COL17A1-204ENST00000433822 PRO0461Q9UI25 63 aa5.33□□□□□ -1.56
COL17A1-204ENST00000433822 TRRAPQ9Y4A5 3859 aa5.32□□□□□ -1.56
COL17A1-204ENST00000433822 A0A0J9YXV3 536 aa5.32□□□□□ -1.56
COL17A1-204ENST00000433822 H3BMG7 143 aa5.32□□□□□ -1.56
COL17A1-204ENST00000433822 K7EQD1 137 aa5.32□□□□□ -1.56
COL17A1-204ENST00000433822 TSPAN13O95857 204 aa5.32□□□□□ -1.56
COL17A1-204ENST00000433822 CFC1BP0CG36 223 aa5.32□□□□□ -1.56
COL17A1-204ENST00000433822 CFC1P0CG37 223 aa5.32□□□□□ -1.56
COL17A1-204ENST00000433822 AZU1P20160 251 aa5.32□□□□□ -1.56
COL17A1-204ENST00000433822 HERVK_113P63121 156 aa5.32□□□□□ -1.56
COL17A1-204ENST00000433822 GAGE13Q4V321 117 aa5.32□□□□□ -1.56
COL17A1-204ENST00000433822 HIST2H2BDQ6DRA6 164 aa5.32□□□□□ -1.56
COL17A1-204ENST00000433822 ZFAND6Q6FIF0 208 aa5.32□□□□□ -1.56
COL17A1-204ENST00000433822 SBSPONQ8IVN8 264 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms