RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 HIST1H2BBP33778 126 aa10.32□□□□□ -0.76
CNOT9-205ENST00000433439 HIST1H2BDP58876 126 aa10.32□□□□□ -0.76
CNOT9-205ENST00000433439 HIST1H2BCP62807 126 aa10.32□□□□□ -0.76
CNOT9-205ENST00000433439 HIST2H2BEQ16778 126 aa10.32□□□□□ -0.76
CNOT9-205ENST00000433439 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.32□□□□□ -0.76
CNOT9-205ENST00000433439 ENHOQ6UWT2 76 aa10.32□□□□□ -0.76
CNOT9-205ENST00000433439 Q6ZUT4 128 aa10.32□□□□□ -0.76
CNOT9-205ENST00000433439 HIST1H2BHQ93079 126 aa10.32□□□□□ -0.76
CNOT9-205ENST00000433439 HIST1H2BNQ99877 126 aa10.32□□□□□ -0.76
CNOT9-205ENST00000433439 HIST1H2BMQ99879 126 aa10.32□□□□□ -0.76
CNOT9-205ENST00000433439 SPANXA1Q9NS26 97 aa10.32□□□□□ -0.76
CNOT9-205ENST00000433439 LYSTQ99698 3801 aa10.32□□□□□ -0.76
CNOT9-205ENST00000433439 TRAV8-3A0A0A6YYJ7 113 aa10.31□□□□□ -0.76
CNOT9-205ENST00000433439 HSBP1O75506 76 aa10.31□□□□□ -0.76
CNOT9-205ENST00000433439 SERF1AO75920 110 aa10.31□□□□□ -0.76
CNOT9-205ENST00000433439 ZNF664Q8N3J9 261 aa10.31□□□□□ -0.76
CNOT9-205ENST00000433439 CHCHD1Q96BP2 118 aaKnown RBP10.31□□□□□ -0.76
CNOT9-205ENST00000433439 TIMM21Q9BVV7 248 aa10.31□□□□□ -0.76
CNOT9-205ENST00000433439 CDC42SE2Q9NRR3 84 aa10.31□□□□□ -0.76
CNOT9-205ENST00000433439 VPS13DQ5THJ4 4388 aa10.31□□□□□ -0.76
CNOT9-205ENST00000433439 IGLV10-54A0A075B6I4 117 aa10.3□□□□□ -0.76
CNOT9-205ENST00000433439 IGKV2D-24A0A075B6R9 120 aa10.3□□□□□ -0.76
CNOT9-205ENST00000433439 TOMM6Q96B49 74 aa10.3□□□□□ -0.76
CNOT9-205ENST00000433439 SCGB3A1Q96QR1 104 aa10.3□□□□□ -0.76
CNOT9-205ENST00000433439 HBDP02042 147 aa10.29□□□□□ -0.76
CNOT9-205ENST00000433439 FAM19A2Q8N3H0 131 aa10.29□□□□□ -0.76
CNOT9-205ENST00000433439 C1orf43Q9BWL3 253 aa10.29□□□□□ -0.76
CNOT9-205ENST00000433439 CSDC2Q9Y534 153 aaKnown RBP10.29□□□□□ -0.76
CNOT9-205ENST00000433439 PSCAO43653 123 aa10.28□□□□□ -0.76
CNOT9-205ENST00000433439 NDUFA6P56556 154 aa10.28□□□□□ -0.76
CNOT9-205ENST00000433439 MIAQ16674 131 aa10.28□□□□□ -0.76
CNOT9-205ENST00000433439 NFE4Q86UQ8 179 aa10.28□□□□□ -0.76
CNOT9-205ENST00000433439 RMI2Q96E14 147 aa10.28□□□□□ -0.76
CNOT9-205ENST00000433439 PRR34Q9NV39 138 aa10.28□□□□□ -0.76
CNOT9-205ENST00000433439 DNAH1Q9P2D7 4330 aa10.28□□□□□ -0.76
CNOT9-205ENST00000433439 IGLV4-3A0A075B6K6 122 aa10.27□□□□□ -0.77
CNOT9-205ENST00000433439 A0A096LNJ9 63 aa10.27□□□□□ -0.77
CNOT9-205ENST00000433439 TRAV13-1A0A0B4J241 112 aa10.27□□□□□ -0.77
CNOT9-205ENST00000433439 IGIPA6NJ69 53 aa10.27□□□□□ -0.77
CNOT9-205ENST00000433439 NUPR1O60356 82 aa10.27□□□□□ -0.77
CNOT9-205ENST00000433439 LINC00310P59036 64 aa10.27□□□□□ -0.77
CNOT9-205ENST00000433439 ZC2HC1BQ5TFG8 222 aa10.27□□□□□ -0.77
CNOT9-205ENST00000433439 Q6ZN92 141 aa10.27□□□□□ -0.77
CNOT9-205ENST00000433439 TMEM141Q96I45 108 aa10.27□□□□□ -0.77
CNOT9-205ENST00000433439 PYGO1Q9Y3Y4 419 aa10.27□□□□□ -0.77
CNOT9-205ENST00000433439 MRPS36P82909 103 aaKnown RBP10.26□□□□□ -0.77
CNOT9-205ENST00000433439 ERASQ7Z444 233 aa10.26□□□□□ -0.77
CNOT9-205ENST00000433439 FAM104AQ969W3 186 aa10.26□□□□□ -0.77
CNOT9-205ENST00000433439 TM2D2Q9BX73 214 aa10.26□□□□□ -0.77
CNOT9-205ENST00000433439 LINC00959A0A1B0GUT2 108 aa10.25□□□□□ -0.77
CNOT9-205ENST00000433439 LINC01549A6NIU2 74 aa10.25□□□□□ -0.77
CNOT9-205ENST00000433439 IFITM10A6NMD0 228 aa10.25□□□□□ -0.77
CNOT9-205ENST00000433439 RTL8CO15255 209 aa10.25□□□□□ -0.77
CNOT9-205ENST00000433439 SS18Q15532 418 aa10.25□□□□□ -0.77
CNOT9-205ENST00000433439 TEX43Q6ZNM6 134 aa10.25□□□□□ -0.77
CNOT9-205ENST00000433439 TIMM17AQ99595 171 aa10.25□□□□□ -0.77
CNOT9-205ENST00000433439 VCX2Q9H322 139 aa10.25□□□□□ -0.77
CNOT9-205ENST00000433439 Q6ZRN7 208 aaPredicted RBP10.24□□□□□ -0.77
CNOT9-205ENST00000433439 HERC2O95714 4834 aa10.24□□□□□ -0.77
CNOT9-205ENST00000433439 TRAV8-4A0A0B4J246 113 aa10.23□□□□□ -0.77
CNOT9-205ENST00000433439 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.23□□□□□ -0.77
CNOT9-205ENST00000433439 CCL25O15444 150 aa10.23□□□□□ -0.77
CNOT9-205ENST00000433439 XCL1P47992 114 aa10.23□□□□□ -0.77
CNOT9-205ENST00000433439 PDZD11Q5EBL8 140 aa10.23□□□□□ -0.77
CNOT9-205ENST00000433439 PAPPA-AS1Q5QFB9 102 aa10.23□□□□□ -0.77
CNOT9-205ENST00000433439 CHCHD10Q8WYQ3 142 aaPredicted RBP10.23□□□□□ -0.77
CNOT9-205ENST00000433439 C2orf88Q9BSF0 95 aa10.23□□□□□ -0.77
CNOT9-205ENST00000433439 GAGE12HA6NDE8 117 aa10.22□□□□□ -0.77
CNOT9-205ENST00000433439 ATP5LO75964 103 aa10.22□□□□□ -0.77
CNOT9-205ENST00000433439 FABP4P15090 132 aa10.22□□□□□ -0.77
CNOT9-205ENST00000433439 COX11Q9Y6N1 276 aa10.22□□□□□ -0.77
CNOT9-205ENST00000433439 LECT2O14960 151 aa10.21□□□□□ -0.77
CNOT9-205ENST00000433439 TNP2Q05952 138 aa10.21□□□□□ -0.77
CNOT9-205ENST00000433439 LINC00173Q6ZV60 143 aa10.21□□□□□ -0.77
CNOT9-205ENST00000433439 BAALCQ8WXS3 180 aa10.21□□□□□ -0.77
CNOT9-205ENST00000433439 KMT2AQ03164 3969 aa10.2□□□□□ -0.78
CNOT9-205ENST00000433439 PRSS29PA6NIE9 313 aa10.2□□□□□ -0.78
CNOT9-205ENST00000433439 LEPROTL1O95214 131 aa10.2□□□□□ -0.78
CNOT9-205ENST00000433439 NPSP0C0P6 89 aa10.2□□□□□ -0.78
CNOT9-205ENST00000433439 MAPKAPK5-AS1Q8N8E1 139 aa10.2□□□□□ -0.78
CNOT9-205ENST00000433439 AMELXQ99217 191 aa10.2□□□□□ -0.78
CNOT9-205ENST00000433439 PRSS1P07477 247 aa10.19□□□□□ -0.78
CNOT9-205ENST00000433439 PMVKQ15126 192 aa10.19□□□□□ -0.78
CNOT9-205ENST00000433439 IFI27L1Q96BM0 104 aa10.19□□□□□ -0.78
CNOT9-205ENST00000433439 DNAH6Q9C0G6 4158 aa10.18□□□□□ -0.78
CNOT9-205ENST00000433439 H0Y8G0 127 aa10.18□□□□□ -0.78
CNOT9-205ENST00000433439 S100A6P06703 90 aa10.18□□□□□ -0.78
CNOT9-205ENST00000433439 UBE2D1P51668 147 aa10.18□□□□□ -0.78
CNOT9-205ENST00000433439 COA6Q5JTJ3 125 aaKnown RBP10.18□□□□□ -0.78
CNOT9-205ENST00000433439 KRTAP26-1Q6PEX3 210 aa10.18□□□□□ -0.78
CNOT9-205ENST00000433439 LINC00336Q6ZUF6 198 aa10.17□□□□□ -0.78
CNOT9-205ENST00000433439 CST9LQ9H4G1 147 aa10.17□□□□□ -0.78
CNOT9-205ENST00000433439 HSPB8Q9UJY1 196 aa10.17□□□□□ -0.78
CNOT9-205ENST00000433439 A0A0J9YXV3 536 aa10.16□□□□□ -0.78
CNOT9-205ENST00000433439 FOXI1Q12951 378 aa10.16□□□□□ -0.78
CNOT9-205ENST00000433439 WFDC2Q14508 124 aa10.16□□□□□ -0.78
CNOT9-205ENST00000433439 LINC00242Q5T6M2 205 aa10.16□□□□□ -0.78
CNOT9-205ENST00000433439 CD164L2Q6UWJ8 174 aa10.16□□□□□ -0.78
CNOT9-205ENST00000433439 C5orf38Q86SI9 138 aa10.16□□□□□ -0.78
CNOT9-205ENST00000433439 A0A087WTM6 91 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms