RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 TIMM17BO60830 172 aa8.38□□□□□ -1.07
HMGCS1-202ENST00000433297 DNAL4O96015 105 aa8.37□□□□□ -1.07
HMGCS1-202ENST00000433297 PEMTQ9UBM1 199 aa8.37□□□□□ -1.07
HMGCS1-202ENST00000433297 A0A1B0GX51 115 aa8.37□□□□□ -1.07
HMGCS1-202ENST00000433297 C14orf132Q9NPU4 83 aa8.37□□□□□ -1.07
HMGCS1-202ENST00000433297 A0A087WVE0 104 aa8.37□□□□□ -1.07
HMGCS1-202ENST00000433297 K7EQG2 157 aa8.36□□□□□ -1.07
HMGCS1-202ENST00000433297 CYSTM1Q9H1C7 97 aa8.36□□□□□ -1.07
HMGCS1-202ENST00000433297 SMIM9A6NGZ8 99 aa8.36□□□□□ -1.07
HMGCS1-202ENST00000433297 K7EMT4 169 aa8.36□□□□□ -1.07
HMGCS1-202ENST00000433297 TRACP01848 142 aa8.36□□□□□ -1.07
HMGCS1-202ENST00000433297 INAFM2P0DMQ5 153 aa8.36□□□□□ -1.07
HMGCS1-202ENST00000433297 MALP21145 153 aa8.36□□□□□ -1.07
HMGCS1-202ENST00000433297 IGKV3OR2-268A0A0C4DH90 116 aa8.35□□□□□ -1.07
HMGCS1-202ENST00000433297 DEFB131AP59861 70 aa8.35□□□□□ -1.07
HMGCS1-202ENST00000433297 IGHV3OR16-12A0A075B7B8 117 aa8.35□□□□□ -1.07
HMGCS1-202ENST00000433297 LY6DQ14210 128 aa8.35□□□□□ -1.07
HMGCS1-202ENST00000433297 KIR2DL5BQ8NHK3 375 aa8.35□□□□□ -1.07
HMGCS1-202ENST00000433297 TOMM7Q9P0U1 55 aa8.35□□□□□ -1.07
HMGCS1-202ENST00000433297 H3BUA1 57 aa8.35□□□□□ -1.07
HMGCS1-202ENST00000433297 ATP5G1P05496 136 aa8.35□□□□□ -1.07
HMGCS1-202ENST00000433297 C5orf47Q569G3 176 aa8.35□□□□□ -1.07
HMGCS1-202ENST00000433297 LINC00242Q5T6M2 205 aa8.35□□□□□ -1.07
HMGCS1-202ENST00000433297 CFHR3Q02985 330 aa8.34□□□□□ -1.07
HMGCS1-202ENST00000433297 C5orf38Q86SI9 138 aa8.34□□□□□ -1.07
HMGCS1-202ENST00000433297 CSMD2Q7Z408 3487 aa8.34□□□□□ -1.07
HMGCS1-202ENST00000433297 IGF2RP11717 2491 aa8.34□□□□□ -1.07
HMGCS1-202ENST00000433297 ATOX1O00244 68 aa8.34□□□□□ -1.07
HMGCS1-202ENST00000433297 IGLV1-40P01703 118 aa8.34□□□□□ -1.07
HMGCS1-202ENST00000433297 C9orf129Q5T035 196 aaKnown RBP8.34□□□□□ -1.07
HMGCS1-202ENST00000433297 C2orf48Q96LS8 159 aa8.33□□□□□ -1.08
HMGCS1-202ENST00000433297 PIMREGQ9BSJ6 248 aa8.33□□□□□ -1.08
HMGCS1-202ENST00000433297 C22orf24Q9Y442 160 aa8.33□□□□□ -1.08
HMGCS1-202ENST00000433297 IGHV3-53P01767 116 aa8.33□□□□□ -1.08
HMGCS1-202ENST00000433297 CRPP02741 224 aa8.33□□□□□ -1.08
HMGCS1-202ENST00000433297 CXCL5P42830 114 aa8.33□□□□□ -1.08
HMGCS1-202ENST00000433297 HIST1H4AP62805 103 aaKnown RBP8.33□□□□□ -1.08
HMGCS1-202ENST00000433297 BEAN1Q3B7T3 259 aa8.33□□□□□ -1.08
HMGCS1-202ENST00000433297 HIST2H2BCQ6DN03 193 aa8.33□□□□□ -1.08
HMGCS1-202ENST00000433297 HIST2H2BDQ6DRA6 164 aa8.33□□□□□ -1.08
HMGCS1-202ENST00000433297 LRRC75A-AS1Q8N1F1 130 aa8.33□□□□□ -1.08
HMGCS1-202ENST00000433297 COPS9Q8WXC6 57 aa8.33□□□□□ -1.08
HMGCS1-202ENST00000433297 A6NDX4 124 aa8.32□□□□□ -1.08
HMGCS1-202ENST00000433297 SMIM1B2RUZ4 78 aa8.32□□□□□ -1.08
HMGCS1-202ENST00000433297 DSCR8Q96T75 97 aa8.32□□□□□ -1.08
HMGCS1-202ENST00000433297 IGHV4-61A0A0C4DH41 118 aa8.32□□□□□ -1.08
HMGCS1-202ENST00000433297 A0A087WYN8 130 aa8.31□□□□□ -1.08
HMGCS1-202ENST00000433297 SLPIP03973 132 aa8.31□□□□□ -1.08
HMGCS1-202ENST00000433297 OR13C6PQ8NH95 151 aa8.31□□□□□ -1.08
HMGCS1-202ENST00000433297 CRYGAP11844 174 aa8.31□□□□□ -1.08
HMGCS1-202ENST00000433297 ZNF415Q09FC8 603 aa8.31□□□□□ -1.08
HMGCS1-202ENST00000433297 K7ENP7 123 aa8.31□□□□□ -1.08
HMGCS1-202ENST00000433297 LINC00846Q9NV44 126 aa8.31□□□□□ -1.08
HMGCS1-202ENST00000433297 NCR3O14931 201 aa8.3□□□□□ -1.08
HMGCS1-202ENST00000433297 LINC00158P58513 81 aa8.3□□□□□ -1.08
HMGCS1-202ENST00000433297 RPL18AQ02543 176 aaKnown RBP8.3□□□□□ -1.08
HMGCS1-202ENST00000433297 MIR7-3HGQ8N6C7 128 aa8.3□□□□□ -1.08
HMGCS1-202ENST00000433297 IGLV5-39A0A0G2JS06 123 aa8.3□□□□□ -1.08
HMGCS1-202ENST00000433297 SND1-IT1Q9HBX3 110 aa8.3□□□□□ -1.08
HMGCS1-202ENST00000433297 ABCA2Q9BZC7 2435 aa8.3□□□□□ -1.08
HMGCS1-202ENST00000433297 HIVEP3Q5T1R4 2406 aa8.29□□□□□ -1.08
HMGCS1-202ENST00000433297 LINC00337Q8N6G1 96 aa8.29□□□□□ -1.08
HMGCS1-202ENST00000433297 RNF152Q8N8N0 203 aa8.29□□□□□ -1.08
HMGCS1-202ENST00000433297 IGLV5-45A0A087WSX0 123 aa8.29□□□□□ -1.08
HMGCS1-202ENST00000433297 LECT2O14960 151 aa8.29□□□□□ -1.08
HMGCS1-202ENST00000433297 DEFB136Q30KP8 78 aa8.29□□□□□ -1.08
HMGCS1-202ENST00000433297 TRAV13-2A0A0B4J235 113 aa8.28□□□□□ -1.08
HMGCS1-202ENST00000433297 IGHV4-59P01825 116 aa8.28□□□□□ -1.08
HMGCS1-202ENST00000433297 PSMB8P28062 276 aa8.28□□□□□ -1.08
HMGCS1-202ENST00000433297 PFN2P35080 140 aa8.28□□□□□ -1.08
HMGCS1-202ENST00000433297 SMIM11BQ8TCY0 68 aa8.28□□□□□ -1.08
HMGCS1-202ENST00000433297 WFDC9Q8NEX5 89 aa8.28□□□□□ -1.08
HMGCS1-202ENST00000433297 TRGV1A0A0A0MS02 117 aa8.27□□□□□ -1.08
HMGCS1-202ENST00000433297 RBMY1BA6NDE4 496 aaKnown RBP8.27□□□□□ -1.08
HMGCS1-202ENST00000433297 RBMY1EA6NEQ0 496 aaKnown RBP8.27□□□□□ -1.08
HMGCS1-202ENST00000433297 RBMY1DP0C7P1 496 aaKnown RBP8.27□□□□□ -1.08
HMGCS1-202ENST00000433297 UBE2E2Q96LR5 201 aa8.27□□□□□ -1.08
HMGCS1-202ENST00000433297 KHDC1LQ5JSQ8 128 aa8.27□□□□□ -1.09
HMGCS1-202ENST00000433297 FAM222AQ5U5X8 452 aa8.27□□□□□ -1.09
HMGCS1-202ENST00000433297 DPH3Q96FX2 82 aa8.27□□□□□ -1.09
HMGCS1-202ENST00000433297 XCL2Q9UBD3 114 aa8.27□□□□□ -1.09
HMGCS1-202ENST00000433297 USP17L23D6RBM5 183 aa8.27□□□□□ -1.09
HMGCS1-202ENST00000433297 RNASE1P07998 156 aaKnown RBP8.27□□□□□ -1.09
HMGCS1-202ENST00000433297 RPL36AP83881 106 aaKnown RBP8.27□□□□□ -1.09
HMGCS1-202ENST00000433297 RPL36ALQ969Q0 106 aaKnown RBP8.27□□□□□ -1.09
HMGCS1-202ENST00000433297 PAX4O43316 350 aa8.26□□□□□ -1.09
HMGCS1-202ENST00000433297 SERP2Q8N6R1 65 aa8.26□□□□□ -1.09
HMGCS1-202ENST00000433297 Q96MF0 132 aa8.26□□□□□ -1.09
HMGCS1-202ENST00000433297 C11orf68Q9H3H3 251 aaKnown RBP8.26□□□□□ -1.09
HMGCS1-202ENST00000433297 RPL28P46779 137 aaKnown RBP8.26□□□□□ -1.09
HMGCS1-202ENST00000433297 UBE2L6O14933 153 aa8.26□□□□□ -1.09
HMGCS1-202ENST00000433297 AVPP01185 164 aa8.26□□□□□ -1.09
HMGCS1-202ENST00000433297 C4orf26Q17RF5 130 aa8.26□□□□□ -1.09
HMGCS1-202ENST00000433297 SLURP1P55000 103 aa8.25□□□□□ -1.09
HMGCS1-202ENST00000433297 IGKV2-28A0A075B6P5 120 aa8.25□□□□□ -1.09
HMGCS1-202ENST00000433297 IGKV2D-28P01615 120 aa8.25□□□□□ -1.09
HMGCS1-202ENST00000433297 HILS1P60008 231 aa8.25□□□□□ -1.09
HMGCS1-202ENST00000433297 LINC01561Q8N1V8 128 aa8.25□□□□□ -1.09
HMGCS1-202ENST00000433297 HRCT1Q6UXD1 115 aa8.24□□□□□ -1.09
HMGCS1-202ENST00000433297 TRAV23DV6A0A075B6W5 121 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms