RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 PRB2P02812 416 aaPredicted RBP9.27□□□□□ -0.93
LRRTM1-206ENST00000433224 CRYBA4P53673 196 aa9.27□□□□□ -0.93
LRRTM1-206ENST00000433224 C9orf66Q5T8R8 295 aa9.27□□□□□ -0.93
LRRTM1-206ENST00000433224 NEXN-AS1Q8NBZ9 246 aa9.27□□□□□ -0.93
LRRTM1-206ENST00000433224 IFITM1P13164 125 aa9.27□□□□□ -0.93
LRRTM1-206ENST00000433224 LINC01620Q4KN68 170 aa9.26□□□□□ -0.93
LRRTM1-206ENST00000433224 DCANP1Q8TF63 244 aa9.26□□□□□ -0.93
LRRTM1-206ENST00000433224 PRSS47A8MTI9 375 aa9.26□□□□□ -0.93
LRRTM1-206ENST00000433224 TMEM86BQ8N661 226 aa9.26□□□□□ -0.93
LRRTM1-206ENST00000433224 LEPROTO15243 131 aa9.26□□□□□ -0.93
LRRTM1-206ENST00000433224 COL6A5A8TX70 2615 aa9.25□□□□□ -0.93
LRRTM1-206ENST00000433224 NOTCH1P46531 2555 aa9.25□□□□□ -0.93
LRRTM1-206ENST00000433224 RHOHQ15669 191 aa9.25□□□□□ -0.93
LRRTM1-206ENST00000433224 RNASE3P12724 160 aaKnown RBP9.25□□□□□ -0.93
LRRTM1-206ENST00000433224 Q6ZUT4 128 aa9.25□□□□□ -0.93
LRRTM1-206ENST00000433224 FAM110AQ9BQ89 295 aa9.25□□□□□ -0.93
LRRTM1-206ENST00000433224 CLEC2BQ92478 149 aa9.24□□□□□ -0.93
LRRTM1-206ENST00000433224 ITPR2Q14571 2701 aa9.24□□□□□ -0.93
LRRTM1-206ENST00000433224 NBEAL1Q6ZS30 2694 aa9.24□□□□□ -0.93
LRRTM1-206ENST00000433224 RNF183Q96D59 192 aa9.24□□□□□ -0.93
LRRTM1-206ENST00000433224 Q9H8V8 135 aa9.24□□□□□ -0.93
LRRTM1-206ENST00000433224 ZANQ9Y493 2812 aa9.23□□□□□ -0.93
LRRTM1-206ENST00000433224 LGALS9O00182 355 aa9.23□□□□□ -0.93
LRRTM1-206ENST00000433224 TIMM17AQ99595 171 aa9.23□□□□□ -0.93
LRRTM1-206ENST00000433224 Q9HAA7 133 aa9.23□□□□□ -0.93
LRRTM1-206ENST00000433224 SS18Q15532 418 aa9.23□□□□□ -0.93
LRRTM1-206ENST00000433224 UBE2DNLQ8IWF7 75 aa9.23□□□□□ -0.93
LRRTM1-206ENST00000433224 HIST1H4AP62805 103 aaKnown RBP9.22□□□□□ -0.93
LRRTM1-206ENST00000433224 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.22□□□□□ -0.93
LRRTM1-206ENST00000433224 EDA2RQ9HAV5 297 aa9.22□□□□□ -0.93
LRRTM1-206ENST00000433224 CRYBG3Q68DQ2 2970 aa9.22□□□□□ -0.93
LRRTM1-206ENST00000433224 RBMY1BA6NDE4 496 aaKnown RBP9.21□□□□□ -0.93
LRRTM1-206ENST00000433224 RBMY1EA6NEQ0 496 aaKnown RBP9.21□□□□□ -0.93
LRRTM1-206ENST00000433224 RBMY1DP0C7P1 496 aaKnown RBP9.21□□□□□ -0.93
LRRTM1-206ENST00000433224 RBMY1A1P0DJD3 496 aaKnown RBP9.21□□□□□ -0.93
LRRTM1-206ENST00000433224 RBMY1CP0DJD4 496 aa9.21□□□□□ -0.93
LRRTM1-206ENST00000433224 HILS1P60008 231 aa9.21□□□□□ -0.93
LRRTM1-206ENST00000433224 OXLD1Q5BKU9 147 aa9.21□□□□□ -0.93
LRRTM1-206ENST00000433224 TRBV7-3A0A075B6L6 115 aa9.21□□□□□ -0.93
LRRTM1-206ENST00000433224 IGHV3-30-3P0DP02 117 aa9.21□□□□□ -0.93
LRRTM1-206ENST00000433224 C20orf203Q8NBC4 194 aa9.21□□□□□ -0.94
LRRTM1-206ENST00000433224 ICOSQ9Y6W8 199 aa9.21□□□□□ -0.94
LRRTM1-206ENST00000433224 K7EQD1 137 aa9.21□□□□□ -0.94
LRRTM1-206ENST00000433224 C9orf153Q5TBE3 101 aa9.21□□□□□ -0.94
LRRTM1-206ENST00000433224 SMIM20Q8N5G0 67 aa9.2□□□□□ -0.94
LRRTM1-206ENST00000433224 C16orf74Q96GX8 76 aa9.2□□□□□ -0.94
LRRTM1-206ENST00000433224 CNFNQ9BYD5 112 aa9.2□□□□□ -0.94
LRRTM1-206ENST00000433224 TRAV25A0A0B4J276 109 aa9.2□□□□□ -0.94
LRRTM1-206ENST00000433224 TEX49A0A1B0GTD5 131 aa9.2□□□□□ -0.94
LRRTM1-206ENST00000433224 IGHV3-30P01768 117 aa9.2□□□□□ -0.94
LRRTM1-206ENST00000433224 IGHV3-33P01772 117 aa9.2□□□□□ -0.94
LRRTM1-206ENST00000433224 IGHV3-30-5P0DP03 117 aa9.2□□□□□ -0.94
LRRTM1-206ENST00000433224 ATP6V0E2Q8NHE4 81 aa9.2□□□□□ -0.94
LRRTM1-206ENST00000433224 COL27A1Q8IZC6 1860 aaPredicted RBP9.2□□□□□ -0.94
LRRTM1-206ENST00000433224 ZFHX4Q86UP3 3567 aa9.19□□□□□ -0.94
LRRTM1-206ENST00000433224 ODF3L2Q3SX64 289 aa9.19□□□□□ -0.94
LRRTM1-206ENST00000433224 SLC25A29Q8N8R3 303 aa9.19□□□□□ -0.94
LRRTM1-206ENST00000433224 FAM222AQ5U5X8 452 aa9.19□□□□□ -0.94
LRRTM1-206ENST00000433224 ASH1LQ9NR48 2969 aaKnown RBP9.19□□□□□ -0.94
LRRTM1-206ENST00000433224 CLUHP3Q96NS8 147 aa9.19□□□□□ -0.94
LRRTM1-206ENST00000433224 A8MZ25 164 aa9.18□□□□□ -0.94
LRRTM1-206ENST00000433224 S100A7L2Q5SY68 101 aa9.18□□□□□ -0.94
LRRTM1-206ENST00000433224 TMEM263Q8WUH6 116 aaKnown RBP9.18□□□□□ -0.94
LRRTM1-206ENST00000433224 XGP55808 180 aa9.18□□□□□ -0.94
LRRTM1-206ENST00000433224 UTP20O75691 2785 aaKnown RBP9.18□□□□□ -0.94
LRRTM1-206ENST00000433224 CFAP126Q5VTH2 177 aa9.18□□□□□ -0.94
LRRTM1-206ENST00000433224 LOC100131303A0A0U1RQF7 123 aa9.17□□□□□ -0.94
LRRTM1-206ENST00000433224 KLLNB2CW77 178 aa9.17□□□□□ -0.94
LRRTM1-206ENST00000433224 SPART-AS1P0CW21 52 aa9.17□□□□□ -0.94
LRRTM1-206ENST00000433224 MED14OSP0DP75 135 aa9.17□□□□□ -0.94
LRRTM1-206ENST00000433224 VSIG2Q96IQ7 327 aa9.17□□□□□ -0.94
LRRTM1-206ENST00000433224 A0A0J9YXY3 114 aa9.17□□□□□ -0.94
LRRTM1-206ENST00000433224 ZNF22P17026 224 aaPredicted RBP9.17□□□□□ -0.94
LRRTM1-206ENST00000433224 NBEAL2Q6ZNJ1 2754 aa9.17□□□□□ -0.94
LRRTM1-206ENST00000433224 ATP5G1P05496 136 aa9.16□□□□□ -0.94
LRRTM1-206ENST00000433224 PSCAO43653 123 aa9.16□□□□□ -0.94
LRRTM1-206ENST00000433224 BAALC-AS2P0C853 105 aa9.16□□□□□ -0.94
LRRTM1-206ENST00000433224 ZMAT4Q9H898 229 aa9.16□□□□□ -0.94
LRRTM1-206ENST00000433224 TINCRA0A1B0GVN0 87 aa9.15□□□□□ -0.94
LRRTM1-206ENST00000433224 M0QY20 66 aa9.15□□□□□ -0.94
LRRTM1-206ENST00000433224 LINC00467Q9BRT7 94 aa9.15□□□□□ -0.94
LRRTM1-206ENST00000433224 TRBV10-2A0A0K0K1G8 114 aa9.15□□□□□ -0.94
LRRTM1-206ENST00000433224 HERVK_113P63121 156 aa9.15□□□□□ -0.95
LRRTM1-206ENST00000433224 RNF152Q8N8N0 203 aa9.15□□□□□ -0.95
LRRTM1-206ENST00000433224 NFE4Q86UQ8 179 aa9.14□□□□□ -0.95
LRRTM1-206ENST00000433224 SPANXA1Q9NS26 97 aa9.14□□□□□ -0.95
LRRTM1-206ENST00000433224 IGLV4-3A0A075B6K6 122 aa9.14□□□□□ -0.95
LRRTM1-206ENST00000433224 IGKV2D-24A0A075B6R9 120 aa9.14□□□□□ -0.95
LRRTM1-206ENST00000433224 SPATA25Q9BR10 227 aa9.14□□□□□ -0.95
LRRTM1-206ENST00000433224 KLK12Q9UKR0 248 aa9.14□□□□□ -0.95
LRRTM1-206ENST00000433224 IGLV2-18A0A075B6J9 118 aa9.14□□□□□ -0.95
LRRTM1-206ENST00000433224 FAM236AA0A1B0GUQ0 79 aa9.14□□□□□ -0.95
LRRTM1-206ENST00000433224 FAM236BA0A1B0GV22 79 aa9.14□□□□□ -0.95
LRRTM1-206ENST00000433224 TRIAP1O43715 76 aa9.14□□□□□ -0.95
LRRTM1-206ENST00000433224 CRYGDP07320 174 aa9.14□□□□□ -0.95
LRRTM1-206ENST00000433224 IGHV1-58A0A0C4DH39 117 aa9.13□□□□□ -0.95
LRRTM1-206ENST00000433224 ZNF561-AS1K7EIQ3 104 aa9.13□□□□□ -0.95
LRRTM1-206ENST00000433224 INAFM2P0DMQ5 153 aa9.13□□□□□ -0.95
LRRTM1-206ENST00000433224 CRIP2P52943 208 aaPredicted RBP9.13□□□□□ -0.95
LRRTM1-206ENST00000433224 CDKN2A-AS1Q9UH64 79 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms