RNA–Protein interactions for RNA: ENST00000431737.1

LINC00840-201, long intergenic non-protein coding RNA 840, humanhuman

TSL 2 BASIC

Gene LINC00840, Length 1,974 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00840-201ENST00000431737 FAM19A3Q7Z5A8 133 aa8.97□□□□□ -0.97
LINC00840-201ENST00000431737 PLEKHB2Q96CS7 222 aa8.97□□□□□ -0.97
LINC00840-201ENST00000431737 FLNBO75369 2602 aaKnown RBP8.96□□□□□ -0.97
LINC00840-201ENST00000431737 SMIM13P0DJ93 91 aa8.96□□□□□ -0.98
LINC00840-201ENST00000431737 HIST1H4GQ99525 98 aa8.96□□□□□ -0.98
LINC00840-201ENST00000431737 SPANXB1Q9NS25 103 aaPredicted RBP8.96□□□□□ -0.98
LINC00840-201ENST00000431737 IGLV5-45A0A087WSX0 123 aa8.95□□□□□ -0.98
LINC00840-201ENST00000431737 A0A0J9YY99 117 aa8.95□□□□□ -0.98
LINC00840-201ENST00000431737 GAGE12JA6NER3 117 aa8.95□□□□□ -0.98
LINC00840-201ENST00000431737 K7EP13 123 aa8.95□□□□□ -0.98
LINC00840-201ENST00000431737 CCL25O15444 150 aa8.95□□□□□ -0.98
LINC00840-201ENST00000431737 UBE2D1P51668 147 aa8.95□□□□□ -0.98
LINC00840-201ENST00000431737 GAGE4Q13068 117 aa8.95□□□□□ -0.98
LINC00840-201ENST00000431737 GAGE5Q13069 117 aa8.95□□□□□ -0.98
LINC00840-201ENST00000431737 GAGE13Q4V321 117 aa8.95□□□□□ -0.98
LINC00840-201ENST00000431737 H7C423 109 aa8.95□□□□□ -0.98
LINC00840-201ENST00000431737 LGALS3P17931 250 aaKnown RBP8.95□□□□□ -0.98
LINC00840-201ENST00000431737 APOC4P55056 127 aa8.95□□□□□ -0.98
LINC00840-201ENST00000431737 VAMP3Q15836 100 aa8.95□□□□□ -0.98
LINC00840-201ENST00000431737 TRGV4A0A0C4DH28 118 aa8.94□□□□□ -0.98
LINC00840-201ENST00000431737 PTTG1IPP53801 180 aa8.94□□□□□ -0.98
LINC00840-201ENST00000431737 TIRAPP58753 221 aa8.94□□□□□ -0.98
LINC00840-201ENST00000431737 SCGB1D4Q6XE38 83 aa8.94□□□□□ -0.98
LINC00840-201ENST00000431737 LYRM9A8MSI8 78 aa8.93□□□□□ -0.98
LINC00840-201ENST00000431737 IGHV1-58A0A0C4DH39 117 aa8.92□□□□□ -0.98
LINC00840-201ENST00000431737 RNASE13Q5GAN3 156 aaKnown RBP8.92□□□□□ -0.98
LINC00840-201ENST00000431737 AMMECR1LQ6DCA0 310 aa8.92□□□□□ -0.98
LINC00840-201ENST00000431737 DGAT2L7PQ6IED9 249 aa8.92□□□□□ -0.98
LINC00840-201ENST00000431737 TMEM243Q9BU79 118 aa8.92□□□□□ -0.98
LINC00840-201ENST00000431737 NHP2Q9NX24 153 aaKnown RBP8.92□□□□□ -0.98
LINC00840-201ENST00000431737 IGHV3-30-3P0DP02 117 aa8.92□□□□□ -0.98
LINC00840-201ENST00000431737 C12orf74Q32Q52 190 aa8.92□□□□□ -0.98
LINC00840-201ENST00000431737 LOC100131303A0A0U1RQF7 123 aa8.91□□□□□ -0.98
LINC00840-201ENST00000431737 A0A1W2PPM0 123 aa8.91□□□□□ -0.98
LINC00840-201ENST00000431737 H3BUT2 72 aa8.91□□□□□ -0.98
LINC00840-201ENST00000431737 VSIG2Q96IQ7 327 aa8.91□□□□□ -0.98
LINC00840-201ENST00000431737 CDC42SE2Q9NRR3 84 aa8.91□□□□□ -0.98
LINC00840-201ENST00000431737 K7ERJ3 54 aa8.9□□□□□ -0.98
LINC00840-201ENST00000431737 K7EP34 96 aa8.9□□□□□ -0.99
LINC00840-201ENST00000431737 HERVK_113P63121 156 aa8.9□□□□□ -0.99
LINC00840-201ENST00000431737 RAB37Q96AX2 223 aa8.9□□□□□ -0.99
LINC00840-201ENST00000431737 GEMIN7Q9H840 131 aaKnown RBP8.9□□□□□ -0.99
LINC00840-201ENST00000431737 IGHV3-30P01768 117 aa8.89□□□□□ -0.99
LINC00840-201ENST00000431737 IGHV3-30-5P0DP03 117 aa8.89□□□□□ -0.99
LINC00840-201ENST00000431737 LINC00242Q5T6M2 205 aa8.89□□□□□ -0.99
LINC00840-201ENST00000431737 C10orf126Q8N4M7 172 aa8.89□□□□□ -0.99
LINC00840-201ENST00000431737 TRBV6-8A0A0A6YYG3 113 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 IGLV5-39A0A0G2JS06 123 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 DEFB130BP0DP73 79 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 DEFB130AP0DP74 79 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 MIFP14174 115 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 SRSF9Q13242 221 aaKnown RBP eCLIP8.88□□□□□ -0.99
LINC00840-201ENST00000431737 DEFB135Q30KP9 77 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 KRTAP24-1Q3LI83 254 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 SAMD5Q5TGI4 173 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 GTF2H5Q6ZYL4 71 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 IGLL5B9A064 214 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 UBE2L6O14933 153 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 FAM222AQ5U5X8 452 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 ZFAND6Q6FIF0 208 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 Q8NAQ8 132 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 TMEM101Q96IK0 257 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 CDKN2A-AS1Q9UH64 79 aa8.88□□□□□ -0.99
LINC00840-201ENST00000431737 IGHV3-64A0A075B6Q5 118 aa8.87□□□□□ -0.99
LINC00840-201ENST00000431737 TRAV8-3A0A0A6YYJ7 113 aa8.87□□□□□ -0.99
LINC00840-201ENST00000431737 A0A0J9YXY3 114 aa8.87□□□□□ -0.99
LINC00840-201ENST00000431737 TMEM238C9JI98 176 aa8.87□□□□□ -0.99
LINC00840-201ENST00000431737 FABP2P12104 132 aa8.87□□□□□ -0.99
LINC00840-201ENST00000431737 PRO0255Q9UI72 69 aa8.87□□□□□ -0.99
LINC00840-201ENST00000431737 TRRAPQ9Y4A5 3859 aa8.86□□□□□ -0.99
LINC00840-201ENST00000431737 IGHV4-28A0A0C4DH34 117 aa8.86□□□□□ -0.99
LINC00840-201ENST00000431737 GAGE10A6NGK3 116 aa8.86□□□□□ -0.99
LINC00840-201ENST00000431737 IGHV4-30-4P0DP06 118 aa8.86□□□□□ -0.99
LINC00840-201ENST00000431737 RNF183Q96D59 192 aa8.86□□□□□ -0.99
LINC00840-201ENST00000431737 NBEAL2Q6ZNJ1 2754 aa8.86□□□□□ -0.99
LINC00840-201ENST00000431737 SPINK8P0C7L1 97 aa8.86□□□□□ -0.99
LINC00840-201ENST00000431737 LITAFQ99732 161 aa8.86□□□□□ -0.99
LINC00840-201ENST00000431737 COX6A2Q02221 97 aa8.85□□□□□ -0.99
LINC00840-201ENST00000431737 NAA38Q9BRA0 125 aaKnown RBP8.85□□□□□ -0.99
LINC00840-201ENST00000431737 NDUFA12Q9UI09 145 aa8.85□□□□□ -0.99
LINC00840-201ENST00000431737 A8MZ25 164 aa8.84□□□□□ -0.99
LINC00840-201ENST00000431737 TIMM17BO60830 172 aa8.84□□□□□ -0.99
LINC00840-201ENST00000431737 GYPEP15421 78 aa8.84□□□□□ -0.99
LINC00840-201ENST00000431737 EGFEM1PQ0D2K5 195 aa8.84□□□□□ -0.99
LINC00840-201ENST00000431737 C4orf48Q5BLP8 95 aa8.84□□□□□ -0.99
LINC00840-201ENST00000431737 SPCS1Q9Y6A9 102 aa8.84□□□□□ -0.99
LINC00840-201ENST00000431737 F5H768 121 aa8.84□□□□□ -0.99
LINC00840-201ENST00000431737 NDUFA1O15239 70 aa8.84□□□□□ -0.99
LINC00840-201ENST00000431737 ATP6V0E2Q8NHE4 81 aa8.84□□□□□ -0.99
LINC00840-201ENST00000431737 SPANXDQ9BXN6 97 aa8.84□□□□□ -0.99
LINC00840-201ENST00000431737 SPANXCQ9NY87 97 aa8.84□□□□□ -0.99
LINC00840-201ENST00000431737 SMIM1B2RUZ4 78 aa8.83□□□□□ -1
LINC00840-201ENST00000431737 SHISA2Q6UWI4 295 aa8.83□□□□□ -1
LINC00840-201ENST00000431737 TRAV26-1A0A087WT03 109 aa8.82□□□□□ -1
LINC00840-201ENST00000431737 TRAV13-1A0A0B4J241 112 aa8.82□□□□□ -1
LINC00840-201ENST00000431737 GAGE6Q13070 117 aa8.82□□□□□ -1
LINC00840-201ENST00000431737 PAX4O43316 350 aa8.81□□□□□ -1
LINC00840-201ENST00000431737 DAD1P61803 113 aa8.81□□□□□ -1
LINC00840-201ENST00000431737 RPL24P83731 157 aaKnown RBP8.81□□□□□ -1
LINC00840-201ENST00000431737 CHCHD5Q9BSY4 110 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms