RNA–Protein interactions for RNA: ENST00000431099.3

CBWD1-208, Transcript of COBW domain containing 1, human

TSL 5

Gene CBWD1, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-208	ENST00000431099	NTM-AS1	Q6ZSK4	140 aa		4.19	□□□□□ -1.74
CBWD1-208	ENST00000431099	FAM231D	Q6ZW35	169 aa		4.19	□□□□□ -1.74
CBWD1-208	ENST00000431099	SMIM15	Q7Z3B0	74 aa		4.19	□□□□□ -1.74
CBWD1-208	ENST00000431099	C15orf54	Q8N8G6	183 aa		4.19	□□□□□ -1.74
CBWD1-208	ENST00000431099	DEFB104A	Q8WTQ1	72 aa		4.19	□□□□□ -1.74
CBWD1-208	ENST00000431099	TMEM243	Q9BU79	118 aa		4.19	□□□□□ -1.74
CBWD1-208	ENST00000431099	TPPP3	Q9BW30	176 aa		4.19	□□□□□ -1.74
CBWD1-208	ENST00000431099	RPP21	Q9H633	154 aa	Known RBP	4.19	□□□□□ -1.74
CBWD1-208	ENST00000431099	PKHD1L1	Q86WI1	4243 aa		4.19	□□□□□ -1.74
CBWD1-208	ENST00000431099	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.18	□□□□□ -1.74
CBWD1-208	ENST00000431099		A8MWL6	223 aa		4.18	□□□□□ -1.74
CBWD1-208	ENST00000431099	SMR3B	P02814	79 aa	Predicted RBP	4.18	□□□□□ -1.74
CBWD1-208	ENST00000431099	CNBP	P62633	177 aa	Known RBP	4.18	□□□□□ -1.74
CBWD1-208	ENST00000431099	LYZL1	Q6UWQ5	148 aa		4.18	□□□□□ -1.74
CBWD1-208	ENST00000431099	AKAP14	Q86UN6	197 aa		4.18	□□□□□ -1.74
CBWD1-208	ENST00000431099	GFRA4	Q9GZZ7	299 aa		4.18	□□□□□ -1.74
CBWD1-208	ENST00000431099	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.17	□□□□□ -1.74
CBWD1-208	ENST00000431099	RAB19	A4D1S5	217 aa		4.17	□□□□□ -1.74
CBWD1-208	ENST00000431099	UBE2L6	O14933	153 aa		4.17	□□□□□ -1.74
CBWD1-208	ENST00000431099	LECT2	O14960	151 aa		4.17	□□□□□ -1.74
CBWD1-208	ENST00000431099	TSHB	P01222	138 aa		4.17	□□□□□ -1.74
CBWD1-208	ENST00000431099	PRSS1	P07477	247 aa		4.17	□□□□□ -1.74
CBWD1-208	ENST00000431099	REG3A	Q06141	175 aa		4.17	□□□□□ -1.74
CBWD1-208	ENST00000431099	COTL1	Q14019	142 aa		4.17	□□□□□ -1.74
CBWD1-208	ENST00000431099	SCX	Q7RTU7	201 aa		4.17	□□□□□ -1.74
CBWD1-208	ENST00000431099	LINC00269	Q8N2A0	174 aa		4.17	□□□□□ -1.74
CBWD1-208	ENST00000431099	C9orf163	Q8N9P6	203 aa		4.17	□□□□□ -1.74
CBWD1-208	ENST00000431099	OCC1	Q8TAD7	63 aa		4.17	□□□□□ -1.74
CBWD1-208	ENST00000431099	RNF185	Q96GF1	192 aa		4.17	□□□□□ -1.74
CBWD1-208	ENST00000431099	MUC21	A0A0G2JKD1	596 aa		4.16	□□□□□ -1.74
CBWD1-208	ENST00000431099	MUC21	A0A140T8X8	626 aa		4.16	□□□□□ -1.74
CBWD1-208	ENST00000431099		K7EN84	100 aa		4.16	□□□□□ -1.74
CBWD1-208	ENST00000431099	PPP1R17	O96001	155 aa		4.16	□□□□□ -1.74
CBWD1-208	ENST00000431099	MGP	P08493	103 aa		4.16	□□□□□ -1.74
CBWD1-208	ENST00000431099	ZNF25	P17030	456 aa	Predicted RBP	4.16	□□□□□ -1.74
CBWD1-208	ENST00000431099	NKX2-5	P52952	324 aa	Predicted RBP	4.16	□□□□□ -1.74
CBWD1-208	ENST00000431099	FAM74A3	Q4VXF1	159 aa		4.16	□□□□□ -1.74
CBWD1-208	ENST00000431099	KRTAP26-1	Q6PEX3	210 aa		4.16	□□□□□ -1.74
CBWD1-208	ENST00000431099	C20orf203	Q8NBC4	194 aa		4.16	□□□□□ -1.74
CBWD1-208	ENST00000431099	BORCS7	Q96B45	105 aa		4.16	□□□□□ -1.74
CBWD1-208	ENST00000431099	SMDT1	Q9H4I9	107 aa		4.16	□□□□□ -1.74
CBWD1-208	ENST00000431099	PKIG	Q9Y2B9	76 aa		4.16	□□□□□ -1.74
CBWD1-208	ENST00000431099	TRBV6-5	A0A0K0K1A5	114 aa		4.15	□□□□□ -1.75
CBWD1-208	ENST00000431099	OXT	P01178	125 aa		4.15	□□□□□ -1.75
CBWD1-208	ENST00000431099	HLA-DQA1	P01909	254 aa		4.15	□□□□□ -1.75
CBWD1-208	ENST00000431099	MT3	P25713	68 aa		4.15	□□□□□ -1.75
CBWD1-208	ENST00000431099	SST	P61278	116 aa		4.15	□□□□□ -1.75
CBWD1-208	ENST00000431099	SMAGP	Q0VAQ4	97 aa		4.15	□□□□□ -1.75
CBWD1-208	ENST00000431099	CIRBP	Q14011	172 aa	Known RBP	4.15	□□□□□ -1.75
CBWD1-208	ENST00000431099	STPG4	Q8N801	248 aa		4.15	□□□□□ -1.75
CBWD1-208	ENST00000431099	GATD1	Q8NB37	220 aa		4.15	□□□□□ -1.75
CBWD1-208	ENST00000431099	CIRBP-AS1	Q8TBR5	109 aa		4.15	□□□□□ -1.75
CBWD1-208	ENST00000431099	RNASE7	Q9H1E1	156 aa	Known RBP	4.15	□□□□□ -1.75
CBWD1-208	ENST00000431099		A0A1B0GUT8	65 aa		4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099	SMIM1	B2RUZ4	78 aa		4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099		I3L3M4	83 aa		4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099	CCL25	O15444	150 aa		4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099	GATC	O43716	136 aa	Known RBP	4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099	ALKAL2	Q6UX46	152 aa		4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099	SDIM1	Q6ZPB5	146 aa		4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099	TSKU	Q8WUA8	353 aa		4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099	GTSF1	Q8WW33	167 aa		4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099	MRAP2	Q96G30	205 aa		4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099	SMIM7	Q9BQ49	75 aa		4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099	TMEM191A	Q9H0A3	160 aa		4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099	OSTC	Q9NRP0	149 aa		4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099	LRP1	Q07954	4544 aa	Known RBP	4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099	FAT3	Q8TDW7	4589 aa		4.14	□□□□□ -1.75
CBWD1-208	ENST00000431099	IGLV4-60	A0A075B6I1	120 aa		4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099	IGHV3-64	A0A075B6Q5	118 aa		4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099	TRBV27	A0A0K0K1C4	114 aa		4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099		A0A1B0GW15	77 aa		4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099	SDHAF1	A6NFY7	115 aa		4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099	TCAP	O15273	167 aa		4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099	APCS	P02743	223 aa		4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099	KRTAP10-6	P60371	365 aa	Predicted RBP	4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099	AMMECR1L	Q6DCA0	310 aa		4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099	MRPL52	Q86TS9	123 aa	Known RBP	4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099	LINC01551	Q86U37	167 aa		4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099	BTF3L4	Q96K17	158 aa		4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099	EIF5A2	Q9GZV4	153 aa	Known RBP	4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099	LINC00474	Q9P2X8	69 aa		4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099	CSDC2	Q9Y534	153 aa	Known RBP	4.13	□□□□□ -1.75
CBWD1-208	ENST00000431099	ZNF727	A8MUV8	499 aa		4.12	□□□□□ -1.75
CBWD1-208	ENST00000431099	HIGD1C	A8MV81	97 aa		4.12	□□□□□ -1.75
CBWD1-208	ENST00000431099	PPP1R2P9	O14990	202 aa		4.12	□□□□□ -1.75
CBWD1-208	ENST00000431099	CFC1B	P0CG36	223 aa		4.12	□□□□□ -1.75
CBWD1-208	ENST00000431099	CFC1	P0CG37	223 aa		4.12	□□□□□ -1.75
CBWD1-208	ENST00000431099	KRTAP10-4	P60372	401 aa	Predicted RBP	4.12	□□□□□ -1.75
CBWD1-208	ENST00000431099	HAMP	P81172	84 aa		4.12	□□□□□ -1.75
CBWD1-208	ENST00000431099	RIG	Q13278	110 aa		4.12	□□□□□ -1.75
CBWD1-208	ENST00000431099	LINC01620	Q4KN68	170 aa		4.12	□□□□□ -1.75
CBWD1-208	ENST00000431099	OR5A1	Q8NGJ0	315 aa		4.12	□□□□□ -1.75
CBWD1-208	ENST00000431099	TMEM101	Q96IK0	257 aa		4.12	□□□□□ -1.75
CBWD1-208	ENST00000431099	ST20	Q9HBF5	79 aa		4.12	□□□□□ -1.75
CBWD1-208	ENST00000431099	IGLV10-54	A0A075B6I4	117 aa		4.11	□□□□□ -1.75
CBWD1-208	ENST00000431099	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.11	□□□□□ -1.75
CBWD1-208	ENST00000431099	LINC00862	A6NCI5	91 aa		4.11	□□□□□ -1.75
CBWD1-208	ENST00000431099	FGF6	P10767	208 aa		4.11	□□□□□ -1.75
CBWD1-208	ENST00000431099	ESD	P10768	282 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms