RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 CACNA1HO95180 2353 aa3.82□□□□□ -1.8
PTPN4-203ENST00000430976 IGLV3-32A0A0A0MS00 114 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 TRBV6-8A0A0A6YYG3 113 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 PMS2P5A8MQ11 134 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 SPTA1P02549 2419 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 IGLV3-19P01714 112 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 DEFB112Q30KQ8 113 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 DEFB121Q5J5C9 76 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 CSAG1Q6PB30 78 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 LRP4O75096 1905 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 MGAQ8IWI9 3026 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 LINC00574Q9H8X3 128 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 CDC42SE1Q9NRR8 79 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 C2CD3Q4AC94 2353 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 PLA2G2AP14555 144 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 LYZP61626 148 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 LINC00114Q6XXX2 140 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 C18orf65Q6ZTR6 163 aa3.81□□□□□ -1.8
PTPN4-203ENST00000430976 IGLV3-16A0A075B6K0 115 aa3.8□□□□□ -1.8
PTPN4-203ENST00000430976 IGHV3-30-3P0DP02 117 aa3.8□□□□□ -1.8
PTPN4-203ENST00000430976 MOBPQ13875 183 aa3.8□□□□□ -1.8
PTPN4-203ENST00000430976 CYP4F30PQ9H0H9 118 aa3.8□□□□□ -1.8
PTPN4-203ENST00000430976 PAPPA2Q9BXP8 1791 aa3.8□□□□□ -1.8
PTPN4-203ENST00000430976 LAMA2P24043 3122 aaKnown RBP3.8□□□□□ -1.8
PTPN4-203ENST00000430976 IGHV3OR16-12A0A075B7B8 117 aa3.8□□□□□ -1.8
PTPN4-203ENST00000430976 Q5VV11 94 aa3.8□□□□□ -1.8
PTPN4-203ENST00000430976 GFRA4Q9GZZ7 299 aa3.8□□□□□ -1.8
PTPN4-203ENST00000430976 DPM3Q9P2X0 92 aa3.8□□□□□ -1.8
PTPN4-203ENST00000430976 ROS1P08922 2347 aa3.8□□□□□ -1.8
PTPN4-203ENST00000430976 SETXQ7Z333 2677 aaKnown RBP3.8□□□□□ -1.8
PTPN4-203ENST00000430976 BPY2O14599 106 aa3.8□□□□□ -1.8
PTPN4-203ENST00000430976 SIP14410 1827 aa3.8□□□□□ -1.8
PTPN4-203ENST00000430976 IGHV3-73A0A0B4J1V6 119 aa3.79□□□□□ -1.8
PTPN4-203ENST00000430976 REV3LO60673 3130 aa3.79□□□□□ -1.8
PTPN4-203ENST00000430976 WDR87Q6ZQQ6 2873 aa3.79□□□□□ -1.8
PTPN4-203ENST00000430976 JMJD1CQ15652 2540 aa3.79□□□□□ -1.8
PTPN4-203ENST00000430976 GPR179Q6PRD1 2367 aa3.79□□□□□ -1.8
PTPN4-203ENST00000430976 CDH23Q9H251 3354 aa3.79□□□□□ -1.8
PTPN4-203ENST00000430976 RIF1Q5UIP0 2472 aaKnown RBP3.79□□□□□ -1.8
PTPN4-203ENST00000430976 TRBV10-1A0A0K0K1A3 114 aa3.79□□□□□ -1.8
PTPN4-203ENST00000430976 CGB3P0DN86 165 aa3.79□□□□□ -1.8
PTPN4-203ENST00000430976 CGB7P0DN87 165 aa3.79□□□□□ -1.8
PTPN4-203ENST00000430976 BRWD1-AS2P59051 145 aa3.79□□□□□ -1.8
PTPN4-203ENST00000430976 NAV2Q8IVL1 2488 aa3.79□□□□□ -1.8
PTPN4-203ENST00000430976 LRRC37AA6NMS7 1700 aa3.79□□□□□ -1.8
PTPN4-203ENST00000430976 RANBP2P49792 3224 aaKnown RBP3.79□□□□□ -1.8
PTPN4-203ENST00000430976 COL4A5P29400 1685 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 C22orf34Q6ZV56 151 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 Q8N7P7 452 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 VCANP13611 3396 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 FLNBO75369 2602 aaKnown RBP3.78□□□□□ -1.8
PTPN4-203ENST00000430976 IGLV3-9A0A075B6K5 115 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 IGHV3-15A0A0B4J1V0 119 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 A6NDX4 124 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 C11orf86A6NJI1 115 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 KRTAP27-1Q3LI81 207 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 SUMO4Q6EEV6 95 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 Q86TA4 180 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 Q8N9W7 124 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 TRBV6-6A0A0A6YYG2 114 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 DNAJC9-AS1A6NH13 148 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 SPINT4Q6UDR6 99 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 C2orf66Q6UXQ4 117 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 FGF22Q9HCT0 170 aa3.78□□□□□ -1.8
PTPN4-203ENST00000430976 NDUFA4L2Q9NRX3 87 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 KIAA1549LQ6ZVL6 1849 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 C10orf142B7Z368 130 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 LECT2O14960 151 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 PSCAO43653 123 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 C8orf17Q9NRJ1 99 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 IGHV3OR16-10A0A075B7F0 116 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 CCL3P10147 92 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 FAM27BQ5VT28 67 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 Q8TAT8 98 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 ZNF702PQ9H963 129 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 TECTAO75443 2155 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 COL4A1P02462 1669 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 LINC00271P0C7V0 271 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 RPL36AP83881 106 aaKnown RBP3.77□□□□□ -1.81
PTPN4-203ENST00000430976 ARTNQ5T4W7 220 aa3.77□□□□□ -1.81
PTPN4-203ENST00000430976 RPL36ALQ969Q0 106 aaKnown RBP3.77□□□□□ -1.81
PTPN4-203ENST00000430976 TNRC6BQ9UPQ9 1833 aaKnown RBP3.76□□□□□ -1.81
PTPN4-203ENST00000430976 TTC28Q96AY4 2481 aa3.76□□□□□ -1.81
PTPN4-203ENST00000430976 PCNX1Q96RV3 2341 aa3.76□□□□□ -1.81
PTPN4-203ENST00000430976 A8MWP4 228 aa3.76□□□□□ -1.81
PTPN4-203ENST00000430976 H0YGG7 62 aa3.76□□□□□ -1.81
PTPN4-203ENST00000430976 TSHBP01222 138 aa3.76□□□□□ -1.81
PTPN4-203ENST00000430976 SLPIP03973 132 aa3.76□□□□□ -1.81
PTPN4-203ENST00000430976 ERHP84090 104 aaKnown RBP3.76□□□□□ -1.81
PTPN4-203ENST00000430976 C11orf71Q6IPW1 123 aa3.76□□□□□ -1.81
PTPN4-203ENST00000430976 LAMA3Q16787 3333 aa3.76□□□□□ -1.81
PTPN4-203ENST00000430976 IGHV3-16A0A0C4DH30 117 aa3.76□□□□□ -1.81
PTPN4-203ENST00000430976 USP9XQ93008 2570 aaPredicted RBP3.76□□□□□ -1.81
PTPN4-203ENST00000430976 LOC101927531A0A1B0GV80 90 aa3.76□□□□□ -1.81
PTPN4-203ENST00000430976 IGKV3-11P04433 115 aa3.76□□□□□ -1.81
PTPN4-203ENST00000430976 RPL39P5Q59GN2 51 aa3.76□□□□□ -1.81
PTPN4-203ENST00000430976 WFDC10AQ9H1F0 79 aa3.76□□□□□ -1.81
PTPN4-203ENST00000430976 IGKV1OR2-108A0A075B7D4 117 aa3.75□□□□□ -1.81
PTPN4-203ENST00000430976 IGHV3-49A0A0A0MS15 119 aa3.75□□□□□ -1.81
PTPN4-203ENST00000430976 DAZAP2Q15038 168 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms