RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 CASC2Q6XLA1 102 aa5.72□□□□□ -1.49
SYNPO2-202ENST00000429713 LINC00308Q8TCZ7 52 aa5.72□□□□□ -1.49
SYNPO2-202ENST00000429713 Q6ZQT7 251 aa5.72□□□□□ -1.49
SYNPO2-202ENST00000429713 CYP4F30PQ9H0H9 118 aa5.71□□□□□ -1.49
SYNPO2-202ENST00000429713 FRYLO94915 3013 aa5.71□□□□□ -1.49
SYNPO2-202ENST00000429713 PATE2Q6UY27 113 aa5.71□□□□□ -1.5
SYNPO2-202ENST00000429713 PRR15Q8IV56 129 aa5.71□□□□□ -1.5
SYNPO2-202ENST00000429713 CCKP06307 115 aa5.71□□□□□ -1.5
SYNPO2-202ENST00000429713 LOXP28300 417 aaPredicted RBP5.71□□□□□ -1.5
SYNPO2-202ENST00000429713 EBI3Q14213 229 aa5.71□□□□□ -1.5
SYNPO2-202ENST00000429713 ZFHX2Q9C0A1 2572 aaPredicted RBP5.71□□□□□ -1.5
SYNPO2-202ENST00000429713 I3L2K1 104 aa5.71□□□□□ -1.5
SYNPO2-202ENST00000429713 E7EUB6 86 aa5.71□□□□□ -1.5
SYNPO2-202ENST00000429713 C1orf159Q96HA4 380 aa5.71□□□□□ -1.5
SYNPO2-202ENST00000429713 C14orf132Q9NPU4 83 aa5.71□□□□□ -1.5
SYNPO2-202ENST00000429713 CFHR3Q02985 330 aa5.71□□□□□ -1.5
SYNPO2-202ENST00000429713 COX7B2Q8TF08 81 aa5.71□□□□□ -1.5
SYNPO2-202ENST00000429713 WISP2O76076 250 aa5.7□□□□□ -1.5
SYNPO2-202ENST00000429713 HIGD2BQ4VC39 106 aa5.7□□□□□ -1.5
SYNPO2-202ENST00000429713 H3BPC8 53 aa5.7□□□□□ -1.5
SYNPO2-202ENST00000429713 RHPN1-AS1Q9BWJ2 59 aa5.7□□□□□ -1.5
SYNPO2-202ENST00000429713 PLA2G5P39877 138 aa5.7□□□□□ -1.5
SYNPO2-202ENST00000429713 Q8N7P7 452 aa5.7□□□□□ -1.5
SYNPO2-202ENST00000429713 CLEC2BQ92478 149 aa5.69□□□□□ -1.5
SYNPO2-202ENST00000429713 K7EIM0 57 aa5.69□□□□□ -1.5
SYNPO2-202ENST00000429713 XCL1P47992 114 aa5.69□□□□□ -1.5
SYNPO2-202ENST00000429713 UBE2E1P51965 193 aa5.69□□□□□ -1.5
SYNPO2-202ENST00000429713 XCL2Q9UBD3 114 aa5.69□□□□□ -1.5
SYNPO2-202ENST00000429713 TRAV23DV6A0A075B6W5 121 aa5.69□□□□□ -1.5
SYNPO2-202ENST00000429713 FREM2Q5SZK8 3169 aa5.69□□□□□ -1.5
SYNPO2-202ENST00000429713 KLK5Q9Y337 293 aaPredicted RBP5.69□□□□□ -1.5
SYNPO2-202ENST00000429713 TMEM89A2RUT3 159 aa5.69□□□□□ -1.5
SYNPO2-202ENST00000429713 H3BUX3 64 aa5.69□□□□□ -1.5
SYNPO2-202ENST00000429713 LECT2O14960 151 aa5.69□□□□□ -1.5
SYNPO2-202ENST00000429713 WFDC9Q8NEX5 89 aa5.69□□□□□ -1.5
SYNPO2-202ENST00000429713 IGLV11-55A0A075B6I3 123 aa5.69□□□□□ -1.5
SYNPO2-202ENST00000429713 KLHL30-AS1Q8NEE0 82 aa5.69□□□□□ -1.5
SYNPO2-202ENST00000429713 IGFL3Q6UXB1 125 aa5.68□□□□□ -1.5
SYNPO2-202ENST00000429713 TMEM254Q8TBM7 123 aa5.68□□□□□ -1.5
SYNPO2-202ENST00000429713 BRD3OSQ6XYD6 125 aa5.68□□□□□ -1.5
SYNPO2-202ENST00000429713 TRGV4A0A0C4DH28 118 aa5.68□□□□□ -1.5
SYNPO2-202ENST00000429713 POM121L12Q8N7R1 296 aa5.68□□□□□ -1.5
SYNPO2-202ENST00000429713 RNF185Q96GF1 192 aa5.68□□□□□ -1.5
SYNPO2-202ENST00000429713 IGKV1D-37A0A075B6S9 117 aa5.68□□□□□ -1.5
SYNPO2-202ENST00000429713 SPINK13Q1W4C9 94 aa5.68□□□□□ -1.5
SYNPO2-202ENST00000429713 A6NED7 52 aa5.68□□□□□ -1.5
SYNPO2-202ENST00000429713 G3V318 75 aa5.68□□□□□ -1.5
SYNPO2-202ENST00000429713 BPY2O14599 106 aa5.68□□□□□ -1.5
SYNPO2-202ENST00000429713 PRSS33Q8NF86 280 aa5.68□□□□□ -1.5
SYNPO2-202ENST00000429713 RPL39LQ96EH5 51 aaKnown RBP5.68□□□□□ -1.5
SYNPO2-202ENST00000429713 RETNQ9HD89 108 aa5.68□□□□□ -1.5
SYNPO2-202ENST00000429713 BPESC1Q9GZL8 116 aa5.67□□□□□ -1.5
SYNPO2-202ENST00000429713 TRGV1A0A0A0MS02 117 aa5.67□□□□□ -1.5
SYNPO2-202ENST00000429713 K7EMT4 169 aa5.67□□□□□ -1.5
SYNPO2-202ENST00000429713 URB1-AS1Q96HZ7 61 aa5.67□□□□□ -1.5
SYNPO2-202ENST00000429713 PRYO14603 147 aa5.67□□□□□ -1.5
SYNPO2-202ENST00000429713 GATA1P15976 413 aaPredicted RBP5.67□□□□□ -1.5
SYNPO2-202ENST00000429713 CCDC140Q96MF4 163 aa5.67□□□□□ -1.5
SYNPO2-202ENST00000429713 MAPKAPK5-AS1Q8N8E1 139 aa5.67□□□□□ -1.5
SYNPO2-202ENST00000429713 DCANP1Q8TF63 244 aa5.67□□□□□ -1.5
SYNPO2-202ENST00000429713 PSMG3-AS1Q96PY0 264 aa5.67□□□□□ -1.5
SYNPO2-202ENST00000429713 CGB3P0DN86 165 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 CGB7P0DN87 165 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 ATP11AUNQ6ZP68 121 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 A0A0J9YXV3 536 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 IGLV2-23P01705 113 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 GATA3P23771 443 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 DSPP15924 2871 aaKnown RBP5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 CDK2AP2O75956 126 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 WFDC11Q8NEX6 87 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 A0A096LNJ9 63 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 BRWD1-AS2P59051 145 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 GCN1Q92616 2671 aaKnown RBP5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 RMI2Q96E14 147 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 CTSZQ9UBR2 303 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 KLK9Q9UKQ9 250 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 FAM215AQ9Y5M1 114 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 POLR2KP53803 58 aaKnown RBP5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 SUMO4Q6EEV6 95 aa5.66□□□□□ -1.5
SYNPO2-202ENST00000429713 LINC00322Q6ZN03 302 aaPredicted RBP5.65□□□□□ -1.5
SYNPO2-202ENST00000429713 PIP4P2Q8N4L2 257 aa5.65□□□□□ -1.5
SYNPO2-202ENST00000429713 OVOL3O00110 214 aa5.65□□□□□ -1.5
SYNPO2-202ENST00000429713 ENHOQ6UWT2 76 aa5.65□□□□□ -1.5
SYNPO2-202ENST00000429713 IGIPA6NJ69 53 aa5.65□□□□□ -1.5
SYNPO2-202ENST00000429713 GNRH2O43555 120 aa5.65□□□□□ -1.5
SYNPO2-202ENST00000429713 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.65□□□□□ -1.5
SYNPO2-202ENST00000429713 UBE2D4Q9Y2X8 147 aa5.65□□□□□ -1.5
SYNPO2-202ENST00000429713 COL6A3P12111 3177 aa5.65□□□□□ -1.51
SYNPO2-202ENST00000429713 WDFY4Q6ZS81 3184 aa5.65□□□□□ -1.51
SYNPO2-202ENST00000429713 IGHV7-4-1A0A0J9YVY3 117 aa5.65□□□□□ -1.51
SYNPO2-202ENST00000429713 hDV103S1A0JD37 113 aa5.65□□□□□ -1.51
SYNPO2-202ENST00000429713 GNLYP22749 145 aa5.65□□□□□ -1.51
SYNPO2-202ENST00000429713 DKK4Q9UBT3 224 aa5.65□□□□□ -1.51
SYNPO2-202ENST00000429713 RUSC1-AS1Q66K80 236 aa5.65□□□□□ -1.51
SYNPO2-202ENST00000429713 CELA1Q9UNI1 258 aa5.65□□□□□ -1.51
SYNPO2-202ENST00000429713 TNFRSF13BO14836 293 aaPredicted RBP5.64□□□□□ -1.51
SYNPO2-202ENST00000429713 TTTY13Q9BZ97 58 aa5.64□□□□□ -1.51
SYNPO2-202ENST00000429713 MSRB1Q9NZV6 116 aa5.64□□□□□ -1.51
SYNPO2-202ENST00000429713 LINC01561Q8N1V8 128 aa5.64□□□□□ -1.51
SYNPO2-202ENST00000429713 ZNF625Q96I27 306 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms