RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 LINC01587Q99440 93 aa9.66□□□□□ -0.86
SNRNP200-202ENST00000429650 UBE2D4Q9Y2X8 147 aa9.66□□□□□ -0.86
SNRNP200-202ENST00000429650 LINC00467Q9BRT7 94 aa9.66□□□□□ -0.86
SNRNP200-202ENST00000429650 SPANXA1Q9NS26 97 aa9.66□□□□□ -0.86
SNRNP200-202ENST00000429650 IGHV1-58A0A0C4DH39 117 aa9.65□□□□□ -0.86
SNRNP200-202ENST00000429650 DEFB114Q30KQ6 69 aa9.65□□□□□ -0.86
SNRNP200-202ENST00000429650 TEN1Q86WV5 123 aa9.65□□□□□ -0.86
SNRNP200-202ENST00000429650 LITAFQ99732 161 aa9.65□□□□□ -0.86
SNRNP200-202ENST00000429650 ITPR3Q14573 2671 aa9.65□□□□□ -0.86
SNRNP200-202ENST00000429650 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.65□□□□□ -0.87
SNRNP200-202ENST00000429650 IGKV2-29A2NJV5 120 aaPredicted RBP9.65□□□□□ -0.87
SNRNP200-202ENST00000429650 IGHV3-53P01767 116 aa9.65□□□□□ -0.87
SNRNP200-202ENST00000429650 CARD19Q96LW7 228 aa9.65□□□□□ -0.87
SNRNP200-202ENST00000429650 C2CD3Q4AC94 2353 aa9.65□□□□□ -0.87
SNRNP200-202ENST00000429650 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.64□□□□□ -0.87
SNRNP200-202ENST00000429650 TINCRA0A1B0GVN0 87 aa9.64□□□□□ -0.87
SNRNP200-202ENST00000429650 BEAN1Q3B7T3 259 aa9.64□□□□□ -0.87
SNRNP200-202ENST00000429650 FLNAP21333 2647 aaKnown RBP9.64□□□□□ -0.87
SNRNP200-202ENST00000429650 INSP01308 110 aa9.64□□□□□ -0.87
SNRNP200-202ENST00000429650 Q6ZUT4 128 aa9.64□□□□□ -0.87
SNRNP200-202ENST00000429650 PPDPFLQ8WWR9 84 aa9.64□□□□□ -0.87
SNRNP200-202ENST00000429650 IGHV3-38A0A0C4DH36 116 aa9.63□□□□□ -0.87
SNRNP200-202ENST00000429650 H7C2G1 150 aa9.63□□□□□ -0.87
SNRNP200-202ENST00000429650 DEFB113Q30KQ7 82 aa9.63□□□□□ -0.87
SNRNP200-202ENST00000429650 DNAJC30Q96LL9 226 aa9.63□□□□□ -0.87
SNRNP200-202ENST00000429650 V9GYY9 64 aa9.63□□□□□ -0.87
SNRNP200-202ENST00000429650 VSIG2Q96IQ7 327 aa9.63□□□□□ -0.87
SNRNP200-202ENST00000429650 CDIP1Q9H305 208 aa9.63□□□□□ -0.87
SNRNP200-202ENST00000429650 NDUFA12Q9UI09 145 aa9.63□□□□□ -0.87
SNRNP200-202ENST00000429650 A8MZ25 164 aa9.62□□□□□ -0.87
SNRNP200-202ENST00000429650 TENM4Q6N022 2769 aa9.62□□□□□ -0.87
SNRNP200-202ENST00000429650 SPINK8P0C7L1 97 aa9.62□□□□□ -0.87
SNRNP200-202ENST00000429650 FHL3Q13643 280 aa9.62□□□□□ -0.87
SNRNP200-202ENST00000429650 Q96MF0 132 aa9.62□□□□□ -0.87
SNRNP200-202ENST00000429650 ADAMTSL4-AS1Q5T5F5 129 aa9.61□□□□□ -0.87
SNRNP200-202ENST00000429650 ANKRD29Q8N6D5 301 aa9.61□□□□□ -0.87
SNRNP200-202ENST00000429650 GAGE12JA6NER3 117 aa9.61□□□□□ -0.87
SNRNP200-202ENST00000429650 GAGE7O76087 117 aa9.61□□□□□ -0.87
SNRNP200-202ENST00000429650 GAGE12FP0CL80 117 aa9.61□□□□□ -0.87
SNRNP200-202ENST00000429650 GAGE12GP0CL81 117 aa9.61□□□□□ -0.87
SNRNP200-202ENST00000429650 GAGE12IP0CL82 117 aa9.61□□□□□ -0.87
SNRNP200-202ENST00000429650 GAGE4Q13068 117 aa9.61□□□□□ -0.87
SNRNP200-202ENST00000429650 SPANXDQ9BXN6 97 aa9.61□□□□□ -0.87
SNRNP200-202ENST00000429650 SPANXCQ9NY87 97 aa9.61□□□□□ -0.87
SNRNP200-202ENST00000429650 XCL2Q9UBD3 114 aa9.61□□□□□ -0.87
SNRNP200-202ENST00000429650 SLC25A20O43772 301 aa9.6□□□□□ -0.87
SNRNP200-202ENST00000429650 Q1RN00 199 aa9.6□□□□□ -0.87
SNRNP200-202ENST00000429650 ODF3L2Q3SX64 289 aa9.6□□□□□ -0.87
SNRNP200-202ENST00000429650 C11orf44Q8N8P7 122 aa9.6□□□□□ -0.87
SNRNP200-202ENST00000429650 C9JAW5 83 aa9.6□□□□□ -0.87
SNRNP200-202ENST00000429650 PRSS2P07478 247 aa9.6□□□□□ -0.87
SNRNP200-202ENST00000429650 ITPR2Q14571 2701 aa9.59□□□□□ -0.87
SNRNP200-202ENST00000429650 MIAQ16674 131 aa9.59□□□□□ -0.87
SNRNP200-202ENST00000429650 HIST2H2BCQ6DN03 193 aa9.59□□□□□ -0.87
SNRNP200-202ENST00000429650 ZFAND6Q6FIF0 208 aa9.59□□□□□ -0.87
SNRNP200-202ENST00000429650 Q6ZSV7 163 aa9.59□□□□□ -0.87
SNRNP200-202ENST00000429650 TRBV30A0A0K0K1B3 111 aa9.58□□□□□ -0.88
SNRNP200-202ENST00000429650 C6orf226Q5I0X4 101 aa9.58□□□□□ -0.88
SNRNP200-202ENST00000429650 KRTAP1-3Q8IUG1 177 aa9.58□□□□□ -0.88
SNRNP200-202ENST00000429650 C1orf158Q8N1D5 194 aa9.58□□□□□ -0.88
SNRNP200-202ENST00000429650 CDKN2A-AS1Q9UH64 79 aa9.58□□□□□ -0.88
SNRNP200-202ENST00000429650 TRIAP1O43715 76 aa9.57□□□□□ -0.88
SNRNP200-202ENST00000429650 ATXN8Q156A1 80 aa9.57□□□□□ -0.88
SNRNP200-202ENST00000429650 STHQ8IWL8 128 aa9.57□□□□□ -0.88
SNRNP200-202ENST00000429650 OR13C6PQ8NH95 151 aa9.57□□□□□ -0.88
SNRNP200-202ENST00000429650 IL17DQ8TAD2 202 aa9.57□□□□□ -0.88
SNRNP200-202ENST00000429650 IGHV3OR16-12A0A075B7B8 117 aa9.57□□□□□ -0.88
SNRNP200-202ENST00000429650 IGLV5-45A0A087WSX0 123 aa9.57□□□□□ -0.88
SNRNP200-202ENST00000429650 C4orf48Q5BLP8 95 aa9.57□□□□□ -0.88
SNRNP200-202ENST00000429650 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.57□□□□□ -0.88
SNRNP200-202ENST00000429650 TMEM86BQ8N661 226 aa9.56□□□□□ -0.88
SNRNP200-202ENST00000429650 TMEM126AQ9H061 195 aa9.56□□□□□ -0.88
SNRNP200-202ENST00000429650 NPC2P61916 151 aa9.56□□□□□ -0.88
SNRNP200-202ENST00000429650 LINC01620Q4KN68 170 aa9.56□□□□□ -0.88
SNRNP200-202ENST00000429650 ZNF843Q8N446 348 aa9.56□□□□□ -0.88
SNRNP200-202ENST00000429650 SETXQ7Z333 2677 aaKnown RBP9.55□□□□□ -0.88
SNRNP200-202ENST00000429650 TRGV1A0A0A0MS02 117 aa9.55□□□□□ -0.88
SNRNP200-202ENST00000429650 DGAT2L7PQ6IED9 249 aa9.55□□□□□ -0.88
SNRNP200-202ENST00000429650 FAM19A5Q7Z5A7 132 aaPredicted RBP9.55□□□□□ -0.88
SNRNP200-202ENST00000429650 TIMM17BO60830 172 aa9.55□□□□□ -0.88
SNRNP200-202ENST00000429650 MT-ATP8P03928 68 aa9.55□□□□□ -0.88
SNRNP200-202ENST00000429650 XGP55808 180 aa9.55□□□□□ -0.88
SNRNP200-202ENST00000429650 COX6A2Q02221 97 aa9.55□□□□□ -0.88
SNRNP200-202ENST00000429650 TMEM101Q96IK0 257 aa9.55□□□□□ -0.88
SNRNP200-202ENST00000429650 ICOSQ9Y6W8 199 aa9.54□□□□□ -0.88
SNRNP200-202ENST00000429650 NDUFA1O15239 70 aa9.54□□□□□ -0.88
SNRNP200-202ENST00000429650 DNAJC9-AS1A6NH13 148 aa9.53□□□□□ -0.88
SNRNP200-202ENST00000429650 LINC00694P0DN24 101 aa9.53□□□□□ -0.88
SNRNP200-202ENST00000429650 NOTCH2Q04721 2471 aa9.53□□□□□ -0.88
SNRNP200-202ENST00000429650 CCL24O00175 119 aa9.53□□□□□ -0.88
SNRNP200-202ENST00000429650 LINC01600Q96MT4 127 aa9.53□□□□□ -0.88
SNRNP200-202ENST00000429650 IFITM1P13164 125 aa9.52□□□□□ -0.88
SNRNP200-202ENST00000429650 HERVK_113P63121 156 aa9.52□□□□□ -0.88
SNRNP200-202ENST00000429650 LINC00242Q5T6M2 205 aa9.52□□□□□ -0.88
SNRNP200-202ENST00000429650 Q6ZTI0 123 aa9.52□□□□□ -0.88
SNRNP200-202ENST00000429650 DAND5Q8N907 189 aa9.52□□□□□ -0.88
SNRNP200-202ENST00000429650 IGLV5-39A0A0G2JS06 123 aa9.52□□□□□ -0.89
SNRNP200-202ENST00000429650 TRBV10-2A0A0K0K1G8 114 aa9.52□□□□□ -0.89
SNRNP200-202ENST00000429650 K7EQD1 137 aa9.52□□□□□ -0.89
SNRNP200-202ENST00000429650 RPL36AP83881 106 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms