RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 TEX43Q6ZNM6 134 aa8.77□□□□□ -1.01
HMGB3P4-201ENST00000428776 OR5A1Q8NGJ0 315 aa8.77□□□□□ -1.01
HMGB3P4-201ENST00000428776 AMELXQ99217 191 aa8.77□□□□□ -1.01
HMGB3P4-201ENST00000428776 DNAH9Q9NYC9 4486 aa8.76□□□□□ -1.01
HMGB3P4-201ENST00000428776 A0A1B0GUV1 79 aa8.76□□□□□ -1.01
HMGB3P4-201ENST00000428776 F8VRH5 84 aa8.76□□□□□ -1.01
HMGB3P4-201ENST00000428776 ZNF664Q8N3J9 261 aa8.76□□□□□ -1.01
HMGB3P4-201ENST00000428776 CHTOPQ9Y3Y2 248 aaKnown RBP8.76□□□□□ -1.01
HMGB3P4-201ENST00000428776 TRAV8-6A0A0B4J262 113 aa8.75□□□□□ -1.01
HMGB3P4-201ENST00000428776 DPM2O94777 84 aa8.75□□□□□ -1.01
HMGB3P4-201ENST00000428776 PLNP26678 52 aa8.75□□□□□ -1.01
HMGB3P4-201ENST00000428776 S100A12P80511 92 aa8.75□□□□□ -1.01
HMGB3P4-201ENST00000428776 CDPF1Q6NVV7 123 aa8.75□□□□□ -1.01
HMGB3P4-201ENST00000428776 Q6ZUT4 128 aa8.75□□□□□ -1.01
HMGB3P4-201ENST00000428776 PMCHL2Q9BQD1 86 aa8.75□□□□□ -1.01
HMGB3P4-201ENST00000428776 CDC42SE2Q9NRR3 84 aa8.75□□□□□ -1.01
HMGB3P4-201ENST00000428776 MRPL35Q9NZE8 188 aaKnown RBP8.75□□□□□ -1.01
HMGB3P4-201ENST00000428776 IGLL5B9A064 214 aa8.74□□□□□ -1.01
HMGB3P4-201ENST00000428776 TMEM262E9PQX1 116 aa8.74□□□□□ -1.01
HMGB3P4-201ENST00000428776 IGKCP01834 107 aa8.74□□□□□ -1.01
HMGB3P4-201ENST00000428776 ESRGQ1W209 222 aa8.74□□□□□ -1.01
HMGB3P4-201ENST00000428776 ZC2HC1BQ5TFG8 222 aa8.74□□□□□ -1.01
HMGB3P4-201ENST00000428776 ATOH7Q8N100 152 aa8.74□□□□□ -1.01
HMGB3P4-201ENST00000428776 C2orf88Q9BSF0 95 aa8.74□□□□□ -1.01
HMGB3P4-201ENST00000428776 FBN3Q75N90 2809 aa8.74□□□□□ -1.01
HMGB3P4-201ENST00000428776 TRAV9-2A0A087WT02 112 aa8.73□□□□□ -1.01
HMGB3P4-201ENST00000428776 VAMP8Q9BV40 100 aa8.73□□□□□ -1.01
HMGB3P4-201ENST00000428776 NUPR2A6NF83 97 aa8.72□□□□□ -1.01
HMGB3P4-201ENST00000428776 RBX1P62877 108 aa8.72□□□□□ -1.01
HMGB3P4-201ENST00000428776 MPV17L2Q567V2 206 aa8.72□□□□□ -1.01
HMGB3P4-201ENST00000428776 RNASE13Q5GAN3 156 aaKnown RBP8.72□□□□□ -1.01
HMGB3P4-201ENST00000428776 IGLV4-69A0A075B6H9 119 aa8.71□□□□□ -1.02
HMGB3P4-201ENST00000428776 IGLV4-60A0A075B6I1 120 aa8.71□□□□□ -1.02
HMGB3P4-201ENST00000428776 HSBP1L1C9JCN9 74 aa8.71□□□□□ -1.02
HMGB3P4-201ENST00000428776 IGLC3P0DOY3 106 aa8.71□□□□□ -1.02
HMGB3P4-201ENST00000428776 NFE4Q86UQ8 179 aa8.71□□□□□ -1.02
HMGB3P4-201ENST00000428776 A0A0J9YXV3 536 aa8.7□□□□□ -1.02
HMGB3P4-201ENST00000428776 UBE2D1P51668 147 aa8.7□□□□□ -1.02
HMGB3P4-201ENST00000428776 CCL18P55774 89 aa8.7□□□□□ -1.02
HMGB3P4-201ENST00000428776 FAM19A3Q7Z5A8 133 aa8.7□□□□□ -1.02
HMGB3P4-201ENST00000428776 KLK5Q9Y337 293 aaPredicted RBP8.7□□□□□ -1.02
HMGB3P4-201ENST00000428776 TGP01266 2768 aa8.69□□□□□ -1.02
HMGB3P4-201ENST00000428776 TINCRA0A1B0GVN0 87 aa8.69□□□□□ -1.02
HMGB3P4-201ENST00000428776 hDV102S1A0JD36 115 aa8.69□□□□□ -1.02
HMGB3P4-201ENST00000428776 TCTAP57738 103 aa8.69□□□□□ -1.02
HMGB3P4-201ENST00000428776 SEC11AP67812 179 aa8.69□□□□□ -1.02
HMGB3P4-201ENST00000428776 MAJINQ3KP22 176 aa8.69□□□□□ -1.02
HMGB3P4-201ENST00000428776 CHAC1Q9BUX1 264 aa8.69□□□□□ -1.02
HMGB3P4-201ENST00000428776 PAM16Q9Y3D7 125 aa8.69□□□□□ -1.02
HMGB3P4-201ENST00000428776 C11orf86A6NJI1 115 aa8.68□□□□□ -1.02
HMGB3P4-201ENST00000428776 ANGP03950 147 aaKnown RBP8.68□□□□□ -1.02
HMGB3P4-201ENST00000428776 SPATA45Q537H7 98 aa8.68□□□□□ -1.02
HMGB3P4-201ENST00000428776 WFDC10BQ8IUB3 73 aa8.68□□□□□ -1.02
HMGB3P4-201ENST00000428776 APLNQ9ULZ1 77 aa8.68□□□□□ -1.02
HMGB3P4-201ENST00000428776 MRPS16Q9Y3D3 137 aaKnown RBP8.68□□□□□ -1.02
HMGB3P4-201ENST00000428776 PRKDCP78527 4128 aaKnown RBP8.68□□□□□ -1.02
HMGB3P4-201ENST00000428776 TRAV13-1A0A0B4J241 112 aa8.67□□□□□ -1.02
HMGB3P4-201ENST00000428776 CCL25O15444 150 aa8.67□□□□□ -1.02
HMGB3P4-201ENST00000428776 LINC00242Q5T6M2 205 aa8.67□□□□□ -1.02
HMGB3P4-201ENST00000428776 STPG4Q8N801 248 aa8.67□□□□□ -1.02
HMGB3P4-201ENST00000428776 GEMIN7Q9H840 131 aaKnown RBP8.67□□□□□ -1.02
HMGB3P4-201ENST00000428776 LINC00588Q9Y4M8 146 aa8.67□□□□□ -1.02
HMGB3P4-201ENST00000428776 HERVK_113P63121 156 aa8.66□□□□□ -1.02
HMGB3P4-201ENST00000428776 TMEM170BQ5T4T1 132 aa8.66□□□□□ -1.02
HMGB3P4-201ENST00000428776 LINC00269Q8N2A0 174 aa8.66□□□□□ -1.02
HMGB3P4-201ENST00000428776 Q8N3U1 123 aa8.66□□□□□ -1.02
HMGB3P4-201ENST00000428776 TENM2Q9NT68 2774 aa8.66□□□□□ -1.02
HMGB3P4-201ENST00000428776 IGKV3OR2-268A0A0C4DH90 116 aa8.65□□□□□ -1.02
HMGB3P4-201ENST00000428776 LINC00959A0A1B0GUT2 108 aa8.65□□□□□ -1.02
HMGB3P4-201ENST00000428776 IGHV3-30P01768 117 aa8.65□□□□□ -1.02
HMGB3P4-201ENST00000428776 IGHV3-33P01772 117 aa8.65□□□□□ -1.02
HMGB3P4-201ENST00000428776 IGHV3-30-3P0DP02 117 aa8.65□□□□□ -1.02
HMGB3P4-201ENST00000428776 IGHV3-30-5P0DP03 117 aa8.65□□□□□ -1.02
HMGB3P4-201ENST00000428776 ZNF22P17026 224 aaPredicted RBP8.65□□□□□ -1.02
HMGB3P4-201ENST00000428776 REG3AQ06141 175 aa8.65□□□□□ -1.02
HMGB3P4-201ENST00000428776 SS18Q15532 418 aa8.65□□□□□ -1.02
HMGB3P4-201ENST00000428776 LINC01556Q5JQF7 62 aa8.65□□□□□ -1.02
HMGB3P4-201ENST00000428776 UPK3BQ9BT76 320 aa8.65□□□□□ -1.02
HMGB3P4-201ENST00000428776 IGLV5-45A0A087WSX0 123 aa8.64□□□□□ -1.03
HMGB3P4-201ENST00000428776 SIVA1O15304 175 aa8.64□□□□□ -1.03
HMGB3P4-201ENST00000428776 DNAH10OSP0CZ25 163 aa8.64□□□□□ -1.03
HMGB3P4-201ENST00000428776 HERVK_113P61574 105 aa8.64□□□□□ -1.03
HMGB3P4-201ENST00000428776 ANKRD39Q53RE8 183 aa8.64□□□□□ -1.03
HMGB3P4-201ENST00000428776 PRR34Q9NV39 138 aa8.64□□□□□ -1.03
HMGB3P4-201ENST00000428776 KLK12Q9UKR0 248 aa8.64□□□□□ -1.03
HMGB3P4-201ENST00000428776 TMEM223A0PJW6 202 aa8.63□□□□□ -1.03
HMGB3P4-201ENST00000428776 TSTD3H0UI37 97 aa8.63□□□□□ -1.03
HMGB3P4-201ENST00000428776 H3BRM9 83 aa8.63□□□□□ -1.03
HMGB3P4-201ENST00000428776 COX6A2Q02221 97 aa8.63□□□□□ -1.03
HMGB3P4-201ENST00000428776 LINC00469Q8N7U9 141 aa8.63□□□□□ -1.03
HMGB3P4-201ENST00000428776 PRO1933Q9H354 126 aa8.63□□□□□ -1.03
HMGB3P4-201ENST00000428776 E9PLD3 99 aa8.62□□□□□ -1.03
HMGB3P4-201ENST00000428776 CLPSL2Q6UWE3 100 aa8.62□□□□□ -1.03
HMGB3P4-201ENST00000428776 MUC7Q8TAX7 377 aa8.62□□□□□ -1.03
HMGB3P4-201ENST00000428776 WWC2-AS2Q96NR7 200 aa8.62□□□□□ -1.03
HMGB3P4-201ENST00000428776 CDKN2A-AS1Q9UH64 79 aa8.62□□□□□ -1.03
HMGB3P4-201ENST00000428776 CRPP02741 224 aa8.61□□□□□ -1.03
HMGB3P4-201ENST00000428776 ENHOQ6UWT2 76 aa8.61□□□□□ -1.03
HMGB3P4-201ENST00000428776 IGKV2D-26A0A0A0MRZ7 120 aa8.6□□□□□ -1.03
HMGB3P4-201ENST00000428776 TRAV8-4A0A0B4J246 113 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms