RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 ZFAND6Q6FIF0 208 aa10.23□□□□□ -0.77
TPM3P9-201ENST00000424846 TMEM101Q96IK0 257 aa10.23□□□□□ -0.77
TPM3P9-201ENST00000424846 IGHV3OR16-12A0A075B7B8 117 aa10.22□□□□□ -0.77
TPM3P9-201ENST00000424846 TMEM262E9PQX1 116 aa10.22□□□□□ -0.77
TPM3P9-201ENST00000424846 RPL13AP40429 203 aaKnown RBP10.22□□□□□ -0.77
TPM3P9-201ENST00000424846 ZNF415Q09FC8 603 aa10.22□□□□□ -0.77
TPM3P9-201ENST00000424846 C2orf82Q6UX34 121 aa10.22□□□□□ -0.77
TPM3P9-201ENST00000424846 KHDC1LQ5JSQ8 128 aa10.22□□□□□ -0.77
TPM3P9-201ENST00000424846 ANAPC13Q9BS18 74 aa10.22□□□□□ -0.77
TPM3P9-201ENST00000424846 SPANXA1Q9NS26 97 aa10.22□□□□□ -0.77
TPM3P9-201ENST00000424846 XCL2Q9UBD3 114 aa10.22□□□□□ -0.77
TPM3P9-201ENST00000424846 CR1P17927 2039 aa10.22□□□□□ -0.77
TPM3P9-201ENST00000424846 IGHV3-53P01767 116 aa10.21□□□□□ -0.77
TPM3P9-201ENST00000424846 Q6YL49 198 aa10.21□□□□□ -0.77
TPM3P9-201ENST00000424846 TEX29Q8N6K0 151 aa10.21□□□□□ -0.77
TPM3P9-201ENST00000424846 CITED2Q99967 270 aaPredicted RBP10.21□□□□□ -0.78
TPM3P9-201ENST00000424846 UBE2WQ96B02 151 aa10.2□□□□□ -0.78
TPM3P9-201ENST00000424846 TRAV8-4A0A0B4J246 113 aa10.19□□□□□ -0.78
TPM3P9-201ENST00000424846 SOSTDC1Q6X4U4 206 aa10.19□□□□□ -0.78
TPM3P9-201ENST00000424846 Q9H8V8 135 aa10.19□□□□□ -0.78
TPM3P9-201ENST00000424846 TTC32Q5I0X7 151 aa10.18□□□□□ -0.78
TPM3P9-201ENST00000424846 LINC00242Q5T6M2 205 aa10.18□□□□□ -0.78
TPM3P9-201ENST00000424846 C15orf53Q8NAA6 179 aa10.18□□□□□ -0.78
TPM3P9-201ENST00000424846 CCDC168Q8NDH2 2452 aa10.18□□□□□ -0.78
TPM3P9-201ENST00000424846 LST1O00453 97 aa10.18□□□□□ -0.78
TPM3P9-201ENST00000424846 Q8N2B8 174 aa10.18□□□□□ -0.78
TPM3P9-201ENST00000424846 C11orf44Q8N8P7 122 aa10.18□□□□□ -0.78
TPM3P9-201ENST00000424846 SNCGO76070 127 aa10.17□□□□□ -0.78
TPM3P9-201ENST00000424846 FSHBP01225 129 aa10.17□□□□□ -0.78
TPM3P9-201ENST00000424846 KRTAP10-9P60411 292 aa10.17□□□□□ -0.78
TPM3P9-201ENST00000424846 LINC01600Q96MT4 127 aa10.17□□□□□ -0.78
TPM3P9-201ENST00000424846 GAGE2BQ13066 116 aa10.17□□□□□ -0.78
TPM3P9-201ENST00000424846 BEAN1Q3B7T3 259 aa10.17□□□□□ -0.78
TPM3P9-201ENST00000424846 GAGE2EQ4V326 116 aa10.17□□□□□ -0.78
TPM3P9-201ENST00000424846 DGAT2L7PQ6IED9 249 aa10.17□□□□□ -0.78
TPM3P9-201ENST00000424846 NTM-AS1Q6ZSK4 140 aa10.17□□□□□ -0.78
TPM3P9-201ENST00000424846 GAGE2DQ9UEU5 116 aa10.17□□□□□ -0.78
TPM3P9-201ENST00000424846 TRAV13-1A0A0B4J241 112 aa10.17□□□□□ -0.78
TPM3P9-201ENST00000424846 NDUFA1O15239 70 aa10.17□□□□□ -0.78
TPM3P9-201ENST00000424846 RS1O15537 224 aa10.17□□□□□ -0.78
TPM3P9-201ENST00000424846 IGLV5-45A0A087WSX0 123 aa10.16□□□□□ -0.78
TPM3P9-201ENST00000424846 IGHV4-31P0DP07 118 aa10.16□□□□□ -0.78
TPM3P9-201ENST00000424846 DEFB114Q30KQ6 69 aa10.16□□□□□ -0.78
TPM3P9-201ENST00000424846 LINC00308Q8TCZ7 52 aa10.16□□□□□ -0.78
TPM3P9-201ENST00000424846 ODF3L2Q3SX64 289 aa10.16□□□□□ -0.78
TPM3P9-201ENST00000424846 C1orf158Q8N1D5 194 aa10.16□□□□□ -0.78
TPM3P9-201ENST00000424846 DYNLRB2Q8TF09 96 aa10.16□□□□□ -0.78
TPM3P9-201ENST00000424846 TRGV1A0A0A0MS02 117 aa10.15□□□□□ -0.78
TPM3P9-201ENST00000424846 SS18L2Q9UHA2 77 aa10.15□□□□□ -0.78
TPM3P9-201ENST00000424846 INSP01308 110 aa10.15□□□□□ -0.78
TPM3P9-201ENST00000424846 NDUFV3P56181 108 aaKnown RBP10.15□□□□□ -0.78
TPM3P9-201ENST00000424846 APCP25054 2843 aa10.14□□□□□ -0.79
TPM3P9-201ENST00000424846 B5MCH6 92 aa10.14□□□□□ -0.79
TPM3P9-201ENST00000424846 PRB1P04280 392 aa10.14□□□□□ -0.79
TPM3P9-201ENST00000424846 COX6CP09669 75 aa10.14□□□□□ -0.79
TPM3P9-201ENST00000424846 TIRAPP58753 221 aa10.14□□□□□ -0.79
TPM3P9-201ENST00000424846 DSCR9P59020 149 aa10.14□□□□□ -0.79
TPM3P9-201ENST00000424846 Q6ZTI0 123 aa10.14□□□□□ -0.79
TPM3P9-201ENST00000424846 IGLV5-39A0A0G2JS06 123 aa10.14□□□□□ -0.79
TPM3P9-201ENST00000424846 SMIM1B2RUZ4 78 aa10.14□□□□□ -0.79
TPM3P9-201ENST00000424846 J3QLI3 93 aa10.14□□□□□ -0.79
TPM3P9-201ENST00000424846 CCDC179H3BU77 68 aa10.13□□□□□ -0.79
TPM3P9-201ENST00000424846 ITPR3Q14573 2671 aa10.13□□□□□ -0.79
TPM3P9-201ENST00000424846 H3BT86 120 aa10.13□□□□□ -0.79
TPM3P9-201ENST00000424846 PIK3CD-AS1Q5SR53 167 aa10.13□□□□□ -0.79
TPM3P9-201ENST00000424846 DNAJC30Q96LL9 226 aa10.13□□□□□ -0.79
TPM3P9-201ENST00000424846 Q96MF0 132 aa10.13□□□□□ -0.79
TPM3P9-201ENST00000424846 A0A1W2PRX2 142 aa10.13□□□□□ -0.79
TPM3P9-201ENST00000424846 TIMM17BO60830 172 aa10.13□□□□□ -0.79
TPM3P9-201ENST00000424846 YAE1D1Q9NRH1 226 aa10.13□□□□□ -0.79
TPM3P9-201ENST00000424846 PEMTQ9UBM1 199 aa10.12□□□□□ -0.79
TPM3P9-201ENST00000424846 GAGE12JA6NER3 117 aa10.11□□□□□ -0.79
TPM3P9-201ENST00000424846 IFITM1P13164 125 aa10.11□□□□□ -0.79
TPM3P9-201ENST00000424846 GAGE4Q13068 117 aa10.11□□□□□ -0.79
TPM3P9-201ENST00000424846 GAGE5Q13069 117 aa10.11□□□□□ -0.79
TPM3P9-201ENST00000424846 USP24Q9UPU5 2620 aa10.11□□□□□ -0.79
TPM3P9-201ENST00000424846 PLA2G2AP14555 144 aa10.11□□□□□ -0.79
TPM3P9-201ENST00000424846 C4orf3Q8WVX3 66 aa10.11□□□□□ -0.79
TPM3P9-201ENST00000424846 LOC100131303A0A0U1RQF7 123 aa10.1□□□□□ -0.79
TPM3P9-201ENST00000424846 UBR5O95071 2799 aaPredicted RBP10.1□□□□□ -0.79
TPM3P9-201ENST00000424846 F5H768 121 aa10.1□□□□□ -0.79
TPM3P9-201ENST00000424846 HERVK_113P63121 156 aa10.1□□□□□ -0.79
TPM3P9-201ENST00000424846 PRIMA1Q86XR5 153 aa10.1□□□□□ -0.79
TPM3P9-201ENST00000424846 GAGE6Q13070 117 aa10.09□□□□□ -0.79
TPM3P9-201ENST00000424846 IL17DQ8TAD2 202 aa10.09□□□□□ -0.79
TPM3P9-201ENST00000424846 FAM218AQ96MZ4 157 aa10.09□□□□□ -0.79
TPM3P9-201ENST00000424846 WFDC10AQ9H1F0 79 aa10.09□□□□□ -0.79
TPM3P9-201ENST00000424846 MEIG1Q5JSS6 88 aa10.09□□□□□ -0.79
TPM3P9-201ENST00000424846 FN1P02751 2386 aaKnown RBP10.09□□□□□ -0.79
TPM3P9-201ENST00000424846 CIRBPQ14011 172 aaKnown RBP10.08□□□□□ -0.8
TPM3P9-201ENST00000424846 STHQ8IWL8 128 aa10.08□□□□□ -0.8
TPM3P9-201ENST00000424846 FLNAP21333 2647 aaKnown RBP10.08□□□□□ -0.8
TPM3P9-201ENST00000424846 MTORP42345 2549 aa10.08□□□□□ -0.8
TPM3P9-201ENST00000424846 CDC42SE2Q9NRR3 84 aa10.08□□□□□ -0.8
TPM3P9-201ENST00000424846 ACANP16112 2415 aa10.07□□□□□ -0.8
TPM3P9-201ENST00000424846 K7EQD1 137 aa10.07□□□□□ -0.8
TPM3P9-201ENST00000424846 DEFB121Q5J5C9 76 aa10.07□□□□□ -0.8
TPM3P9-201ENST00000424846 NOP10Q9NPE3 64 aaKnown RBP10.07□□□□□ -0.8
TPM3P9-201ENST00000424846 SHISA2Q6UWI4 295 aa10.07□□□□□ -0.8
TPM3P9-201ENST00000424846 C22orf24Q9Y442 160 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms