RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 CSDC2Q9Y534 153 aaKnown RBP11.37□□□□□ -0.59
FOXN4-203ENST00000423960 MIAQ16674 131 aa11.36□□□□□ -0.59
FOXN4-203ENST00000423960 FA2HQ7L5A8 372 aa11.36□□□□□ -0.59
FOXN4-203ENST00000423960 C18orf32Q8TCD1 76 aa11.36□□□□□ -0.59
FOXN4-203ENST00000423960 TIMM21Q9BVV7 248 aa11.36□□□□□ -0.59
FOXN4-203ENST00000423960 COX11Q9Y6N1 276 aa11.36□□□□□ -0.59
FOXN4-203ENST00000423960 IGKV2D-24A0A075B6R9 120 aa11.35□□□□□ -0.59
FOXN4-203ENST00000423960 LINC01546A6NGU7 62 aa11.35□□□□□ -0.59
FOXN4-203ENST00000423960 PSCAO43653 123 aa11.35□□□□□ -0.59
FOXN4-203ENST00000423960 G0S2P27469 103 aa11.35□□□□□ -0.59
FOXN4-203ENST00000423960 ZNF664Q8N3J9 261 aa11.35□□□□□ -0.59
FOXN4-203ENST00000423960 CDC42SE2Q9NRR3 84 aa11.35□□□□□ -0.59
FOXN4-203ENST00000423960 A0A1B0GVY2 172 aa11.34□□□□□ -0.59
FOXN4-203ENST00000423960 TNP2Q05952 138 aa11.34□□□□□ -0.59
FOXN4-203ENST00000423960 C1orf43Q9BWL3 253 aa11.34□□□□□ -0.59
FOXN4-203ENST00000423960 SPANXA1Q9NS26 97 aa11.34□□□□□ -0.59
FOXN4-203ENST00000423960 CYSLTR1Q9Y271 337 aa11.34□□□□□ -0.59
FOXN4-203ENST00000423960 HERC2O95714 4834 aa11.33□□□□□ -0.6
FOXN4-203ENST00000423960 TRAV8-4A0A0B4J246 113 aa11.33□□□□□ -0.6
FOXN4-203ENST00000423960 IGKV3OR2-268A0A0C4DH90 116 aa11.33□□□□□ -0.6
FOXN4-203ENST00000423960 LINC00614P0C842 121 aa11.33□□□□□ -0.6
FOXN4-203ENST00000423960 RAB5BP61020 215 aa11.32□□□□□ -0.6
FOXN4-203ENST00000423960 C2orf66Q6UXQ4 117 aa11.32□□□□□ -0.6
FOXN4-203ENST00000423960 PYGO1Q9Y3Y4 419 aa11.32□□□□□ -0.6
FOXN4-203ENST00000423960 AP5S1Q9NUS5 200 aa11.31□□□□□ -0.6
FOXN4-203ENST00000423960 KIAA1109Q2LD37 5005 aa11.3□□□□□ -0.6
FOXN4-203ENST00000423960 IGLV10-54A0A075B6I4 117 aa11.3□□□□□ -0.6
FOXN4-203ENST00000423960 MRPS36P82909 103 aaKnown RBP11.3□□□□□ -0.6
FOXN4-203ENST00000423960 Q6ZUT4 128 aa11.3□□□□□ -0.6
FOXN4-203ENST00000423960 TOMM6Q96B49 74 aa11.3□□□□□ -0.6
FOXN4-203ENST00000423960 URB1-AS1Q96HZ7 61 aa11.3□□□□□ -0.6
FOXN4-203ENST00000423960 OPRPNQ99935 248 aaPredicted RBP11.3□□□□□ -0.6
FOXN4-203ENST00000423960 RNASE13Q5GAN3 156 aaKnown RBP11.29□□□□□ -0.6
FOXN4-203ENST00000423960 MAPKAPK5-AS1Q8N8E1 139 aa11.29□□□□□ -0.6
FOXN4-203ENST00000423960 LINC00959A0A1B0GUT2 108 aa11.28□□□□□ -0.6
FOXN4-203ENST00000423960 LINC01549A6NIU2 74 aa11.28□□□□□ -0.6
FOXN4-203ENST00000423960 FAM104AQ969W3 186 aa11.28□□□□□ -0.6
FOXN4-203ENST00000423960 PKD1P98161 4303 aa11.28□□□□□ -0.6
FOXN4-203ENST00000423960 PKHD1P08F94 4074 aa11.28□□□□□ -0.6
FOXN4-203ENST00000423960 IGLV4-3A0A075B6K6 122 aa11.27□□□□□ -0.61
FOXN4-203ENST00000423960 A0A087WTM6 91 aa11.27□□□□□ -0.61
FOXN4-203ENST00000423960 LRCOL1A6NCL2 159 aa11.27□□□□□ -0.61
FOXN4-203ENST00000423960 IGIPA6NJ69 53 aa11.27□□□□□ -0.61
FOXN4-203ENST00000423960 EREGO14944 169 aa11.27□□□□□ -0.61
FOXN4-203ENST00000423960 SS18Q15532 418 aa11.27□□□□□ -0.61
FOXN4-203ENST00000423960 KRTAP26-1Q6PEX3 210 aa11.27□□□□□ -0.61
FOXN4-203ENST00000423960 BAGE3Q86Y29 109 aa11.27□□□□□ -0.61
FOXN4-203ENST00000423960 BAALCQ8WXS3 180 aa11.27□□□□□ -0.61
FOXN4-203ENST00000423960 DNAH11Q96DT5 4516 aa11.27□□□□□ -0.61
FOXN4-203ENST00000423960 NPSP0C0P6 89 aa11.26□□□□□ -0.61
FOXN4-203ENST00000423960 CHCHD10Q8WYQ3 142 aaPredicted RBP11.26□□□□□ -0.61
FOXN4-203ENST00000423960 CHCHD1Q96BP2 118 aaKnown RBP11.26□□□□□ -0.61
FOXN4-203ENST00000423960 TMEM141Q96I45 108 aa11.26□□□□□ -0.61
FOXN4-203ENST00000423960 SCGB3A1Q96QR1 104 aa11.26□□□□□ -0.61
FOXN4-203ENST00000423960 TRAV13-1A0A0B4J241 112 aa11.25□□□□□ -0.61
FOXN4-203ENST00000423960 GAGE12HA6NDE8 117 aa11.25□□□□□ -0.61
FOXN4-203ENST00000423960 C1orf196B1AJZ1 125 aa11.25□□□□□ -0.61
FOXN4-203ENST00000423960 CCL25O15444 150 aa11.25□□□□□ -0.61
FOXN4-203ENST00000423960 ERASQ7Z444 233 aa11.25□□□□□ -0.61
FOXN4-203ENST00000423960 TIMM17AQ99595 171 aa11.25□□□□□ -0.61
FOXN4-203ENST00000423960 DYNC1H1Q14204 4646 aaKnown RBP11.24□□□□□ -0.61
FOXN4-203ENST00000423960 Q6ZN92 141 aa11.24□□□□□ -0.61
FOXN4-203ENST00000423960 VCX2Q9H322 139 aa11.24□□□□□ -0.61
FOXN4-203ENST00000423960 IFITM10A6NMD0 228 aa11.23□□□□□ -0.61
FOXN4-203ENST00000423960 LECT2O14960 151 aa11.23□□□□□ -0.61
FOXN4-203ENST00000423960 XCL1P47992 114 aa11.23□□□□□ -0.61
FOXN4-203ENST00000423960 PMCHL1Q16048 86 aa11.23□□□□□ -0.61
FOXN4-203ENST00000423960 PAPPA-AS1Q5QFB9 102 aa11.23□□□□□ -0.61
FOXN4-203ENST00000423960 TEX43Q6ZNM6 134 aa11.23□□□□□ -0.61
FOXN4-203ENST00000423960 A0A096LNJ9 63 aa11.22□□□□□ -0.61
FOXN4-203ENST00000423960 HBDP02042 147 aa11.22□□□□□ -0.61
FOXN4-203ENST00000423960 WFDC2Q14508 124 aa11.22□□□□□ -0.61
FOXN4-203ENST00000423960 AMELXQ99217 191 aa11.22□□□□□ -0.61
FOXN4-203ENST00000423960 FOXI1Q12951 378 aa11.21□□□□□ -0.61
FOXN4-203ENST00000423960 CD164L2Q6UWJ8 174 aa11.21□□□□□ -0.61
FOXN4-203ENST00000423960 C2orf88Q9BSF0 95 aa11.21□□□□□ -0.61
FOXN4-203ENST00000423960 ZC2HC1BQ5TFG8 222 aa11.2□□□□□ -0.62
FOXN4-203ENST00000423960 SPATA12Q7Z6I5 190 aa11.2□□□□□ -0.62
FOXN4-203ENST00000423960 Q8N814 137 aa11.2□□□□□ -0.62
FOXN4-203ENST00000423960 USP17L23D6RBM5 183 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.19□□□□□ -0.62
FOXN4-203ENST00000423960 HIST1H2BKO60814 126 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 HSBP1O75506 76 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 SERF1AO75920 110 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 HIST1H2BJP06899 126 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 HIST1H2BOP23527 126 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 HIST1H2BBP33778 126 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 HIST1H2BDP58876 126 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 HIST1H2BCP62807 126 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 HIST2H2BEQ16778 126 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 PDZD11Q5EBL8 140 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.19□□□□□ -0.62
FOXN4-203ENST00000423960 LINC00173Q6ZV60 143 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 HIST1H2BHQ93079 126 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 HIST1H2BNQ99877 126 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 HIST1H2BMQ99879 126 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 PGPEP1Q9NXJ5 209 aa11.19□□□□□ -0.62
FOXN4-203ENST00000423960 C14orf177Q52M58 125 aa11.18□□□□□ -0.62
FOXN4-203ENST00000423960 ATP5LO75964 103 aa11.17□□□□□ -0.62
FOXN4-203ENST00000423960 UBE2D1P51668 147 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms