RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 IGKV2D-24A0A075B6R9 120 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 ZNF727A8MUV8 499 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 UBE2L6O14933 153 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 IGLV2-8P01709 118 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 CRPP02741 224 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 NKX2-5P52952 324 aaPredicted RBP3.74□□□□□ -1.81
LINC00458-201ENST00000423442 UBE2D3P61077 147 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 UBE2D2P62837 147 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 RPL24P83731 157 aaKnown RBP3.74□□□□□ -1.81
LINC00458-201ENST00000423442 PEA15Q15121 130 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 TMEM241Q24JQ0 296 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 Q5VSD8 79 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 RASL11AQ6T310 242 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 Q6ZRN7 208 aaPredicted RBP3.74□□□□□ -1.81
LINC00458-201ENST00000423442 NIT1Q86X76 327 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 OR10G8Q8NGN5 311 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 SMIM7Q9BQ49 75 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 RNASE7Q9H1E1 156 aaKnown RBP3.74□□□□□ -1.81
LINC00458-201ENST00000423442 DPH3P1Q9H4G8 78 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 NIT2Q9NQR4 276 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 Q9UF83 564 aa3.74□□□□□ -1.81
LINC00458-201ENST00000423442 TRBV20OR9-2A0A075B6H5 130 aa3.73□□□□□ -1.81
LINC00458-201ENST00000423442 IGHV1-24A0A0C4DH33 117 aa3.73□□□□□ -1.81
LINC00458-201ENST00000423442 IGLC6P0CF74 106 aa3.73□□□□□ -1.81
LINC00458-201ENST00000423442 FAM74A3Q4VXF1 159 aa3.73□□□□□ -1.81
LINC00458-201ENST00000423442 LYPD6BQ8NI32 183 aa3.73□□□□□ -1.81
LINC00458-201ENST00000423442 FRZBQ92765 325 aa3.73□□□□□ -1.81
LINC00458-201ENST00000423442 UBE2WQ96B02 151 aa3.73□□□□□ -1.81
LINC00458-201ENST00000423442 M0QY20 66 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 NDUFS6O75380 124 aaKnown RBP3.72□□□□□ -1.81
LINC00458-201ENST00000423442 PRSS1P07477 247 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 LINC00694P0DN24 101 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 XGP55808 180 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 RAB14P61106 215 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 COTL1Q14019 142 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 MIAQ16674 131 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 AMMECR1LQ6DCA0 310 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 FAM231DQ6ZW35 169 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 Q8N814 137 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 BAALCQ8WXS3 180 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 PGLYRP4Q96LB8 373 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 FAM210AQ96ND0 272 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 TMEM243Q9BU79 118 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 SMDT1Q9H4I9 107 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 KIF25-AS1Q9Y6Z4 181 aa3.72□□□□□ -1.81
LINC00458-201ENST00000423442 A0A1B0GUT8 65 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 A0A1B0GVG6 124 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 LRCOL1A6NCL2 159 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 FAM231BA6NCW3 169 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 K7EN84 100 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 PPP1R17O96001 155 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 SMR3BP02814 79 aaPredicted RBP3.71□□□□□ -1.82
LINC00458-201ENST00000423442 PMCHP20382 165 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 GAGE6Q13070 117 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 RIGQ13278 110 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 ATRAIDQ6UW56 229 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 LINC00269Q8N2A0 174 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 TSKUQ8WUA8 353 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 DPH3Q96FX2 82 aa3.71□□□□□ -1.82
LINC00458-201ENST00000423442 RNF213Q63HN8 5207 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.7□□□□□ -1.82
LINC00458-201ENST00000423442 TRAV8-4A0A0B4J246 113 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 LECT2O14960 151 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 SRP19P09132 144 aaKnown RBP3.7□□□□□ -1.82
LINC00458-201ENST00000423442 FUSP35637 526 aaKnown RBP eCLIP3.7□□□□□ -1.82
LINC00458-201ENST00000423442 CTRLP40313 264 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 FOXA3P55318 350 aaPredicted RBP3.7□□□□□ -1.82
LINC00458-201ENST00000423442 RBX1P62877 108 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 SMAGPQ0VAQ4 97 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 IQCJQ1A5X6 159 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 MPV17L2Q567V2 206 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 ZC2HC1BQ5TFG8 222 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 LINC01551Q86U37 167 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 TMEM101Q96IK0 257 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 BTF3L4Q96K17 158 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 ST20Q9HBF5 79 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 OSTCQ9NRP0 149 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 NAT8Q9UHE5 227 aa3.7□□□□□ -1.82
LINC00458-201ENST00000423442 IGLV9-49A0A0B4J1Y8 123 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 A0A1B0GW15 77 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 HIGD1CA8MV81 97 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 H7C423 109 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 I3L3M4 83 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 NCR2O95944 276 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 HLA-DQA1P01909 254 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 S100A8P05109 93 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 REG3AQ06141 175 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 ADIRFQ15847 76 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 RNASEKQ6P5S7 137 aaKnown RBP3.69□□□□□ -1.82
LINC00458-201ENST00000423442 ENHOQ6UWT2 76 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 NTM-AS1Q6ZSK4 140 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 GATD1Q8NB37 220 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 GTSF1Q8WW33 167 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 TMEM70Q9BUB7 260 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 CNFNQ9BYD5 112 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 NAT8BQ9UHF3 227 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 DNAH8Q96JB1 4490 aa3.69□□□□□ -1.82
LINC00458-201ENST00000423442 LRP1Q07954 4544 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms