RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 USF3Q68DE3 2245 aa-0.19□□□□□ -2.44
LINC00397-201ENST00000422074 BCE1O60756 84 aa-0.19□□□□□ -2.44
LINC00397-201ENST00000422074 LSM10Q969L4 123 aaKnown RBP-0.19□□□□□ -2.44
LINC00397-201ENST00000422074 LINC00470Q9BZP3 86 aa-0.19□□□□□ -2.44
LINC00397-201ENST00000422074 URB1O60287 2271 aaKnown RBP-0.19□□□□□ -2.44
LINC00397-201ENST00000422074 STAB2Q8WWQ8 2551 aa-0.19□□□□□ -2.44
LINC00397-201ENST00000422074 CHD8Q9HCK8 2581 aa-0.19□□□□□ -2.44
LINC00397-201ENST00000422074 LPAP08519 4548 aa-0.19□□□□□ -2.44
LINC00397-201ENST00000422074 PLXNB2O15031 1838 aa-0.2□□□□□ -2.44
LINC00397-201ENST00000422074 KIF21AQ7Z4S6 1674 aa-0.2□□□□□ -2.44
LINC00397-201ENST00000422074 HECTD4Q9Y4D8 3996 aa-0.2□□□□□ -2.44
LINC00397-201ENST00000422074 MIF4GDA9UHW6 222 aaKnown RBP-0.2□□□□□ -2.44
LINC00397-201ENST00000422074 GNG7O60262 68 aa-0.2□□□□□ -2.44
LINC00397-201ENST00000422074 APOC3P02656 99 aa-0.2□□□□□ -2.44
LINC00397-201ENST00000422074 MEIG1Q5JSS6 88 aa-0.2□□□□□ -2.44
LINC00397-201ENST00000422074 FAM107BQ9H098 131 aa-0.2□□□□□ -2.44
LINC00397-201ENST00000422074 TP53AIP1Q9HCN2 124 aa-0.2□□□□□ -2.44
LINC00397-201ENST00000422074 GOLGA4Q13439 2230 aaKnown RBP-0.2□□□□□ -2.44
LINC00397-201ENST00000422074 DSTQ03001 7570 aaKnown RBP-0.21□□□□□ -2.44
LINC00397-201ENST00000422074 MUC2Q02817 5179 aa-0.21□□□□□ -2.44
LINC00397-201ENST00000422074 ATRQ13535 2644 aa-0.21□□□□□ -2.44
LINC00397-201ENST00000422074 ZNF236Q9UL36 1845 aa-0.21□□□□□ -2.44
LINC00397-201ENST00000422074 FLNBO75369 2602 aaKnown RBP-0.21□□□□□ -2.44
LINC00397-201ENST00000422074 ALMS1Q8TCU4 4167 aa-0.21□□□□□ -2.44
LINC00397-201ENST00000422074 NBEAL1Q6ZS30 2694 aa-0.21□□□□□ -2.44
LINC00397-201ENST00000422074 SETXQ7Z333 2677 aaKnown RBP-0.21□□□□□ -2.44
LINC00397-201ENST00000422074 MYO7BQ6PIF6 2116 aa-0.22□□□□□ -2.44
LINC00397-201ENST00000422074 SPRR1AP35321 89 aa-0.22□□□□□ -2.44
LINC00397-201ENST00000422074 Q6JHZ5 121 aa-0.22□□□□□ -2.44
LINC00397-201ENST00000422074 BAGE2Q86Y30 109 aa-0.22□□□□□ -2.44
LINC00397-201ENST00000422074 PPP3R2Q96LZ3 170 aa-0.22□□□□□ -2.44
LINC00397-201ENST00000422074 MGST2Q99735 147 aa-0.22□□□□□ -2.44
LINC00397-201ENST00000422074 DYNLRB1Q9NP97 96 aa-0.22□□□□□ -2.44
LINC00397-201ENST00000422074 BSNQ9UPA5 3926 aa-0.22□□□□□ -2.44
LINC00397-201ENST00000422074 MUC12Q9UKN1 5478 aa-0.22□□□□□ -2.44
LINC00397-201ENST00000422074 PI4KAP42356 2102 aa-0.22□□□□□ -2.44
LINC00397-201ENST00000422074 SBF2Q86WG5 1849 aa-0.22□□□□□ -2.45
LINC00397-201ENST00000422074 C10orf71Q711Q0 1435 aa-0.22□□□□□ -2.45
LINC00397-201ENST00000422074 CNOT1A5YKK6 2376 aaKnown RBP-0.23□□□□□ -2.45
LINC00397-201ENST00000422074 EP300Q09472 2414 aaPredicted RBP-0.23□□□□□ -2.45
LINC00397-201ENST00000422074 F8VRH5 84 aa-0.23□□□□□ -2.45
LINC00397-201ENST00000422074 UQCR11O14957 56 aa-0.23□□□□□ -2.45
LINC00397-201ENST00000422074 SPRR2DP22532 72 aa-0.23□□□□□ -2.45
LINC00397-201ENST00000422074 TPPP2P59282 170 aa-0.23□□□□□ -2.45
LINC00397-201ENST00000422074 S100A12P80511 92 aa-0.23□□□□□ -2.45
LINC00397-201ENST00000422074 PIGYQ3MUY2 71 aa-0.23□□□□□ -2.45
LINC00397-201ENST00000422074 KRTAP19-7Q3SYF9 63 aa-0.23□□□□□ -2.45
LINC00397-201ENST00000422074 NDUFA4L2Q9NRX3 87 aa-0.23□□□□□ -2.45
LINC00397-201ENST00000422074 CPSF1Q10570 1443 aaKnown RBP-0.23□□□□□ -2.45
LINC00397-201ENST00000422074 FAT2Q9NYQ8 4349 aa-0.23□□□□□ -2.45
LINC00397-201ENST00000422074 COL6A3P12111 3177 aa-0.23□□□□□ -2.45
LINC00397-201ENST00000422074 MAP1AP78559 2803 aaPredicted RBP-0.23□□□□□ -2.45
LINC00397-201ENST00000422074 LAMC1P11047 1609 aa-0.24□□□□□ -2.45
LINC00397-201ENST00000422074 TNXBP22105 4242 aa-0.24□□□□□ -2.45
LINC00397-201ENST00000422074 MYH7P12883 1935 aa-0.24□□□□□ -2.45
LINC00397-201ENST00000422074 PDZD2O15018 2839 aa-0.24□□□□□ -2.45
LINC00397-201ENST00000422074 Q56UQ5 140 aa-0.24□□□□□ -2.45
LINC00397-201ENST00000422074 AMELXQ99217 191 aa-0.24□□□□□ -2.45
LINC00397-201ENST00000422074 DNAJC13O75165 2243 aa-0.24□□□□□ -2.45
LINC00397-201ENST00000422074 TRBV6-1A0A0K0K1D8 114 aa-0.25□□□□□ -2.45
LINC00397-201ENST00000422074 TNFP01375 233 aa-0.25□□□□□ -2.45
LINC00397-201ENST00000422074 APOC2P02655 101 aa-0.25□□□□□ -2.45
LINC00397-201ENST00000422074 CATR1Q13166 79 aa-0.25□□□□□ -2.45
LINC00397-201ENST00000422074 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.25□□□□□ -2.45
LINC00397-201ENST00000422074 BCL9LQ86UU0 1499 aa-0.25□□□□□ -2.45
LINC00397-201ENST00000422074 RIMS1Q86UR5 1692 aaKnown RBP-0.25□□□□□ -2.45
LINC00397-201ENST00000422074 FOCADQ5VW36 1801 aa-0.25□□□□□ -2.45
LINC00397-201ENST00000422074 NF1P21359 2839 aa-0.25□□□□□ -2.45
LINC00397-201ENST00000422074 CREBBPQ92793 2442 aa-0.26□□□□□ -2.45
LINC00397-201ENST00000422074 PAPPAQ13219 1627 aa-0.26□□□□□ -2.45
LINC00397-201ENST00000422074 MBD5Q9P267 1494 aa-0.26□□□□□ -2.45
LINC00397-201ENST00000422074 TRBV7-3A0A075B6L6 115 aa-0.26□□□□□ -2.45
LINC00397-201ENST00000422074 NDUFA2O43678 99 aa-0.26□□□□□ -2.45
LINC00397-201ENST00000422074 IFNGP01579 166 aa-0.26□□□□□ -2.45
LINC00397-201ENST00000422074 C8orf59Q8N0T1 100 aaPredicted RBP-0.26□□□□□ -2.45
LINC00397-201ENST00000422074 TSLPQ969D9 159 aa-0.26□□□□□ -2.45
LINC00397-201ENST00000422074 LOC285095A0A1B0GVY8 99 aa-0.27□□□□□ -2.45
LINC00397-201ENST00000422074 IGLC7A0M8Q6 106 aa-0.27□□□□□ -2.45
LINC00397-201ENST00000422074 PRM1P04553 51 aa-0.27□□□□□ -2.45
LINC00397-201ENST00000422074 FGF7P21781 194 aa-0.27□□□□□ -2.45
LINC00397-201ENST00000422074 BTG2P78543 158 aa-0.27□□□□□ -2.45
LINC00397-201ENST00000422074 MYOZ3Q8TDC0 251 aa-0.27□□□□□ -2.45
LINC00397-201ENST00000422074 TSC2P49815 1807 aa-0.27□□□□□ -2.45
LINC00397-201ENST00000422074 KTN1Q86UP2 1357 aaKnown RBP-0.28□□□□□ -2.45
LINC00397-201ENST00000422074 LOC730098B7Z3J9 87 aa-0.28□□□□□ -2.45
LINC00397-201ENST00000422074 I3L2K1 104 aa-0.28□□□□□ -2.45
LINC00397-201ENST00000422074 HMGN4O00479 90 aa-0.28□□□□□ -2.45
LINC00397-201ENST00000422074 SSSCA1O60232 199 aa-0.28□□□□□ -2.45
LINC00397-201ENST00000422074 WDR7Q9Y4E6 1490 aa-0.29□□□□□ -2.46
LINC00397-201ENST00000422074 K7EQZ3 153 aa-0.29□□□□□ -2.46
LINC00397-201ENST00000422074 HMGN1P05114 100 aa-0.29□□□□□ -2.46
LINC00397-201ENST00000422074 COMMD6Q7Z4G1 85 aa-0.29□□□□□ -2.46
LINC00397-201ENST00000422074 C1orf54Q8WWF1 131 aa-0.29□□□□□ -2.46
LINC00397-201ENST00000422074 SPANXDQ9BXN6 97 aa-0.29□□□□□ -2.46
LINC00397-201ENST00000422074 LINC00472Q9H8W2 130 aa-0.29□□□□□ -2.46
LINC00397-201ENST00000422074 LINC01558Q9Y6Z2 57 aa-0.29□□□□□ -2.46
LINC00397-201ENST00000422074 SHANK2Q9UPX8 1470 aa-0.29□□□□□ -2.46
LINC00397-201ENST00000422074 RAPGEF6Q8TEU7 1601 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 LRP1BQ9NZR2 4599 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 TGP01266 2768 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms